Gene Haur_3987 details

Gene Information

• Locus tag: Haur_3987
• ID: 5735848
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Herpetosiphon aurantiacus ATCC 23779
• Kingdom: Bacteria
• Replicon accession: NC_009972
• Strand: +
• Start bp: 5086566
• End bp: 5086979
• Gene Length: 414 bp
• Protein Length: 137 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 641281137
• Product: cobalamin B12-binding domain-containing protein
• Protein accession: YP_001546747
• Protein GI: 159900500
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding)
• TIGRFAM ID: [TIGR00640] methylmalonyl-CoA mutase C-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0195294
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACGAC CAATTCGGGT GTTAGTGGCC AAACCAGGGC TTGATGGCCA CGACCGTGGC 
GCAAAAGTGA TCGCCCGTGC CTTGCGTGAT GCAGGCATGG AAGTTATTTA TACTGGGTTG 
CAACAAACCC CCCAAATGAT CGTTGAAGCC GCCTTGCAAG AAGACGTTGA TTGCATCGGC 
TTGTCGATTC TCTCAGGGGC GCATATGACC TTGCTGCCCA AAATCACCAC CATGCTGCGC 
GAAAACGATG GCGCGGATAT TTTGGTTGTA GCTGGCGGCA TTATCTCCGA TGAAGATGCA 
GCAATCTTGC GCAACGATCA TGGGATTGCG GGGATTTTCG GGCCTGGCTC TTCGACCCAT 
GCAATTATCG ATTTTATTCG TGAGCATGTT GAGCGTAGCT CGGTAGAAGG GTAG 

 

Protein sequence

MERPIRVLVA KPGLDGHDRG AKVIARALRD AGMEVIYTGL QQTPQMIVEA ALQEDVDCIG 
LSILSGAHMT LLPKITTMLR ENDGADILVV AGGIISDEDA AILRNDHGIA GIFGPGSSTH 
AIIDFIREHV ERSSVEG