| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1034 |
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| Symbol | |
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| ID | 5669448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1213234 |
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| End bp | 1215234 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641239963 |
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| Product | methylmalonyl-CoA mutase, large subunit |
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| Protein accession | YP_001505396 |
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| Protein GI | 158312888 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.488774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.762762 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGATG TGGCCAGGTC GGAGCGTGAC CGGCCGTGGA TCGTGCGGAC CTACGCGGGT
CATTCGAGTC CGGCGGAGAG TAACGCTCTG TACCGGCGGA ATCTGGCGAA GGGGCAGACG
GGTCTGTCGG TGGCTTTCGA TCTGCCGACG CAGACCGGGT ACGACCCGGA TCATGTGCTG
GCGCGTGGTG AGGTCGGGAA GGTGGGTGTG CCGGTCGCGC ATCTGGGTGA CATGCGGGCG
TTGTTCGAGC AGATCCCGTT GGGTCGGATG AACACGTCGA TGACCATCAA CGCGACGGCG
ATGTGGTTGC TGGCGTTGTA CCAGGTGGTG GCGGAGGAGC AGGGTGTCGC GGCCGAGGAG
CTGACCGGCA CGACCCAGAA CGACATCATC AAGGAGTACC TGTCGCGGGG GACGTATGTG
TTCCCGCCGG GGCCGTCGCT GCGGCTGATC ACGGACATCG TCGCGTACAC GGTGACGGAG
ATCCCGCGCT GGAACCCGAT CAACATCTGT AGTTATCACC TGCAGGAGGC GGGTGCGACG
CCGGTGCAGG AGTTGGCGTA CTCGTTGTGC ACGGTGATCG CGGTGCTCGA CGCGGTGGTC
GCTTCCGGTC AGGTGCCGGT GGAGCGGATG GGCGAGGTGT GTGCCCGGAT GTCGTTCTTC
GTGAACGCCG GGGTGCGTTT CGTGGAGGAG ATGTGCAAGA TGCGGGCGTT CGTCGCCCTG
TGGGATGATC TGCTGCGGAC TCGTTACGGG GTGACGGATC CGCGTCACCG CCGGTTCCGT
TACGGGGTGC AGGTCAACTC GTTGGGGTTG ACCGAGGCGC AGCCGGAGAA CAACGTGATC
CGGATCGTGT TGGAGGCGCT CGGGGTCACG TTGTCGAAGG ACGCGCGGTG TCGGGCGTTG
CAGTTGCCTG CGTGGAACGA GGCCCTGGGT TTGCCGCGTC CGTGGGATCA GCAGTGGTCG
CTGCGTATCC AGCAGATCCT GGCCTATGAG ACGGATCTGT TGGAGTACCC GGATCTGTTC
GAGGGCTCGG TGGTGGTGGC CCGGCGGGTC GAGGAGCTGG TTGCGGCCGC GACCGAGGAG
ATCGACCGGG TGCAGGCGAT GGGTGGGGCT GTCGCCGCTG TGGAGAGCGG GTATATGAAG
TCCCAGTTGG TGGCTTCGCA GGCGATGCGG CGGGCGCGGA TCGAGTCTGG TGAGGATGTT
GTTGTCGGGG TGAACCGGTT CACTGAGACC GAGCCGAATC CGCTGCTGGC CGATCTGGAT
GCGGCGGTGC AGACGGTGGA TCCGGCGGGT GAGGAGGCGG CCCGGGTTCA GGTCGCTGCG
TGGCGGGCCG CCCGTGATGC CTCCGTTGTC GACGAGGCGC TGCTCGGGTT GCGTGAGGCG
GCGAAGACGG ATGCGAACCT GGTGCCGGCG ACGTTGGCGT GTGCTCGTGC CGGGGTGACG
ACGGGGGAGT GGGCGGGTGT GTTGCGTGAG GTGTTCGGTG AGTACCGGGC GCCGACCGGG
GTGTCTGCCG CGCCGTCGGC CGCTGCTGCG GGTGCTGGGC TGGGGGAGGT GCGTGACCTG
GTGACCGTGA CCGCTGGTGA GTTGGGTCGC CGGCCGCGGC TGCTGGTGGG TAAGCCCGGG
TTGGACGGGC ATTCCAACGG TGCCGAGCAG ATCGCGGTCC GGGCTCGTGA TGTGGGCTTT
GAGGTGGTCT ATCAGGGGAT CCGTCTCACC CCGGCGCAGA TCGTCGCTGC GGCTGTGGAG
GAGGACGTTC ATGTGGTGGG GCTGTCGGTG CTCTCCGGTT CGCATATGAA CCTGGTGCCC
GAGGTGCTGG ACGGGCTGCG TGCGGCTGGT CTCGGGGATG TTCCGGTCGT GGTCGGGGGG
ATCATTCCGC CCGCGGACGC GGAACGCCTG GCGACGCTCG GTGTTGCGGC GGTCTTCACA
CCGAAGGACT ACGGGCTGAC CGACATCATG CGTGGCATCG TGAACATCGT GCGCACCTCA
AACGGCCTGG CGAGTGCCTG A
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| Protein sequence | MTDVARSERD RPWIVRTYAG HSSPAESNAL YRRNLAKGQT GLSVAFDLPT QTGYDPDHVL
ARGEVGKVGV PVAHLGDMRA LFEQIPLGRM NTSMTINATA MWLLALYQVV AEEQGVAAEE
LTGTTQNDII KEYLSRGTYV FPPGPSLRLI TDIVAYTVTE IPRWNPINIC SYHLQEAGAT
PVQELAYSLC TVIAVLDAVV ASGQVPVERM GEVCARMSFF VNAGVRFVEE MCKMRAFVAL
WDDLLRTRYG VTDPRHRRFR YGVQVNSLGL TEAQPENNVI RIVLEALGVT LSKDARCRAL
QLPAWNEALG LPRPWDQQWS LRIQQILAYE TDLLEYPDLF EGSVVVARRV EELVAAATEE
IDRVQAMGGA VAAVESGYMK SQLVASQAMR RARIESGEDV VVGVNRFTET EPNPLLADLD
AAVQTVDPAG EEAARVQVAA WRAARDASVV DEALLGLREA AKTDANLVPA TLACARAGVT
TGEWAGVLRE VFGEYRAPTG VSAAPSAAAA GAGLGEVRDL VTVTAGELGR RPRLLVGKPG
LDGHSNGAEQ IAVRARDVGF EVVYQGIRLT PAQIVAAAVE EDVHVVGLSV LSGSHMNLVP
EVLDGLRAAG LGDVPVVVGG IIPPADAERL ATLGVAAVFT PKDYGLTDIM RGIVNIVRTS
NGLASA
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