| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2024 |
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| Symbol | |
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| ID | 5208986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2511542 |
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| End bp | 2511946 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640595630 |
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| Product | cobalamin B12-binding domain-containing protein |
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| Protein accession | YP_001276359 |
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| Protein GI | 148656154 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000794891 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGATCGCC CAATCCGCGT GCTGATCGCA AAACCAGGTC TCGATGGTCA CGACCGTGGG
GCGAAGGTGA TCGCCCGTGC TTTGCGCGAT GCCGGTATGG AGGTAATCTA CACCGGCATT
CAACAAACGC CGCAGATGAT CGTCGAAGCG GCGCTTCAGG AAGATGTCGA TGTGATCGGT
CTCTCGATCC TCTCCGGTGC GCATATGACG CTCCTGCCAC GGGTGATGGA GTTGCTGCGC
GAACACGATA TGCACGACGT GCTGGTGGTG GCTGGCGGCA TTATCTCCGA CGAGGATGCG
CAGGTGCTGA AAGATCAGCA CGGTATCGCC GAGGTGTACG GACCCGGCGC CTCGACGCAC
GAGATCGTGC GCTTCATTCA GGAACGGTGC AGAACGAGGA CCTGA
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| Protein sequence | MDRPIRVLIA KPGLDGHDRG AKVIARALRD AGMEVIYTGI QQTPQMIVEA ALQEDVDVIG
LSILSGAHMT LLPRVMELLR EHDMHDVLVV AGGIISDEDA QVLKDQHGIA EVYGPGASTH
EIVRFIQERC RTRT
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