| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2169 |
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| Symbol | |
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| ID | 3906769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2540001 |
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| End bp | 2542079 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637879502 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_481268 |
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| Protein GI | 86740868 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.485789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.751366 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGGCG CGGGCCGGGC GGAGCCGAAG CGGGACCGTC CGTGGATCAT CCGCACCTAT
GCCGGGCATT CGAGCCCGGC CGAGAGTAAC GCGCTGTATC GGCGCAATCT GGCCAAGGGG
CAGACCGGGT TGTCGGTGGC GTTCGATCTG CCCACGCAGA CGGGCTATGA CCCCGATCAC
GCCCTTGCCC GTGGCGAGGT GGGCAGGGTA GGGGTGCCGA TCGCGCATCT CGGTGACATG
CGGCGGTTGT TCGACGGGAT TCCGCTGGCG CGGATGAACA CGTCGATGAC GATCAACGCC
ACCGCGATGT GGCTGCTGGC GTTGTACCAG GTGGTCGCGG AGGAGCAGGG GGCCGATCCG
GCGGAGCTGG CCGGGACGAC CCAGAACGAC ATCATCAAGG AGTATCTGTC GCGGGGGACC
TATGTCTTCC CGCCGGGTCC GTCGCTGCGC CTGATCACCG ACCTGATCGC CTACACGGTG
GCCGAGTTGC CCCGCTGGAA CCCGATCAAC ATCTGCAGTT ATCACCTGCA GGAGGCCGGG
GCCACGCCGG TTCAGGAACT GGCCTATTCC ATGTGCACGG CGATCGCGGT GCTCGATGCC
GTGGCCGCCG CGCGGGGGAT CCCGGTGGGC CGGGCTGACG CGGTCCGGGC TGGCGCGGTC
CGGGCTGGCG CGGACCGCGG GGAGCTGGAG CGGGCGGATT CGGAGTGGAT GGGTGAGGTG
TGTGGTCGGA TCTCCTTCTT CGTCAACGCC GGAGAGCGTT TCGTGGAGGA GATGTGCAAG
ATGCGGGCGT TCACGGCGTT GTGGGATGAG CTGCTGACCT CCCGGTACGG GGTTCGGGAG
CCGGCGCAGC GCCGGTTCCG GTACGGGGTG CAGGTCAACT CGCTGGGGCT GACCGAGGCC
CAGCCGGAGA ACAACATCAT CCGAATTGTG CTGGAGGCGC TGGGGGTAAC CCTGTCGAAG
GACGCGCGGT GTCGGGCGTT GCAGCTGCCG GCCTGGAACG AGGCGCTGGG CCTGCCCCGG
CCGTGGGACC AGCAGTGGTC GCTGCGCATT CAGCAGATCC TCGCTCATGA GACCGATCTG
CTGGAGTATG ACGATCTGTT CGCCGGTTCG GTCGTGGTGG AGAAGCGGGT CGATCAGCTC
GTGGCCGCGG CCAGGGCGGA GATCGACCGG GTTCAGGAGA TGGGGGGCGC CGTCGCCGCG
GTCGAGAGCG GCTATATGAA GTCGCAGCTG GTGACGTCCC AGGCGGCGCG GCGGGCTCGC
ATCGAGAGCG GTGAGGATGT TGTCGTCGGG GTGAACCGGT TCACCGAGAC CGAGCCGAAT
CCGCTGCTCG CCGATCTTTC CGCCGCGATC CAGACGGTCG ATCCGGCGCT GGAGGAGGCG
ACCCGCGCGG AGCTGGCGGC CTGGCGGGCC GCCCGCGACG ACCGGGCGGT GACGGAGGCG
CTGCTCGGCC TGCGGACGGC GGCCGGGACG GACGCGAACC TGGTTCCCGC CACGCTGGCC
TGCGCCCGGG CCGGGGTCAC GACGGGGGAG TGGGGGGACA CGCTGCGGGA GGTGTTCGGG
GAGTACCGGG CACCGACGGG GGTCGGCGAG GCCACCGTCG CCGGTGGTGG CGGGGCCGCC
CTCGACGAGC TGCGGGCCCG GGTGGCGCGC ACGGGGTCCG AGCTGGGCCG TCCGGTGAAG
ATGCTGGTCG GTAAGCCCGG TCTCGACGGG CATTCCAACG GCGCCGAGCA GATCGCGCTG
CGGGCCCGTG ACGCCGGTTT CGAGGTCGTC TACCAGGGGA TCCGGCTGAC GCCGGCGCAG
ATCGTGGCCG GGGCCGTCGA GGAGGACGTG CACGTCGTCG GGCTGTCGGT GCTCTCCGGT
TCCCATCTCG ACCTGGTGCC CCAGGTGCTG ACGGGGCTGG GGGCGGCCGG GGCGGGTGAG
ATCCCCGTCA TCGTGGGCGG CATCATCCCC GCGGCGGACG CGGACGAGCT CGCCCGACTC
GGGGTGGCCG CGGTGTTCAC GCCCAAGGAC TACGAGCTCA CCGCCATCAT CCGGGGCATC
CTCGACGTCG TACGGGCCGC CAACAAGCTC GATCAGTGA
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| Protein sequence | MAGAGRAEPK RDRPWIIRTY AGHSSPAESN ALYRRNLAKG QTGLSVAFDL PTQTGYDPDH
ALARGEVGRV GVPIAHLGDM RRLFDGIPLA RMNTSMTINA TAMWLLALYQ VVAEEQGADP
AELAGTTQND IIKEYLSRGT YVFPPGPSLR LITDLIAYTV AELPRWNPIN ICSYHLQEAG
ATPVQELAYS MCTAIAVLDA VAAARGIPVG RADAVRAGAV RAGADRGELE RADSEWMGEV
CGRISFFVNA GERFVEEMCK MRAFTALWDE LLTSRYGVRE PAQRRFRYGV QVNSLGLTEA
QPENNIIRIV LEALGVTLSK DARCRALQLP AWNEALGLPR PWDQQWSLRI QQILAHETDL
LEYDDLFAGS VVVEKRVDQL VAAARAEIDR VQEMGGAVAA VESGYMKSQL VTSQAARRAR
IESGEDVVVG VNRFTETEPN PLLADLSAAI QTVDPALEEA TRAELAAWRA ARDDRAVTEA
LLGLRTAAGT DANLVPATLA CARAGVTTGE WGDTLREVFG EYRAPTGVGE ATVAGGGGAA
LDELRARVAR TGSELGRPVK MLVGKPGLDG HSNGAEQIAL RARDAGFEVV YQGIRLTPAQ
IVAGAVEEDV HVVGLSVLSG SHLDLVPQVL TGLGAAGAGE IPVIVGGIIP AADADELARL
GVAAVFTPKD YELTAIIRGI LDVVRAANKL DQ
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