More than 300 homologs were found in PanDaTox collection
for query gene Rfer_3023 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007908  Rfer_3023  methyl-accepting chemotaxis sensory transducer  100 
 
 
537 aa  1072    Rhodoferax ferrireducens T118  Bacteria  normal  0.112114  n/a   
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  54.93 
 
 
559 aa  365  1e-100  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  61.3 
 
 
542 aa  356  5e-97  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  49.65 
 
 
583 aa  351  2e-95  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_008782  Ajs_2152  methyl-accepting chemotaxis sensory transducer  45.61 
 
 
589 aa  350  4e-95  Acidovorax sp. JS42  Bacteria  normal  normal  0.0117525 
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  47.88 
 
 
543 aa  349  9e-95  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  50.11 
 
 
596 aa  347  4e-94  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  44.13 
 
 
572 aa  344  2e-93  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  60.53 
 
 
589 aa  339  8e-92  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  50.48 
 
 
559 aa  338  1.9999999999999998e-91  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_1951  methyl-accepting chemotaxis sensory transducer  49.29 
 
 
508 aa  335  1e-90  Acidovorax sp. JS42  Bacteria  normal  normal  0.747742 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  59.63 
 
 
585 aa  335  2e-90  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  50.99 
 
 
577 aa  334  2e-90  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  42.67 
 
 
535 aa  333  5e-90  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  58.9 
 
 
569 aa  333  5e-90  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  49.88 
 
 
557 aa  333  6e-90  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_1752  methyl-accepting chemotaxis sensory transducer  43.39 
 
 
523 aa  332  9e-90  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  55.56 
 
 
580 aa  332  2e-89  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  48.74 
 
 
552 aa  331  2e-89  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4184  methyl-accepting chemotaxis sensory transducer  62.33 
 
 
680 aa  331  2e-89  Variovorax paradoxus S110  Bacteria  normal  0.12793  n/a   
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  60.6 
 
 
573 aa  330  3e-89  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  42.17 
 
 
549 aa  330  5.0000000000000004e-89  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  45.1 
 
 
513 aa  330  5.0000000000000004e-89  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  63.32 
 
 
589 aa  329  6e-89  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  54.32 
 
 
578 aa  329  8e-89  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_007908  Rfer_2354  methyl-accepting chemotaxis sensory transducer  55.98 
 
 
554 aa  328  2.0000000000000001e-88  Rhodoferax ferrireducens T118  Bacteria  normal  0.547249  n/a   
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  61.97 
 
 
592 aa  328  2.0000000000000001e-88  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  47.89 
 
 
584 aa  327  4.0000000000000003e-88  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0407  methyl-accepting chemotaxis sensory transducer  49.65 
 
 
525 aa  327  4.0000000000000003e-88  Acidovorax citrulli AAC00-1  Bacteria  normal  0.770374  normal 
 
 
-
 
NC_007348  Reut_B3731  methyl-accepting chemotaxis sensory transducer  43.64 
 
 
513 aa  325  1e-87  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  58.7 
 
 
587 aa  324  2e-87  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_011992  Dtpsy_2969  methyl-accepting chemotaxis sensory transducer  56.47 
 
 
550 aa  323  4e-87  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4703  methyl-accepting chemotaxis sensory transducer  62.41 
 
 
659 aa  323  4e-87  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0995  methyl-accepting chemotaxis sensory transducer  64.31 
 
 
621 aa  323  4e-87  Ralstonia pickettii 12J  Bacteria  normal  normal  0.203772 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  58.07 
 
 
527 aa  323  5e-87  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_008752  Aave_2284  methyl-accepting chemotaxis sensory transducer  55.31 
 
 
547 aa  323  7e-87  Acidovorax citrulli AAC00-1  Bacteria  normal  0.206976  hitchhiker  0.0000952985 
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  60.65 
 
 
650 aa  322  9.999999999999999e-87  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_003295  RSc1155  methyl-accepting chemotaxis transducer transmembrane protein  65.99 
 
 
629 aa  321  1.9999999999999998e-86  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.852924 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  41.85 
 
 
579 aa  321  1.9999999999999998e-86  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010002  Daci_3834  methyl-accepting chemotaxis sensory transducer  47.59 
 
 
595 aa  321  1.9999999999999998e-86  Delftia acidovorans SPH-1  Bacteria  normal  0.10184  normal  0.0113192 
 
