| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4003 |
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| Symbol | |
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| ID | 5704889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 4554675 |
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| End bp | 4556732 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641273428 |
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| Product | methylmalonyl-CoA mutase, large subunit |
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| Protein accession | YP_001538784 |
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| Protein GI | 159039531 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.446619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000372138 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACGAGA AGGCCCCCCC AGGTCGGCTA CCCGAACGGG ACCGTCCGTG GGTGATGCGA
ACCTACGCCG GGCACAGCTC GGCCGCCGCG ACCAATGCGC TCTTCCGCCG CAACCTGGGA
AAGGGGCAGA CCGGGCTCTC GGTCGCCTTC GACCTGCCCA CCCAGACCGG GTACGACCCC
GATCACGAAC TGGCTGTCGG GGAGGTCGGC CGGGTGGGCG TGCCGGTGGC GCACCTCGGC
GACCTGCGGG CTCTCTTCCA GGGCATTCCG CTGGCCGACA TGAACACCTC GATGACCATC
AACGCCCCGG CGATGTGGCT GCTCGGCCTC TACAGCACCG TCGCCTCCGA GCAGGGGGCC
GAACTCCACA GTTGTGCCGG CACAACCCAG AACGACATCA TCAAGGAGTA CCTGTCCCGC
GGAACGTATA TCTTCCCGCC GGCGGCGTCG CTGCGGCTGA CCGCCGACCT CATCGCGTAC
ACGCTGCGCG AGATGCCCCG GTGGAACCCG GTCAACATCT GCTCGTACCA CCTCCAGGAG
GCGGGGGCCA CGCCGGTCCA GGAGGTCGGC TTCGCGCTCG CCACCGCGGT CGCCGTCCTC
GACGCCGTCC GTGACTCCGG CCAGGTGCCC GCCGAGCGAA TGGGGGACGT GGTCCAGCGA
ATCAGCTTCT TCGTCAACGC CGGAGTCCGG TTCGTCGAGG AGGTCGCCAA GATGCGCGCC
TTCGGTGCGC TCTGGGACGA GATCACCCGC GAACGGTACG GCGTGACGAA CCCGAAACAG
CGCCGCTTTC GCTACGGCGT CCAGGTCAAC TCCCTGGGCC TGACCGAGGC GCAGCCGGAG
AACAACATCC AGCGCATCGT CCTGGAGATG CTCGGCGTGA CCTTCTCCCG AGATGCCCGG
GCTCGGGCGG TGCAGCTCCC CGCCTGGAAC GAGGCGCTCG GCCTACCCCG GCCGTGGGAT
CAGCAGTGGT CGCTGCGGAT GCAGCAGGTG CTCGCGTACG AGTCGGACCT GCTGGAGTAC
CCCGACCTGT TCGACGGCTC GCACGTGATG ACGGCACTGG TCGACAGCAT CGTCTCCGGA
GCTCGGGTCG AGCTGGACAA GGTGCTGGAG ATGGGGGGCG TGGTCGCCGC TGTCGAGACC
GGGTACCTGA AGAGCGCCCT GGTCGCCTCG CTCGCCGACC GGCGTCGTCG AATGGAGGCC
GGCACGGACG TCGTGGTCGG CGTCAACCGG TTCACCGAAA CCGAGCCGTC CCCGCTGACC
GCGGCCGGCG CCGAGGCGAT CGAACAGGTC GATCCGGCGG TGGAGGCTGC CGCCGCGGAC
GCGGTGCGGA ACTGGCGGGC CAGCCGGGAC ACGGCAGCCA CGGACGCCGC ACTCGCCCGG
CTGCGCGCGG ACGCCGCGTC CACCACGAAC CTGATGCCGG CCACGCTGGC CTGCGTCCGC
GCAGGTGTCA CCACCGGTGA GTGGGCGGGC GCGTTGCGGC AGGTGTTCGG GGAGTACCGG
GCCCCCACCG GCCTGTCCGG GTCGGCTGGC TCCGGCGGGG ACGTCACCCT GTCGGCGGTC
CGGGCCCGGG TGGCTGCCAC CGCCCGACAG TTGGGCAGCG GACGGCTGCG GCTGCTGGTC
GGCAAGCCCG GTCTGGACGG GCACTCCAAC GGCGCCGAGC AGATCGCGGT TCGGGCCCGT
GACGCGGGCT TCGAGGTCGT CTACCAAGGC ATCCGGCTGA CCGCTGGGCA GATCGTGGCC
GCCGCCGTCG AGGAGGACGT CGACCTGGTC GGTCTGTCGG TTCTCTCCGG TTCGCACCTT
GCGGCCGTGC CGGCCGTCCT GGACGGTCTG CGTGCCGCCG GCCGCGGCGA CATGCCCGTC
GTCGTCGGCG GCATCATTCC TGAGACGGAC ACGCAGACCC TTCGGGACGC CGGAGTCGTC
CGGGTCTTCA CGCCGAAGGA TTTCGCGCTC ACCGACGTCA TCGACGAGTT GGTGACCGTG
GTTCGCCACG CCAACGGGCT GCCGGAGGAG GACGGGCCGT CGCCGGCACC GGGCTTCGAA
AAGGCGCACC GGCGCTGA
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| Protein sequence | MDEKAPPGRL PERDRPWVMR TYAGHSSAAA TNALFRRNLG KGQTGLSVAF DLPTQTGYDP
DHELAVGEVG RVGVPVAHLG DLRALFQGIP LADMNTSMTI NAPAMWLLGL YSTVASEQGA
ELHSCAGTTQ NDIIKEYLSR GTYIFPPAAS LRLTADLIAY TLREMPRWNP VNICSYHLQE
AGATPVQEVG FALATAVAVL DAVRDSGQVP AERMGDVVQR ISFFVNAGVR FVEEVAKMRA
FGALWDEITR ERYGVTNPKQ RRFRYGVQVN SLGLTEAQPE NNIQRIVLEM LGVTFSRDAR
ARAVQLPAWN EALGLPRPWD QQWSLRMQQV LAYESDLLEY PDLFDGSHVM TALVDSIVSG
ARVELDKVLE MGGVVAAVET GYLKSALVAS LADRRRRMEA GTDVVVGVNR FTETEPSPLT
AAGAEAIEQV DPAVEAAAAD AVRNWRASRD TAATDAALAR LRADAASTTN LMPATLACVR
AGVTTGEWAG ALRQVFGEYR APTGLSGSAG SGGDVTLSAV RARVAATARQ LGSGRLRLLV
GKPGLDGHSN GAEQIAVRAR DAGFEVVYQG IRLTAGQIVA AAVEEDVDLV GLSVLSGSHL
AAVPAVLDGL RAAGRGDMPV VVGGIIPETD TQTLRDAGVV RVFTPKDFAL TDVIDELVTV
VRHANGLPEE DGPSPAPGFE KAHRR
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