More than 300 homologs were found in PanDaTox collection
for query gene Cfla_0049 on replicon NC_014151
Organism: Cellulomonas flavigena DSM 20109



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014151  Cfla_0049  two component transcriptional regulator, LuxR family  100 
 
 
233 aa  462  1e-129  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0384611  normal  0.0476146 
 
 
-
 
NC_009921  Franean1_2216  two component LuxR family transcriptional regulator  36.54 
 
 
211 aa  120  1.9999999999999998e-26  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.00683516  normal  0.0356101 
 
 
-
 
NC_009664  Krad_1090  two component transcriptional regulator, LuxR family  37.67 
 
 
224 aa  113  2.0000000000000002e-24  Kineococcus radiotolerans SRS30216  Bacteria  hitchhiker  0.00274111  normal 
 
 
-
 
NC_007777  Francci3_1680  two component LuxR family transcriptional regulator  35.43 
 
 
229 aa  96.7  3e-19  Frankia sp. CcI3  Bacteria  normal  0.128873  normal  0.734397 
 
 
-
 
NC_013235  Namu_4835  response regulator receiver protein  38.79 
 
 
212 aa  91.7  9e-18  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008010  Dgeo_2486  two component LuxR family transcriptional regulator  35.6 
 
 
208 aa  90.9  1e-17  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2171  two component transcriptional regulator, LuxR family  34.34 
 
 
227 aa  85.5  6e-16  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_29940  two component transcriptional regulator, LuxR family  35.48 
 
 
234 aa  85.5  6e-16  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.683883 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  30.73 
 
 
234 aa  84.3  0.000000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0224272 
 
 
-
 
NC_008740  Maqu_3089  two component LuxR family transcriptional regulator  32.82 
 
 
219 aa  83.6  0.000000000000002  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011758  Mchl_5446  two component transcriptional regulator, LuxR family  33.88 
 
 
218 aa  84  0.000000000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.26634  normal 
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  36.96 
 
 
207 aa  83.2  0.000000000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.966789 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  30.48 
 
 
237 aa  82.4  0.000000000000005  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  31.07 
 
 
253 aa  82.4  0.000000000000005  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  32.82 
 
 
213 aa  82  0.000000000000007  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2443  two component LuxR family transcriptional regulator  33.85 
 
 
215 aa  81.3  0.00000000000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_0642  two component transcriptional regulator, LuxR family  33.51 
 
 
208 aa  81.3  0.00000000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  31.84 
 
 
303 aa  81.6  0.00000000000001  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.887336 
 
 
-
 
NC_007925  RPC_1904  two component LuxR family transcriptional regulator  34.01 
 
 
218 aa  80.5  0.00000000000002  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0420846  normal 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  28.64 
 
 
216 aa  80.5  0.00000000000002  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_2340  two component transcriptional regulator, LuxR family  38.02 
 
 
217 aa  80.5  0.00000000000002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.273151  normal 
 
 
-
 
NC_004347  SO_3982  DNA-binding nitrate/nitrite response regulator  32.11 
 
 
209 aa  79.7  0.00000000000003  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  40.13 
 
 
225 aa  79.7  0.00000000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013530  Xcel_0606  two component transcriptional regulator, LuxR family  35.05 
 
 
212 aa  79.7  0.00000000000004  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  35.32 
 
 
224 aa  79  0.00000000000005  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  30.05 
 
 
238 aa  79.3  0.00000000000005  Frankia sp. CcI3  Bacteria  normal  normal  0.135118 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  31.84 
 
 
250 aa  79.3  0.00000000000005  Frankia sp. EAN1pec  Bacteria  normal  normal  0.631776 
 
 
-
 
NC_009439  Pmen_0083  two component LuxR family transcriptional regulator  32.71 
 
 
210 aa  79  0.00000000000006  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0513  two component transcriptional regulator, LuxR family  40.86 
 
 
209 aa  78.6  0.00000000000007  Actinosynnema mirum DSM 43827  Bacteria  normal  0.52986  n/a   
 
 
-
 
NC_009953  Sare_3939  two component LuxR family transcriptional regulator  33.49 
 
 
229 aa  78.2  0.00000000000009  Salinispora arenicola CNS-205  Bacteria  normal  0.203044  normal  0.164365 
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  32.98 
 
 
207 aa  78.2  0.0000000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  30.84 
 
 
236 aa  77.8  0.0000000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_013501  Rmar_1005  two component transcriptional regulator, LuxR family  31.55 
 
 
211 aa  78.2  0.0000000000001  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1936  response regulator receiver protein  34.04 
 
 
205 aa  77  0.0000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  29.52 
 
 
237 aa  77.4  0.0000000000002  Frankia sp. CcI3  Bacteria  normal  0.272345  normal 
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  37.31 
 
 
210 aa  77  0.0000000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  30.28 
 
 
234 aa  77.4  0.0000000000002  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.336237 
 
