More than 300 homologs were found in PanDaTox collection
for query gene Tmel_0582 on replicon NC_009616
Organism: Thermosipho melanesiensis BI429



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009616  Tmel_0582  cobalamin B12-binding domain-containing protein  100 
 
 
133 aa  266  5e-71  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_1322  cobalamin B12-binding domain-containing protein  80.8 
 
 
136 aa  210  5.999999999999999e-54  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0550  cobalamin B12-binding domain-containing protein  66.67 
 
 
133 aa  188  2.9999999999999997e-47  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1673  cobalamin B12-binding domain protein  70.4 
 
 
153 aa  178  2e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_014212  Mesil_1715  cobalamin B12-binding domain protein  67.72 
 
 
139 aa  173  6e-43  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013926  Aboo_1359  cobalamin B12-binding domain protein  66.67 
 
 
128 aa  173  9e-43  Aciduliprofundum boonei T469  Archaea  hitchhiker  0.000000000160657  n/a   
 
 
-
 
NC_013946  Mrub_1574  cobalamin B12-binding domain-containing protein  66.14 
 
 
137 aa  169  1e-41  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.0630027 
 
 
-
 
CP001800  Ssol_0081  cobalamin B12-binding domain protein  61.11 
 
 
141 aa  165  2e-40  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_009380  Strop_3814  cobalamin B12-binding domain-containing protein  59.06 
 
 
134 aa  164  2.9999999999999998e-40  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_1432  methylmalonyl-CoA mutase  64.29 
 
 
140 aa  164  4e-40  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.329321 
 
 
-
 
NC_008148  Rxyl_2369  methylmalonyl-CoA mutase-like protein  60.63 
 
 
133 aa  163  8e-40  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.308524  n/a   
 
 
-
 
NC_009953  Sare_4204  cobalamin B12-binding domain-containing protein  58.27 
 
 
134 aa  162  1.0000000000000001e-39  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00605014 
 
 
-
 
NC_011831  Cagg_0587  cobalamin B12-binding domain protein  63.78 
 
 
135 aa  162  2.0000000000000002e-39  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.901029 
 
 
-
 
NC_007517  Gmet_1574  methylmalonyl-CoA mutase-like  59.52 
 
 
134 aa  160  4.0000000000000004e-39  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000332572  normal  0.305791 
 
 
-
 
NC_009675  Anae109_1989  cobalamin B12-binding domain-containing protein  61.6 
 
 
139 aa  160  7e-39  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_1854  cobalamin B12-binding domain-containing protein  64.52 
 
 
137 aa  159  8.000000000000001e-39  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0377  methylmalonyl-CoA mutase-like  57.69 
 
 
158 aa  159  1e-38  Acidothermus cellulolyticus 11B  Bacteria  normal  0.99713  normal 
 
 
-
 
NC_011146  Gbem_2691  cobalamin B12-binding domain protein  59.69 
 
 
134 aa  157  4e-38  Geobacter bemidjiensis Bem  Bacteria  normal  0.0118523  n/a   
 
 
-
 
NC_002939  GSU1578  B12-binding protein  61.11 
 
 
134 aa  157  5e-38  Geobacter sulfurreducens PCA  Bacteria  normal  0.432317  n/a   
 
 
-
 
NC_014210  Ndas_0059  cobalamin B12-binding domain protein  57.14 
 
 
136 aa  157  5e-38  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  hitchhiker  0.000107152 
 
 
-
 
NC_013595  Sros_1242  methylmalonyl-CoA mutase  60.8 
 
 
135 aa  156  7e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  hitchhiker  0.00778509 
 
 
-
 
NC_008609  Ppro_0388  cobalamin B12-binding domain-containing protein  61.6 
 
 
134 aa  157  7e-38  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.000031654  n/a   
 
 
-
 
NC_009483  Gura_3482  cobalamin B12-binding domain-containing protein  58.73 
 
 
134 aa  156  8e-38  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7994  cobalamin B12-binding domain protein  61.98 
 
 
135 aa  156  9e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_2098  cobalamin B12-binding domain protein  60 
 
 
140 aa  156  9e-38  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1832  methylmalonyl-CoA mutase  60 
 
 
140 aa  156  1e-37  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.436511  n/a   
 
