Gene Mrad2831_1106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_1106 
Symbol 
ID6137123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp1162578 
End bp1164620 
Gene Length2043 bp 
Protein Length680 aa 
Translation table11 
GC content70% 
IMG OID641626815 
Productmethylmalonyl-CoA mutase, large subunit 
Protein accessionYP_001753798 
Protein GI170747538 
COG category[I] Lipid transport and metabolism 
COG ID[COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) 
TIGRFAM ID[TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCGA GCGTCGCCGA GACCAGGAGC GACAAGTCGA GCCGCGACAA GCCCTGGATT 
ATCCGCACCT ACGCGGGGCA CTCGACCGCG GCGGAGTCCA ACAAGCTCTA TCGGGGCAAC
CTCGCCAAGG GCCAGACCGG CCTGTCAGTC GCCTTCGACC TGCCGACCCA GACCGGCTAC
GACCCCGACC ACGAGCTGTC CCGCGGCGAG GTCGGCAAGG TCGGCGTCTC GATCGCGCAT
CTCGGCGACA TGCGGACCCT GTTCCAGGAC ATCCCGCTCG CCCAGATGAA CACCTCGATG
ACGATCAACG CCACGGCCCC GTGGCTGCTG GCGCTCTACC TCGCGGTGGC CGAGGAGCAG
GGCGCGCCGA TCGCCGCGCT CCAGGGCACG ACCCAGAACG ACATCATCAA GGAGTACCTG
TCGCGCGGCA CCTACGTGTT CCCGCCCGCG CCGTCCCTTC GGCTCACCAA GGACGTGATC
CTGTTCACGA CCCGGAACGT GCCGAAGTGG AACCCGATGA ACGTCTGCTC CTACCACCTT
CAGGAGGCGG GGGCGACGCC GGTCCAGGAG CTCTCCTACG CGCTCGCCAT CGCCATCGCG
GTGCTCGACA CCGTGCGCGA GGACCCCGAA TTCGACGCCG CGAGCTTCCC GGAGGTGTTC
GGCCGGATCT CGTTCTTCGT GAACGCGGGC CTGCGGTTCG TCACCGAGAT CTGCAAGATG
CGGGCGTTCT CGGAGCTCTG GGACGAGATC GCCCGGGAGC GCTACGGCAT CGACGACCCG
AAGAAGCGCA TCTTCCGCTA CGGCGTGCAG GTGAACTCTC TGGGGCTCAC CGAGCAGCAG
CCGGAGAACA ACGTCCACCG CATCCTGATC GAGATGCTGG CGGTGACGCT GTCCAAGCGC
GCCCGCGCCC GCGCGGTGCA GCTCCCGGCC TGGAACGAGG CGCTCGGCCT GCCGCGGCCC
TGGGACCAGC AATGGTCCAT GCGCATGCAG CAGATCCTGG CCTTCGAGAC CGACCTGCTG
GAATACGACG ACATCTTCGA CGGCAGCCAC GTGATCGAGG CCAAGGTCGA GGAGCTGAAG
GCGCAGACCC GCGCCGAGCT GGAGCGGATC GGCGGCATCG GCGGCGCGGT CGCGGCGGTG
GAGACCGGCG CGCTCAAGCG CGCGCTGGTG GAGTCGAACG CCCGCCGGAT CTCGGCCATC
GAGGCCGGCG AGCAGATCGT CGTCGGCGTC AACAAGTGGC AGCAGGGCGA GCCGTCGCCG
CTCACGGCCG GGGAGGGGGC GATCTTCTCC GTCTCCGAGA CCGTCGAGAT GGAGGCGCAG
AGCCGGATCC GCGAGTGGCG CGGCCGCCGC GACGAGAACG CCGTCGGCCA AGCCCTCGAC
GCCCTGGAGC GGGCGGCGCG CTCCGGCACC AACATCATGC CGCCCTCGAT CGAGGCCGCC
AAGGCCGGCG TCACGACGGG CGAGTGGGGC GCGCGCCTGC GCGCGGTGTT CGGCGAGTAC
CGGGCCCCCA CCGGCGTGAC CGTCGAGACG GTCTCCAGCG GCGCGGCCGA GGAGGCCAAG
CTCCTGATCG CCGATCTCGG CGAGCGGCTC GGCGAGACGC CGAAGCTCGT GGTCGGCAAG
CCCGGCCTCG ACGGCCATTC CAACGGCGCC GAGCAGATCG CGCTCCGCGC CCGGGACGTC
GGCTTCGACG TCACCTACGA CGGCATCCGC CAGACGCCGG CCGAGATCGT CGCGAAGGCC
AAGGAGACCG GCGCCCACGT GGTCGGCCTG TCGATCCTGT CCGGATCCCA CGTGCCGCTG
GTGCGGGAGG TCCGCGCCAA GATGCGGGAG GCGGGGCTCG ACCACATCCC GGTGGTGGTC
GGCGGCATCA TCTCGCCGGA GGACGAGCTG GTCCTCAAGA ACATGGGCGT GCGCGCCGTC
TACACGCCGA AGGACTACGC CATCGACCAG ATCATGGTCG GGCTCGCCAA GGTGGTGGAG
AAGGGCCTGG AGCGCCGGGA CGGCCCGTCG AACCAGCCGC GCGCGGAGGC TCAGGTCTAC
TAG
 
Protein sequence
MGASVAETRS DKSSRDKPWI IRTYAGHSTA AESNKLYRGN LAKGQTGLSV AFDLPTQTGY 
DPDHELSRGE VGKVGVSIAH LGDMRTLFQD IPLAQMNTSM TINATAPWLL ALYLAVAEEQ
GAPIAALQGT TQNDIIKEYL SRGTYVFPPA PSLRLTKDVI LFTTRNVPKW NPMNVCSYHL
QEAGATPVQE LSYALAIAIA VLDTVREDPE FDAASFPEVF GRISFFVNAG LRFVTEICKM
RAFSELWDEI ARERYGIDDP KKRIFRYGVQ VNSLGLTEQQ PENNVHRILI EMLAVTLSKR
ARARAVQLPA WNEALGLPRP WDQQWSMRMQ QILAFETDLL EYDDIFDGSH VIEAKVEELK
AQTRAELERI GGIGGAVAAV ETGALKRALV ESNARRISAI EAGEQIVVGV NKWQQGEPSP
LTAGEGAIFS VSETVEMEAQ SRIREWRGRR DENAVGQALD ALERAARSGT NIMPPSIEAA
KAGVTTGEWG ARLRAVFGEY RAPTGVTVET VSSGAAEEAK LLIADLGERL GETPKLVVGK
PGLDGHSNGA EQIALRARDV GFDVTYDGIR QTPAEIVAKA KETGAHVVGL SILSGSHVPL
VREVRAKMRE AGLDHIPVVV GGIISPEDEL VLKNMGVRAV YTPKDYAIDQ IMVGLAKVVE
KGLERRDGPS NQPRAEAQVY