| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3654 |
|---|
| Symbol | |
|---|
| ID | 4898305 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | + |
|---|
| Start bp | 755412 |
|---|
| End bp | 755819 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640114262 |
|---|
| Product | cobalamin B12-binding domain-containing protein |
|---|
| Protein accession | YP_001045516 |
|---|
| Protein GI | 126464403 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
|---|
| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.136466 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACCC AGATCCGTGT GCTGCTCGCG AAGGTTGGCC TCGATGGCCA CGACCGCGGT
GTGAAGGTGG TGGCCCGCAC CCTGCGCGAT GCCGGGATGG ATGTCGTCTA TTCCGGTCTC
CACCGCACCC CGGAGGAGGT GGTGACGGCC GCGGTGCAGG AGGATGTGGA CATCCTCGGC
GTCAGCCTCC TGTCGGGCGT GCAGATGACG GTCTTTCCGA AGATCTTCGC GCTGCTGAAG
GAGCACAAGG TCGAGGACAT GATCGTGGTC GCGGGGGGCG TCATGCCCGA CGAGGATGTG
ATCGAGCTGA AGAAGATGGG CGTGGCCGAG GTGCTGCTGC AGGACACGCC GCCCCAGCAC
ATCATCGACA CCCTCACGGG TCTGGTGAAG GCGCGGGGAG ACCGCTGA
|
|---|
| Protein sequence | MSTQIRVLLA KVGLDGHDRG VKVVARTLRD AGMDVVYSGL HRTPEEVVTA AVQEDVDILG
VSLLSGVQMT VFPKIFALLK EHKVEDMIVV AGGVMPDEDV IELKKMGVAE VLLQDTPPQH
IIDTLTGLVK ARGDR
|
|---|
| |