 
-
 
NC_011145  AnaeK_2028  cobalamin B12-binding domain protein  60 
 
 
140 aa  156  1e-37  Anaeromyxobacter sp. K  Bacteria  normal  0.655901  n/a   
 
 
-
 
NC_012918  GM21_1548  cobalamin B12-binding domain protein  58.91 
 
 
134 aa  155  1e-37  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000166361 
 
 
-
 
NC_009483  Gura_2026  cobalamin B12-binding domain-containing protein  60.8 
 
 
134 aa  156  1e-37  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000113125  n/a   
 
 
-
 
NC_013739  Cwoe_4641  cobalamin B12-binding domain protein  63.2 
 
 
143 aa  155  2e-37  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.123677 
 
 
-
 
NC_009523  RoseRS_2024  cobalamin B12-binding domain-containing protein  60.94 
 
 
134 aa  155  2e-37  Roseiflexus sp. RS-1  Bacteria  normal  decreased coverage  0.000794891 
 
 
-
 
NC_009972  Haur_3987  cobalamin B12-binding domain-containing protein  60.94 
 
 
137 aa  155  2e-37  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0195294  n/a   
 
 
-
 
NC_013522  Taci_0289  cobalamin B12-binding domain protein  58.27 
 
 
140 aa  154  5.0000000000000005e-37  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_2998  cobalamin B12-binding domain-containing protein  60.94 
 
 
134 aa  154  5.0000000000000005e-37  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.651513  normal  0.0337584 
 
 
-
 
NC_013061  Phep_4240  cobalamin B12-binding domain protein  58.46 
 
 
139 aa  154  6e-37  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_1541  methylmalonyl-CoA mutase, alpha subunit  59.2 
 
 
151 aa  153  8e-37  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.0770461  normal 
 
 
-
 
NC_009440  Msed_2055  cobalamin B12-binding domain-containing protein  54.62 
 
 
155 aa  153  1e-36  Metallosphaera sedula DSM 5348  Archaea  normal  normal 
 
 
-
 
NC_011830  Dhaf_2692  cobalamin B12-binding domain protein  56.69 
 
 
140 aa  147  4e-35  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_0241  cobalamin B12-binding domain protein  57.03 
 
 
139 aa  147  4e-35  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_012029  Hlac_0510  cobalamin B12-binding domain protein  55.2 
 
 
139 aa  146  1.0000000000000001e-34  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.736031  normal  0.90311 
 
 
-
 
NC_013202  Hmuk_2805  cobalamin B12-binding domain protein  53.17 
 
 
142 aa  145  2.0000000000000003e-34  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.069341  normal 
 
 
-
 
NC_013744  Htur_4360  cobalamin B12-binding domain protein  53.54 
 
 
138 aa  145  3e-34  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.36975  n/a   
 
 
-
 
NC_013216  Dtox_1910  cobalamin B12-binding domain protein  55.04 
 
 
134 aa  144  5e-34  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.374857  normal  0.0962097 
 
 
-
 
NC_008554  Sfum_0457  cobalamin B12-binding domain-containing protein  54.33 
 
 
133 aa  144  6e-34  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.364165 
 
 
-
 
NC_009050  Rsph17029_3654  cobalamin B12-binding domain-containing protein  53.6 
 
 
135 aa  142  1e-33  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.136466 
 
 
-
 
NC_013947  Snas_6220  cobalamin B12-binding domain-containing protein  57.6 
 
 
134 aa  142  2e-33  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_3591  cobalamin B12-binding domain-containing protein  55.47 
 
 
143 aa  141  3e-33  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1769  cobalamin B12-binding domain-containing protein  53.91 
 
 
134 aa  141  4e-33  Desulfotomaculum reducens MI-1  Bacteria  decreased coverage  0.00734137  n/a   
 
 
-
 
NC_008146  Mmcs_3825  methylmalonyl-CoA mutase C-terminal domain-containing protein  55.28 
 
 
132 aa  140  4e-33  Mycobacterium sp. MCS  Bacteria  normal  0.438631  n/a   
 
 
-
 
NC_008705  Mkms_3899  cobalamin B12-binding domain-containing protein  55.28 
 
 
132 aa  140  4e-33  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_3811  cobalamin B12-binding domain-containing protein  55.28 
 
 
132 aa  140  4e-33  Mycobacterium sp. JLS  Bacteria  normal  0.0469463  normal  0.0948206 
 