 
-
 
NC_012856  Rpic12D_1091  methyl-accepting chemotaxis sensory transducer with Cache sensor  64.31 
 
 
618 aa  321  1.9999999999999998e-86  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  47.47 
 
 
586 aa  321  3e-86  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_008825  Mpe_A0335  methyl-accepting chemotaxis protein I  58.23 
 
 
394 aa  321  3e-86  Methylibium petroleiphilum PM1  Bacteria  normal  0.809135  normal  0.684623 
 
 
-
 
NC_008782  Ajs_3659  methyl-accepting chemotaxis sensory transducer  56.18 
 
 
550 aa  320  5e-86  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  58.68 
 
 
532 aa  320  6e-86  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_008752  Aave_0104  methyl-accepting chemotaxis sensory transducer  60.14 
 
 
622 aa  319  7e-86  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  58.2 
 
 
591 aa  319  7.999999999999999e-86  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_008752  Aave_1405  methyl-accepting chemotaxis sensory transducer  48.64 
 
 
548 aa  319  7.999999999999999e-86  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4185  methyl-accepting chemotaxis sensory transducer  50.78 
 
 
579 aa  319  9e-86  Variovorax paradoxus S110  Bacteria  normal  0.356775  n/a   
 
 
-
 
NC_008782  Ajs_1017  methyl-accepting chemotaxis sensory transducer  58.2 
 
 
591 aa  318  1e-85  Acidovorax sp. JS42  Bacteria  normal  0.696887  normal 
 
 
-
 
NC_011992  Dtpsy_0178  methyl-accepting chemotaxis sensory transducer  49.53 
 
 
581 aa  318  1e-85  Acidovorax ebreus TPSY  Bacteria  normal  0.62004  n/a   
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  53.45 
 
 
537 aa  318  1e-85  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_010681  Bphyt_2259  methyl-accepting chemotaxis sensory transducer  55.84 
 
 
588 aa  318  1e-85  Burkholderia phytofirmans PsJN  Bacteria  normal  0.131825  normal  0.497854 
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  40.92 
 
 
584 aa  318  1e-85  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_008782  Ajs_0160  methyl-accepting chemotaxis sensory transducer  49.53 
 
 
579 aa  318  2e-85  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_003296  RSp1406  methyl-accepting chemotaxis I  49.29 
 
 
608 aa  317  3e-85  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.13211 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  61.84 
 
 
598 aa  317  3e-85  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  62.76 
 
 
615 aa  317  4e-85  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_010002  Daci_0036  methyl-accepting chemotaxis sensory transducer  60.41 
 
 
567 aa  317  4e-85  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_0400  methyl-accepting chemotaxis sensory transducer  55.16 
 
 
602 aa  317  4e-85  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0817302 
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  62.76 
 
 
615 aa  317  4e-85  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  55.89 
 
 
579 aa  316  6e-85  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_012917  PC1_3464  methyl-accepting chemotaxis sensory transducer  48.61 
 
 
551 aa  316  6e-85  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_0687  methyl-accepting chemotaxis sensory transducer  58.97 
 
 
433 aa  316  7e-85  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2081  methyl-accepting chemotaxis sensory transducer  48.96 
 
 
668 aa  315  9.999999999999999e-85  Dickeya dadantii Ech703  Bacteria  normal  0.622232  n/a   
 
 
-
 
NC_013421  Pecwa_3618  methyl-accepting chemotaxis sensory transducer  48.61 
 
 
551 aa  315  9.999999999999999e-85  Pectobacterium wasabiae WPP163  Bacteria  normal  0.453306  n/a   
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  53.94 
 
 
653 aa  314  1.9999999999999998e-84  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  58.2 
 
 
584 aa  315  1.9999999999999998e-84  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  53.94 
 
 
653 aa  314  1.9999999999999998e-84  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  51.72 
 
 
532 aa  314  1.9999999999999998e-84  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  63.3 
 
 
566 aa  315  1.9999999999999998e-84  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_013421  Pecwa_2019  methyl-accepting chemotaxis sensory transducer  45.8 
 
 
644 aa  314  2.9999999999999996e-84  Pectobacterium wasabiae WPP163  Bacteria  normal  0.858801  n/a   
 
 
-
 
NC_007908  Rfer_2789  methyl-accepting chemotaxis sensory transducer  57.89 
 
 
529 aa  313  2.9999999999999996e-84  Rhodoferax ferrireducens T118  Bacteria  normal  0.017789  n/a   
 
