| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1226 |
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| Symbol | |
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| ID | 8332561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1383618 |
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| End bp | 1385636 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644954373 |
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| Product | methylmalonyl-CoA mutase, large subunit |
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| Protein accession | YP_003111992 |
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| Protein GI | 256390428 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.6728 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0673448 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGAGC GCGATAGATT TTCCGGGAGT GACAGATCTT CCGAGCGTGA CCGCCCCTGG
GTGATGCGGA CCTACGCCGG CCACTCCACC CCGGCGGAGT CCAACGCCCT GTATCGCAGG
AACCTGGCCA AGGGCCAGAC CGGCCTGTCG GTGGCCTTCG ACCTGCCCAC GCAGACCGGC
TACGACCCCG ACTCCATCCT GGCGCGCGGC GAGGTCGGCA AGGTCGGCGT CCCGGTCTCG
CACCTGGGCG ACATGCGGGC GCTGTTCGAC GGCATCCCGC TGGAGCGGAT GAACACCTCG
ATGACCATCA ACGCCCCGGC CATGTGGCTG CTGGCGCTGT ACCAGGTCGC CGCCGAGGAG
CAGGGTGCTG ATATCGCCGC GCTGTCGGGC ACCACGCAGA ACGACATCGT CAAGGAGTAC
CTCTCGCGCG GGACCTACGT CTTCCCGCCC GGACCGTCGC TGCGGCTGAT CACCGACACC
ATCGCCTACA CCGTGGCGAA CATGCCCAAG TGGAACCCGA TCAACATCTG CTCCTACCAC
CTGCAGGAGG CCGGCGCGCA GCCGGTGCAG GAGGTCGCTT ACGCGCTGTC CACGGCGATC
GCCGTGCTGG ACGGCGTGCG CGATTCCGGA CAGGTCGCGC CGGAGGACTT CGGCCAGGTG
GTCGGGCGCA TCTCCTTCTT CGTCAACGCC GGCGTGCGCT TCGTCGAGGA GATGTGCAAG
CTCCGAGCCT TCGCAGAGCT CTGGGATCGC ATCACGCGCG AGCGCTACGG CGTCACCGAC
GACAAGCTGC GCCGCTTCCG CTACGGCGTC CAGGTCAACT CCCTCGGGCT GACCGAGGCG
CAGCCGGAGA ACAACGTCCA GCGCATCCTG CTGGAGATGC TGGCGGTGAC GCTGTCCAAG
GACGCGCGGG CGCGCGCCGT GCAGCTGCCG GCCTGGAACG AGGCGCTCGG CCTGCCGCGG
CCGTGGGACC AGCAGTGGTC GCTGCGCATG CAGCAGGTGC TGGCCTACGA ATCGGACCTG
CTGGAGTACC CCGACCTGTT CGCCGGCTCG AAGGTGGTCG AGGCCAAGAC CGAGGAGATC
GCCGAGGCGG CGTGGGCCGA GATCGGGCGC ATCCAGGACC TCGGCGGCGT CGTGGCGGCC
GTGGAATCGG GCTATCTGAA GGCGCAGCTG GTCGGCGCGC ACGCCGAGCG GCGCGCGAAG
ATCGAGTCCG GCGAGATCAC GGTCGTGGGC GTCAACAAGT TCACCGAGAC CGAGCCGAAC
CCGCTGACCG CCGACCTGGA CGCGGCGATC CAGACCGTGG ATCCGGCGGT GGAGCAGCAC
GCGGTGGCGG CGCTGAAGGA GTGGAAGGAC CAGCGGGACG GCGCGGAGGT CGAGGCCGCA
CTGGACCGGC TGCGTCAGGA GGCTGCGACC GACGCCAACC TGATGGACGC CACGCTCGCC
TGCGTGCGCG CCGGCGTCAC CACGGGGGAG TGGACCGGCG TCCTGCGCGA GGTCTTCGGC
GAATTCCGGG CGCCCACCGG CGTTTCCGGC TCTGTCGGGA CCGCCATCCC CTCGGAGGAG
CTGGTGGTCC TGCGCCGCGA GGTGGATCAG GCCTCTGCGG AACTCGGCCG CCGGCTGCGG
CTGCTGGTCG GCAAGCCCGG CCTGGACGGC CACTCCAACG GCGCCGAGCA GATCGCCGTG
CGGGCCCGCG ACGCCGGCTT CGAGGTGGTC TATCAGGGCA TCCGGCTGAC ACCGGCGCAG
ATCGCGGCGG CCGCGGTGGC CGAGGACGTG CACTGCGTCG GGCTGTCAGT GCTGTCCGGT
TCGCACCTGC AGCTGGTGCC CGAGGTGCTG GCCGAGCTGC GGGCGGCCGG AGCCGGCTCG
GTACCGGTGG TCGTCGGCGG CATCATCCCC GACGCGGACG CGCGCACATT GCGCCAGGCC
GGCGTCGCCG CGGTGTTCAC GCCGAAGGAT TTCGGGATCA CGCAGATCCT GCACACCATC
GTCGAACAGA TCCGGCGTGC CGGATCCGTC GCCGTCTGA
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| Protein sequence | MTERDRFSGS DRSSERDRPW VMRTYAGHST PAESNALYRR NLAKGQTGLS VAFDLPTQTG
YDPDSILARG EVGKVGVPVS HLGDMRALFD GIPLERMNTS MTINAPAMWL LALYQVAAEE
QGADIAALSG TTQNDIVKEY LSRGTYVFPP GPSLRLITDT IAYTVANMPK WNPINICSYH
LQEAGAQPVQ EVAYALSTAI AVLDGVRDSG QVAPEDFGQV VGRISFFVNA GVRFVEEMCK
LRAFAELWDR ITRERYGVTD DKLRRFRYGV QVNSLGLTEA QPENNVQRIL LEMLAVTLSK
DARARAVQLP AWNEALGLPR PWDQQWSLRM QQVLAYESDL LEYPDLFAGS KVVEAKTEEI
AEAAWAEIGR IQDLGGVVAA VESGYLKAQL VGAHAERRAK IESGEITVVG VNKFTETEPN
PLTADLDAAI QTVDPAVEQH AVAALKEWKD QRDGAEVEAA LDRLRQEAAT DANLMDATLA
CVRAGVTTGE WTGVLREVFG EFRAPTGVSG SVGTAIPSEE LVVLRREVDQ ASAELGRRLR
LLVGKPGLDG HSNGAEQIAV RARDAGFEVV YQGIRLTPAQ IAAAAVAEDV HCVGLSVLSG
SHLQLVPEVL AELRAAGAGS VPVVVGGIIP DADARTLRQA GVAAVFTPKD FGITQILHTI
VEQIRRAGSV AV
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