 
-
 
NC_009717  Xaut_5018  cobalamin B12-binding domain-containing protein  53.12 
 
 
135 aa  139  9.999999999999999e-33  Xanthobacter autotrophicus Py2  Bacteria  normal  0.622944  normal 
 
 
-
 
NC_013743  Htur_0900  cobalamin B12-binding domain protein  52.76 
 
 
138 aa  139  9.999999999999999e-33  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013922  Nmag_2472  cobalamin B12-binding domain protein  52.38 
 
 
152 aa  139  9.999999999999999e-33  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013235  Namu_1263  cobalamin B12-binding domain protein  58.54 
 
 
149 aa  139  9.999999999999999e-33  Nakamurella multipartita DSM 44233  Bacteria  normal  0.728671  normal  0.8637 
 
 
-
 
NC_013440  Hoch_3774  cobalamin B12-binding domain protein  52.03 
 
 
157 aa  138  1.9999999999999998e-32  Haliangium ochraceum DSM 14365  Bacteria  normal  0.137195  normal  0.13274 
 
 
-
 
NC_010718  Nther_1487  cobalamin B12-binding domain protein  56.56 
 
 
135 aa  139  1.9999999999999998e-32  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.40083  normal  0.12756 
 
 
-
 
NC_008826  Mpe_B0538  methylmalonyl-CoA mutase C-terminal domain-containing protein  50.39 
 
 
136 aa  136  8.999999999999999e-32  Methylibium petroleiphilum PM1  Bacteria  normal  decreased coverage  0.000893241 
 
 
-
 
NC_013744  Htur_3836  cobalamin B12-binding domain protein  49.61 
 
 
138 aa  133  6.0000000000000005e-31  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.692162  n/a   
 
 
-
 
NC_009921  Franean1_4309  cobalamin B12-binding domain-containing protein  54.47 
 
 
133 aa  133  7.000000000000001e-31  Frankia sp. EAN1pec  Bacteria  normal  normal  0.734858 
 
 
-
 
NC_009338  Mflv_2388  cobalamin B12-binding domain-containing protein  54.47 
 
 
133 aa  132  9.999999999999999e-31  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.698998  normal 
 
 
-
 
NC_013124  Afer_0318  cobalamin B12-binding domain protein  51.22 
 
 
162 aa  132  9.999999999999999e-31  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_4260  cobalamin B12-binding domain-containing protein  53.23 
 
 
133 aa  132  1.9999999999999998e-30  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.480541 
 
 
-
 
NC_008699  Noca_2128  cobalamin B12-binding domain-containing protein  48.39 
 
 
172 aa  125  2.0000000000000002e-28  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_010085  Nmar_0958  cobalamin B12-binding domain-containing protein  50.41 
 
 
140 aa  122  2e-27  Nitrosopumilus maritimus SCM1  Archaea  n/a    hitchhiker  0.0044288 
 
 
-
 
NC_009621  Smed_5088  cobalamin B12-binding domain-containing protein  50 
 
 
153 aa  120  5e-27  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_1197  methylmalonyl-CoA mutase, large subunit  47.58 
 
 
657 aa  118  3e-26  Xanthobacter autotrophicus Py2  Bacteria  normal  0.282186  normal 
 
 
-
 
NC_008699  Noca_1772  methylmalonyl-CoA mutase  51.35 
 
 
680 aa  117  4.9999999999999996e-26  Nocardioides sp. JS614  Bacteria  normal  0.292142  n/a   
 
 
-
 
NC_009952  Dshi_2855  methylmalonyl-CoA mutase  45.54 
 
 
657 aa  116  9.999999999999999e-26  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_2169  methylmalonyl-CoA mutase  47.32 
 
 
692 aa  115  1.9999999999999998e-25  Frankia sp. CcI3  Bacteria  normal  0.485789  normal  0.751366 
 
 
-
 
NC_009921  Franean1_1034  methylmalonyl-CoA mutase, large subunit  47.32 
 
 
666 aa  114  6e-25  Frankia sp. EAN1pec  Bacteria  normal  0.488774  normal  0.762762 
 
 
-
 
NC_009719  Plav_1625  methylmalonyl-CoA mutase, large subunit  44.64 
 
 
667 aa  112  2.0000000000000002e-24  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4003  methylmalonyl-CoA mutase, large subunit  47.75 
 
 
685 aa  112  2.0000000000000002e-24  Salinispora arenicola CNS-205  Bacteria  normal  0.446619  hitchhiker  0.000372138 
 