 
-
 
NC_008321  Shewmr4_0657  two component LuxR family transcriptional regulator  32.11 
 
 
209 aa  77.4  0.0000000000002  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000000493749  normal  0.229808 
 
 
-
 
NC_008322  Shewmr7_3365  two component LuxR family transcriptional regulator  32.11 
 
 
209 aa  77.4  0.0000000000002  Shewanella sp. MR-7  Bacteria  hitchhiker  0.0000651556  normal  0.0242167 
 
 
-
 
NC_008577  Shewana3_0656  two component LuxR family transcriptional regulator  32.11 
 
 
209 aa  77.4  0.0000000000002  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.000000830399  normal  0.140804 
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  31.61 
 
 
213 aa  77  0.0000000000002  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_014151  Cfla_2683  two component transcriptional regulator, LuxR family  35.26 
 
 
209 aa  77  0.0000000000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3380  two component transcriptional regulator, LuxR family  34.65 
 
 
222 aa  76.6  0.0000000000003  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011662  Tmz1t_4012  transcriptional regulator NarL  34.34 
 
 
214 aa  76.6  0.0000000000003  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_3724  response regulator receiver  32.26 
 
 
231 aa  76.6  0.0000000000003  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0228  LuxR family two component transcriptional regulator  32.29 
 
 
206 aa  76.6  0.0000000000003  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_014213  Mesil_3486  hypothetical protein  37.58 
 
 
206 aa  76.6  0.0000000000003  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0842  two component LuxR family transcriptional regulator  31.22 
 
 
209 aa  76.6  0.0000000000003  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00000336278  normal 
 
 
-
 
NC_009901  Spea_0829  two component LuxR family transcriptional regulator  30.69 
 
 
209 aa  76.6  0.0000000000003  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00236991  n/a   
 
 
-
 
NC_007412  Ava_C0116  two component LuxR family transcriptional regulator  32.64 
 
 
209 aa  76.3  0.0000000000004  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_1784  two component LuxR family transcriptional regulator  33.68 
 
 
224 aa  76.3  0.0000000000004  Paracoccus denitrificans PD1222  Bacteria  hitchhiker  0.000422915  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  36.49 
 
 
218 aa  76.3  0.0000000000004  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_011894  Mnod_0851  two component transcriptional regulator, LuxR family  33.16 
 
 
232 aa  75.9  0.0000000000005  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  34.3 
 
 
225 aa  75.9  0.0000000000005  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_007204  Psyc_0602  nitrate/nitrite response regulator  31.55 
 
 
219 aa  75.5  0.0000000000006  Psychrobacter arcticus 273-4  Bacteria  normal  0.790372  normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  34.8 
 
 
226 aa  75.5  0.0000000000006  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_009665  Shew185_3713  two component LuxR family transcriptional regulator  31.05 
 
 
209 aa  75.5  0.0000000000007  Shewanella baltica OS185  Bacteria  hitchhiker  0.000000000161759  n/a   
 
 
-
 
NC_013172  Bfae_00310  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  33.33 
 
 
213 aa  75.5  0.0000000000007  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0792  two component LuxR family transcriptional regulator  31.05 
 
 
209 aa  75.5  0.0000000000007  Shewanella baltica OS155  Bacteria  hitchhiker  0.000000151034  n/a   
 
 
-
 
NC_009997  Sbal195_3836  two component LuxR family transcriptional regulator  31.05 
 
 
209 aa  75.5  0.0000000000007  Shewanella baltica OS195  Bacteria  hitchhiker  0.00000136397  normal  0.0231387 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  31.48 
 
 
242 aa  75.1  0.0000000000008  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_013235  Namu_3632  two component transcriptional regulator, LuxR family  34.39 
 
 
209 aa  75.1  0.0000000000008  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00835522  normal  0.0174868 
 
 
-
 
NC_013131  Caci_7346  two component transcriptional regulator, LuxR family  38.22 
 
 
211 aa  75.1  0.0000000000008  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0451998 
 
 
-
 
NC_011138  MADE_03853  transcriptional regulator NarL  29.74 
 
 
217 aa  75.1  0.0000000000009  Alteromonas macleodii 'Deep ecotype'  Bacteria  unclonable  0.0000020037  n/a   
 
 
-
 
NC_010465  YPK_2269  two component LuxR family transcriptional regulator  28.87 
 
 
210 aa  75.1  0.0000000000009  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3654  two component transcriptional regulator, LuxR family  31.05 
 
 
209 aa  75.1  0.0000000000009  Shewanella baltica OS223  Bacteria  unclonable  0.000000000464283  hitchhiker  0.00000781977 
 
 
-
 
NC_013159  Svir_22850  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  34.36 
 
 
239 aa  75.1  0.0000000000009  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.711047 
 
