Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_1106 |
Symbol | |
ID | 6137123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010505 |
Strand | + |
Start bp | 1162578 |
End bp | 1164620 |
Gene Length | 2043 bp |
Protein Length | 680 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641626815 |
Product | methylmalonyl-CoA mutase, large subunit |
Protein accession | YP_001753798 |
Protein GI | 170747538 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit [COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCGCGA GCGTCGCCGA GACCAGGAGC GACAAGTCGA GCCGCGACAA GCCCTGGATT ATCCGCACCT ACGCGGGGCA CTCGACCGCG GCGGAGTCCA ACAAGCTCTA TCGGGGCAAC CTCGCCAAGG GCCAGACCGG CCTGTCAGTC GCCTTCGACC TGCCGACCCA GACCGGCTAC GACCCCGACC ACGAGCTGTC CCGCGGCGAG GTCGGCAAGG TCGGCGTCTC GATCGCGCAT CTCGGCGACA TGCGGACCCT GTTCCAGGAC ATCCCGCTCG CCCAGATGAA CACCTCGATG ACGATCAACG CCACGGCCCC GTGGCTGCTG GCGCTCTACC TCGCGGTGGC CGAGGAGCAG GGCGCGCCGA TCGCCGCGCT CCAGGGCACG ACCCAGAACG ACATCATCAA GGAGTACCTG TCGCGCGGCA CCTACGTGTT CCCGCCCGCG CCGTCCCTTC GGCTCACCAA GGACGTGATC CTGTTCACGA CCCGGAACGT GCCGAAGTGG AACCCGATGA ACGTCTGCTC CTACCACCTT CAGGAGGCGG GGGCGACGCC GGTCCAGGAG CTCTCCTACG CGCTCGCCAT CGCCATCGCG GTGCTCGACA CCGTGCGCGA GGACCCCGAA TTCGACGCCG CGAGCTTCCC GGAGGTGTTC GGCCGGATCT CGTTCTTCGT GAACGCGGGC CTGCGGTTCG TCACCGAGAT CTGCAAGATG CGGGCGTTCT CGGAGCTCTG GGACGAGATC GCCCGGGAGC GCTACGGCAT CGACGACCCG AAGAAGCGCA TCTTCCGCTA CGGCGTGCAG GTGAACTCTC TGGGGCTCAC CGAGCAGCAG CCGGAGAACA ACGTCCACCG CATCCTGATC GAGATGCTGG CGGTGACGCT GTCCAAGCGC GCCCGCGCCC GCGCGGTGCA GCTCCCGGCC TGGAACGAGG CGCTCGGCCT GCCGCGGCCC TGGGACCAGC AATGGTCCAT GCGCATGCAG CAGATCCTGG CCTTCGAGAC CGACCTGCTG GAATACGACG ACATCTTCGA CGGCAGCCAC GTGATCGAGG CCAAGGTCGA GGAGCTGAAG GCGCAGACCC GCGCCGAGCT GGAGCGGATC GGCGGCATCG GCGGCGCGGT CGCGGCGGTG GAGACCGGCG CGCTCAAGCG CGCGCTGGTG GAGTCGAACG CCCGCCGGAT CTCGGCCATC GAGGCCGGCG AGCAGATCGT CGTCGGCGTC AACAAGTGGC AGCAGGGCGA GCCGTCGCCG CTCACGGCCG GGGAGGGGGC GATCTTCTCC GTCTCCGAGA CCGTCGAGAT GGAGGCGCAG AGCCGGATCC GCGAGTGGCG CGGCCGCCGC GACGAGAACG CCGTCGGCCA AGCCCTCGAC GCCCTGGAGC GGGCGGCGCG CTCCGGCACC AACATCATGC CGCCCTCGAT CGAGGCCGCC AAGGCCGGCG TCACGACGGG CGAGTGGGGC GCGCGCCTGC GCGCGGTGTT CGGCGAGTAC CGGGCCCCCA CCGGCGTGAC CGTCGAGACG GTCTCCAGCG GCGCGGCCGA GGAGGCCAAG CTCCTGATCG CCGATCTCGG CGAGCGGCTC GGCGAGACGC CGAAGCTCGT GGTCGGCAAG CCCGGCCTCG ACGGCCATTC CAACGGCGCC GAGCAGATCG CGCTCCGCGC CCGGGACGTC GGCTTCGACG TCACCTACGA CGGCATCCGC CAGACGCCGG CCGAGATCGT CGCGAAGGCC AAGGAGACCG GCGCCCACGT GGTCGGCCTG TCGATCCTGT CCGGATCCCA CGTGCCGCTG GTGCGGGAGG TCCGCGCCAA GATGCGGGAG GCGGGGCTCG ACCACATCCC GGTGGTGGTC GGCGGCATCA TCTCGCCGGA GGACGAGCTG GTCCTCAAGA ACATGGGCGT GCGCGCCGTC TACACGCCGA AGGACTACGC CATCGACCAG ATCATGGTCG GGCTCGCCAA GGTGGTGGAG AAGGGCCTGG AGCGCCGGGA CGGCCCGTCG AACCAGCCGC GCGCGGAGGC TCAGGTCTAC TAG
|
Protein sequence | MGASVAETRS DKSSRDKPWI IRTYAGHSTA AESNKLYRGN LAKGQTGLSV AFDLPTQTGY DPDHELSRGE VGKVGVSIAH LGDMRTLFQD IPLAQMNTSM TINATAPWLL ALYLAVAEEQ GAPIAALQGT TQNDIIKEYL SRGTYVFPPA PSLRLTKDVI LFTTRNVPKW NPMNVCSYHL QEAGATPVQE LSYALAIAIA VLDTVREDPE FDAASFPEVF GRISFFVNAG LRFVTEICKM RAFSELWDEI ARERYGIDDP KKRIFRYGVQ VNSLGLTEQQ PENNVHRILI EMLAVTLSKR ARARAVQLPA WNEALGLPRP WDQQWSMRMQ QILAFETDLL EYDDIFDGSH VIEAKVEELK AQTRAELERI GGIGGAVAAV ETGALKRALV ESNARRISAI EAGEQIVVGV NKWQQGEPSP LTAGEGAIFS VSETVEMEAQ SRIREWRGRR DENAVGQALD ALERAARSGT NIMPPSIEAA KAGVTTGEWG ARLRAVFGEY RAPTGVTVET VSSGAAEEAK LLIADLGERL GETPKLVVGK PGLDGHSNGA EQIALRARDV GFDVTYDGIR QTPAEIVAKA KETGAHVVGL SILSGSHVPL VREVRAKMRE AGLDHIPVVV GGIISPEDEL VLKNMGVRAV YTPKDYAIDQ IMVGLAKVVE KGLERRDGPS NQPRAEAQVY
|
| |