Gene Tmel_0582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0582 
Symbol 
ID5296557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand- 
Start bp614463 
End bp614864 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content37% 
IMG OID640768844 
Productcobalamin B12-binding domain-containing protein 
Protein accessionYP_001305834 
Protein GI150020480 
COG category[I] Lipid transport and metabolism 
COG ID[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) 
TIGRFAM ID[TIGR00640] methylmalonyl-CoA mutase C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGA AAATAAGAGT ACTTATTGCA AAACCAGGAC TTGATGGGCA TGATAGAGGG 
GCTAAAGTGG TTGCAAAAGC TTTGAGAGAT GCGGGAATGG AAGTGATTTA CACAGGTCTA 
AGGCAAACAC CTGAACAAAT AATTAGTGCC GCTATACAAG AAGATGTGGA TATAATTGGC 
CTTTCTATTT TATCTGGCGC GCATATGAGC ATATGCAGGA AAATTCTCAA CTTAATGGAA 
GAAAATAATT TCAATGTACC TGTTTTTGTG GGTGGTATAA TTCCTGCTGA TGATGTAGTT 
GAGCTTAAAA AAATGGGAAT TAAAGAGGTA TTTGGTCCTG GGACTCCTTT AAATACAATT 
GTTGAAAAGA TTAGAGAAAT GTTTACGGGG GTAAAAAGTT GA
 
Protein sequence
MEKKIRVLIA KPGLDGHDRG AKVVAKALRD AGMEVIYTGL RQTPEQIISA AIQEDVDIIG 
LSILSGAHMS ICRKILNLME ENNFNVPVFV GGIIPADDVV ELKKMGIKEV FGPGTPLNTI 
VEKIREMFTG VKS