 
-
 
NC_008700  Sama_0646  response regulator receiver protein  32.11 
 
 
209 aa  75.1  0.0000000000009  Shewanella amazonensis SB2B  Bacteria  normal  0.0492071  normal 
 
 
-
 
NC_009708  YpsIP31758_2160  LuxR family DNA-binding response regulator  28.87 
 
 
210 aa  75.1  0.0000000000009  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0621  two component LuxR family transcriptional regulator  32.61 
 
 
212 aa  74.7  0.000000000001  Caulobacter sp. K31  Bacteria  normal  normal  0.881689 
 
 
-
 
NC_013037  Dfer_1698  two component transcriptional regulator, LuxR family  32.45 
 
 
207 aa  74.7  0.000000000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.126193 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  34.63 
 
 
227 aa  74.7  0.000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_010506  Swoo_0970  two component LuxR family transcriptional regulator  30.69 
 
 
209 aa  74.3  0.000000000002  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0307407  normal 
 
 
-
 
NC_003910  CPS_1260  putative nitrate/nitrite DNA-binding response regulator  31.55 
 
 
206 aa  73.9  0.000000000002  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2674  two component LuxR family transcriptional regulator  35.25 
 
 
215 aa  73.6  0.000000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.721789  n/a   
 
 
-
 
NC_010159  YpAngola_A2113  LuxR family DNA-binding response regulator  28.87 
 
 
210 aa  73.9  0.000000000002  Yersinia pestis Angola  Bacteria  normal  normal  0.616678 
 
 
-
 
NC_011369  Rleg2_1389  two component transcriptional regulator, LuxR family  30.89 
 
 
206 aa  74.3  0.000000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.744509  normal 
 
 
-
 
NC_012853  Rleg_5633  two component transcriptional regulator, LuxR family  32.62 
 
 
203 aa  73.9  0.000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.603295  normal 
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  27.1 
 
 
215 aa  73.9  0.000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_5014  two component LuxR family transcriptional regulator  29.63 
 
 
209 aa  73.9  0.000000000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.103708  normal  0.29037 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  32.21 
 
 
228 aa  73.9  0.000000000002  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_2881  response regulator receiver  33.33 
 
 
220 aa  73.9  0.000000000002  Gordonia bronchialis DSM 43247  Bacteria  decreased coverage  0.00126066  n/a   
 
 
-
 
NC_009664  Krad_1350  two component transcriptional regulator, LuxR family  32.86 
 
 
249 aa  73.9  0.000000000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.691965  normal 
 
 
-
 
NC_007333  Tfu_2950  LuxR response regulator receiver  32.34 
 
 
221 aa  73.2  0.000000000003  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  33.5 
 
 
229 aa  73.2  0.000000000003  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1669  two component LuxR family transcriptional regulator  35.22 
 
 
221 aa  73.6  0.000000000003  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  33.5 
 
 
222 aa  73.6  0.000000000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
NC_010552  BamMC406_5498  two component LuxR family transcriptional regulator  32.18 
 
 
214 aa  73.2  0.000000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  hitchhiker  0.00509748 
 
 
-
 
NC_008061  Bcen_5187  two component LuxR family transcriptional regulator  32.18 
 
 
214 aa  72.8  0.000000000004  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5672  two component LuxR family transcriptional regulator  32.18 
 
 
214 aa  72.8  0.000000000004  Burkholderia cenocepacia HI2424  Bacteria  normal  hitchhiker  0.00685344 
 
 
-
 
NC_010515  Bcenmc03_4563  two component LuxR family transcriptional regulator  32.18 
 
 
214 aa  72.8  0.000000000004  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0560765 
 
 
-
 
NC_009831  Ssed_0905  putative nitrate/nitrite DNA-binding response regulator  30.21 
 
 
206 aa  72.8  0.000000000004  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0826046  hitchhiker  0.00000533581 
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  27.98 
 
 
213 aa  72.8  0.000000000004  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  33.5 
 
 
226 aa  72.4  0.000000000005  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_009767  Rcas_1355  two component LuxR family transcriptional regulator  29.7 
 
 
230 aa  72.4  0.000000000005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_4946  two component LuxR family transcriptional regulator  32.18 
 
 
214 aa  72.4  0.000000000005  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0203352 
 
 
-
 
NC_014158  Tpau_2414  two component transcriptional regulator, LuxR family  37.24 
 
 
215 aa  72.8  0.000000000005  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_3372  two component LuxR family transcriptional regulator  33.15 
 
 
212 aa  72.4  0.000000000006  Opitutus terrae PB90-1  Bacteria  normal  normal  0.383896 
 
 
-
 
NC_012912  Dd1591_1848  transcriptional regulator NarL  31.44 
 
 
215 aa  72.4  0.000000000006  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_2926  two component LuxR family transcriptional regulator  31.88 
 
 
223 aa  72  0.000000000006  Opitutus terrae PB90-1  Bacteria  normal  0.380263  normal 
 
 
-
 
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