| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1487 |
|---|
| Symbol | |
|---|
| ID | 6315499 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 1559748 |
|---|
| End bp | 1560155 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 642643867 |
|---|
| Product | cobalamin B12-binding domain protein |
|---|
| Protein accession | YP_001917658 |
|---|
| Protein GI | 188586113 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
|---|
| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.40083 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 0.12756 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCTCCCA AAAGAGTGGT TGTGGCAAAA CCAGGTTTAG ATGGACATGA TAGAGGTGCG
AAATTTATCG CAAGAGCCTT AAGAGATGCA GGAATGGAAG TAATTTATAC TGGGCTTAGA
CAAACTCCAG AACAAATAGC ATCTATTACA TTACAGGAAG ATGCTCAAGT TTTGGCATTA
AGCTGCTTAT CCGGTGCTCA TAATGAGTTA TTTCCCCAGA TTGTATCTAT GTTGAAGGAT
GAAGGTGCAG AAGATGTCTT GGTCTTAGGA GGGGGGATTA TTCCTGAAGA AGATATCCCT
TATCTGAAAG AACAAGGAGT AGCAGAAGTA TTTACTCCAG GTACTACTAG TCAGGAAATT
ATTGACTTTA TAGAGAAAAA TGTGGATAAT AAGGAGGTAT CTTCATGA
|
|---|
| Protein sequence | MSPKRVVVAK PGLDGHDRGA KFIARALRDA GMEVIYTGLR QTPEQIASIT LQEDAQVLAL
SCLSGAHNEL FPQIVSMLKD EGAEDVLVLG GGIIPEEDIP YLKEQGVAEV FTPGTTSQEI
IDFIEKNVDN KEVSS
|
|---|
| |