Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_0621 |
Symbol | |
ID | 5898076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 686521 |
End bp | 687159 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641561103 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_001682252 |
Protein GI | 167644589 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.881689 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCG CCCCGCCCAG TTCGGAGATT CGCGTCCTGG TCGTCGATGA CCATCCGATG CTGCGCGAAG GCGTGGCGGC GGTGCTGGCG CTGCAGCCCG ACATGACGCT GATCGGCGAG GCCGAGAACG GCGCCGAGGC CATCGCGCGT TTCCGGGAGC TGCGGCCGGA CGTGACGCTG ATGGACCTGC AAATGCCGGG GACGAACGGG CTCGAGGCCA TCCAGGCCAT CCGCGCCGAA TTCCCCAACG CCAAGATCGT GGTGCTGACC ACCTATGCCG GCGACGCCCA GGCCCTGCGC GCCCTGAAGG CCGGAGCCAC CGGCTACCTG CTCAAGAGCA CCCTCCGCCG TGAGCTGCTC GACACCATCC GCAATGTCCA CGCCGGCCGC CGCCACCTGC AGTCCGAGGT CGCCCACGAG ATCGCGATCC ACGCCATCGA CGAGGCGCTC AGTGAACGCG AGGCCCACGT GTTGCGCCTG GTGGCGGCCG GGCGGGCCAA CAAGCAGATC GCCTGGGAGC TGTCGCTGTC GGAAGACACC GTCAAGGCGC ACCTGAAGAG CATCTTCGCC AAGCTGGATG TGGCCGATCG CACCCACGCC GTCACCATCG CGGCGCGGCG CGGCATCATC GAGATCTGA
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Protein sequence | MTAAPPSSEI RVLVVDDHPM LREGVAAVLA LQPDMTLIGE AENGAEAIAR FRELRPDVTL MDLQMPGTNG LEAIQAIRAE FPNAKIVVLT TYAGDAQALR ALKAGATGYL LKSTLRRELL DTIRNVHAGR RHLQSEVAHE IAIHAIDEAL SEREAHVLRL VAAGRANKQI AWELSLSEDT VKAHLKSIFA KLDVADRTHA VTIAARRGII EI
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