 
-
 
NC_009428  Rsph17025_3008  methylmalonyl-CoA mutase, large subunit  42.34 
 
 
652 aa  111  3e-24  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.842553  normal  0.248307 
 
 
-
 
NC_013739  Cwoe_4193  methylmalonyl-CoA mutase, large subunit  48.21 
 
 
670 aa  111  3e-24  Conexibacter woesei DSM 14684  Bacteria  normal  0.669168  normal  0.90036 
 
 
-
 
NC_007643  Rru_A3062  methylmalonyl-CoA mutase  46.43 
 
 
671 aa  111  3e-24  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_3621  methylmalonyl-CoA mutase, large subunit  47.75 
 
 
668 aa  111  4.0000000000000004e-24  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_2697  methylmalonyl-CoA mutase  45.11 
 
 
720 aa  109  1.0000000000000001e-23  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.20812 
 
 
-
 
NC_007493  RSP_0961  methylmalonyl-CoA mutase  42.34 
 
 
652 aa  108  2.0000000000000002e-23  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_0797  methylmalonyl-CoA mutase  43.24 
 
 
654 aa  109  2.0000000000000002e-23  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008687  Pden_3875  methylmalonyl-CoA mutase, large subunit  42.86 
 
 
688 aa  108  3e-23  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_2621  methylmalonyl-CoA mutase, large subunit  41.44 
 
 
652 aa  107  6e-23  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_1226  methylmalonyl-CoA mutase, large subunit  47.29 
 
 
672 aa  106  9.000000000000001e-23  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.6728  normal  0.0673448 
 
 
-
 
NC_007517  Gmet_2208  methylmalonyl-CoA mutase-like  45.6 
 
 
135 aa  105  1e-22  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00000192903  normal  0.0126749 
 
 
-
 
NC_008043  TM1040_3106  methylmalonyl-CoA mutase  40.16 
 
 
661 aa  105  2e-22  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_0836  methylmalonyl-CoA mutase, large subunit  41.07 
 
 
662 aa  102  1e-21  Caulobacter sp. K31  Bacteria  normal  0.733808  normal  0.66979 
 
 
-
 
NC_010002  Daci_3753  methylmalonyl-CoA mutase  44.19 
 
 
738 aa  102  1e-21  Delftia acidovorans SPH-1  Bacteria  normal  0.801598  normal  0.879758 
 
 
-
 
NC_008639  Cpha266_1164  methylmalonyl-CoA mutase  41.46 
 
 
713 aa  102  2e-21  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.197015  n/a   
 
 
-
 
NC_012791  Vapar_2127  methylmalonyl-CoA mutase  42.97 
 
 
720 aa  101  3e-21  Variovorax paradoxus S110  Bacteria  normal  0.063815  n/a   
 
 
-
 
NC_013124  Afer_0223  methylmalonyl-CoA mutase, large subunit  46.51 
 
 
647 aa  101  4e-21  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.784456  n/a   
 
 
-
 
NC_008752  Aave_2510  methylmalonyl-CoA mutase  42.31 
 
 
722 aa  101  4e-21  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.178476 
 
 
-
 
NC_009379  Pnuc_0910  methylmalonyl-CoA mutase  42.64 
 
 
739 aa  101  4e-21  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.736612  n/a   
 
 
-
 
NC_011992  Dtpsy_1849  methylmalonyl-CoA mutase  43.2 
 
 
720 aa  100  5e-21  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_0334  methylmalonyl-CoA mutase, large subunit  44.04 
 
 
688 aa  100  5e-21  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010531  Pnec_0932  methylmalonyl-CoA mutase  42.64 
 
 
724 aa  100  5e-21  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0290  methylmalonyl-CoA mutase, large subunit  44.04 
 
 
688 aa  100  5e-21  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.515512 
 
 
-
 
NC_008782  Ajs_2040  methylmalonyl-CoA mutase  43.2 
 
 
720 aa  100  5e-21  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1106  methylmalonyl-CoA mutase, large subunit  43.12 
 
 
680 aa  100  5e-21  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_0038  methylmalonyl-CoA mutase, large subunit  44.95 
 
 
690 aa  100  9e-21  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.579469  n/a   
 
 
-
 
NC_011059  Paes_0875  methylmalonyl-CoA mutase, large subunit  43.86 
 
 
1081 aa  100  9e-21  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal  0.036821 
 
 
-
 
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