 
-
 
NC_010524  Lcho_1600  methyl-accepting chemotaxis sensory transducer  53.53 
 
 
594 aa  314  2.9999999999999996e-84  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.00034667 
 
 
-
 
NC_008825  Mpe_A2548  methyl-accepting chemotaxis protein  55.15 
 
 
525 aa  314  2.9999999999999996e-84  Methylibium petroleiphilum PM1  Bacteria  decreased coverage  0.00975221  normal  0.500866 
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.94 
 
 
515 aa  313  3.9999999999999997e-84  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_007348  Reut_B5597  methyl-accepting chemotaxis sensory transducer  53.14 
 
 
570 aa  313  3.9999999999999997e-84  Ralstonia eutropha JMP134  Bacteria  normal  0.253624  n/a   
 
 
-
 
NC_003296  RSp0507  methyl-accepting chemotaxis I  54.78 
 
 
600 aa  313  4.999999999999999e-84  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  62.76 
 
 
586 aa  313  4.999999999999999e-84  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_008752  Aave_2496  methyl-accepting chemotaxis sensory transducer  56.21 
 
 
537 aa  313  4.999999999999999e-84  Acidovorax citrulli AAC00-1  Bacteria  decreased coverage  0.00000862286  decreased coverage  0.00394801 
 
 
-
 
NC_010002  Daci_0172  methyl-accepting chemotaxis sensory transducer  64.6 
 
 
550 aa  313  6.999999999999999e-84  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  42.94 
 
 
515 aa  313  6.999999999999999e-84  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_012791  Vapar_4183  methyl-accepting chemotaxis sensory transducer  51.65 
 
 
516 aa  312  1e-83  Variovorax paradoxus S110  Bacteria  normal  0.278563  n/a   
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  60.14 
 
 
597 aa  312  1e-83  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2436  methyl-accepting chemotaxis sensory transducer  61.22 
 
 
539 aa  311  1e-83  Acidovorax citrulli AAC00-1  Bacteria  normal  0.633872  normal 
 
 
-
 
NC_003295  RSc2799  putative methyl-accepting chemotaxis transmembrane protein  56.72 
 
 
515 aa  311  2e-83  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00825356  normal  0.849966 
 
 
-
 
NC_003295  RSc3412  putative methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein  59.18 
 
 
515 aa  311  2e-83  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.934147 
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  57.19 
 
 
551 aa  311  2e-83  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_007908  Rfer_3610  methyl-accepting chemotaxis sensory transducer  50.7 
 
 
511 aa  311  2e-83  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  61.99 
 
 
559 aa  310  2.9999999999999997e-83  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  57.59 
 
 
584 aa  310  4e-83  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_007951  Bxe_A2002  methyl-accepting chemotaxis sensory transducer  54.73 
 
 
601 aa  310  4e-83  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc0606  putative methyl-accepting chemotaxis transmembrane protein  64.31 
 
 
617 aa  310  5e-83  Ralstonia solanacearum GMI1000  Bacteria  normal  0.535208  normal  0.212062 
 
 
-
 
NC_012856  Rpic12D_0523  methyl-accepting chemotaxis sensory transducer with Cache sensor  66.4 
 
 
608 aa  310  5e-83  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0536  methyl-accepting chemotaxis sensory transducer with Cache sensor  66.4 
 
 
609 aa  309  5.9999999999999995e-83  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2241  methyl-accepting chemotaxis sensory transducer  57.45 
 
 
536 aa  309  6.999999999999999e-83  Acidovorax citrulli AAC00-1  Bacteria  unclonable  0.000000611014  hitchhiker  0.00000521325 
 
 
-
 
NC_012917  PC1_2526  methyl-accepting chemotaxis sensory transducer  53.2 
 
 
554 aa  309  9e-83  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  45.9 
 
 
554 aa  309  9e-83  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_007974  Rmet_3683  methyl-accepting chemotaxis sensory transducer  42.88 
 
 
613 aa  309  9e-83  Cupriavidus metallidurans CH34  Bacteria  normal  0.755698  normal  0.0578518 
 
 
-
 
NC_008752  Aave_0831  methyl-accepting chemotaxis sensory transducer  54.71 
 
 
561 aa  309  9e-83  Acidovorax citrulli AAC00-1  Bacteria  normal  0.236088  normal  0.180731 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>