| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3062 |
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| Symbol | |
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| ID | 3836508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 3526474 |
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| End bp | 3528489 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637827177 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_428144 |
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| Protein GI | 83594392 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGGTG ATGCCGCCTC CACGCCCAAG CCCAAGCTGC AAACTCGGGA TAAGCCCTGG
CTTTTCCGAA CCTATTCGGG GCATTCCTCG GCCCGGGCGT CGAACGCCCT CTATCGAACG
AATCTTGCGC GGGGTCAGAC CGGGCTGTCC GTCGCCTTCG ATCTTCCGAC TCAGACCGGC
TATGACAGCG ACCATGTTCT GGCGCGCGGC GAGGTCGGCA AGGTCGGCGT GCCGATCAGC
CATCTGGGCG ACATGCAAAC CCTGTTCGAG GGGATTCCCC TTGAAAAGAT GAACACCTCG
ATGACGATCA ACGCTCCGGC GCCGTGGCTG CTGGCGCTTT ATGTCGCCAC CGCCGAGCGC
CAGGGCGCCG ATCGCGCCGC CCTTCAGGGC ACGGTGCAGA ACGATCTGAT CAAGGAATAC
CTGAGCCGGG GCACTTATAT CTTCCCGCCC GAGCCCTCGC TGCGGCTGAT CGGCGATGTC
ATCGCCTTCA CCTATCGCGA GATTCCCAAA TGGAATCCGA CCAACGTCTG CTCCTATCAC
CTACAGGAAG CCGGGGCGAC GCCCGAGCAG GAGCTGGCCT TCGCCCTGGC CACGGCGATC
GCCGTGCTTG ATACGGTGAA GGCCGGCGGT CAGGTACCCG AAGCCGATTT CCCCGAGGTG
GTCGGGCGCA TCAGCTTTTT CGTCAACGCC GGCATCCGCT TCATCACCGA GATGTGCAAG
ATGCGGGCGT TCTGCGACCT GTGGGATGAA ATCTGCCTGA CGCGCTATGG CGTCACCGAC
GAGAAGTTCC GCCGCTTCCG CTATGGGGTG CAGGTCAATT CCCTGGGGTT GACCGAACAG
CAGCCCGAAA ACAACGTCTA TCGCATCTTG CTTGAGATGC TGGCGGTGGT CTTGTCAAAG
AACGCCCGGG CGCGCGCCGT GCAGCTTCCC GCCTGGAACG AGGCGCTGGG CCTGCCCCGG
CCCTGGGATC AGCAATGGTC GCTGCGCCTT CAGCAGATCG TCGCCTTCGA GACCGATCTG
CTCGATTACG GCGATATCTT CGACGGCTCG CGCGAAATCG CCGCCAAGGT TGAAGAGCTT
AAAACCGCCG CCCGCGACGA ATTGGCGCGC ATCGCCGCCA TGGGCGGGGC CGAGGCGGCG
GTTGAAGCCG GCTACATGAA GCAGAAGCTG GTCGAGAGCA ACAGCCGGCG CATCGGCGGC
ATCGAAAGCG GCGAGCAGAT CGTCGTCGGC GTCAATAAAT ACACCGAAGG CGCCGATAGC
CCGCTGGTCG GCGGCGACGG GGCGATCATG ACCGTCGATC CCGCCGTCGA GGCCGAGCAG
ATCGCCGCCC TTACGGCCTG GAAGGCGGCG CGCGACGCCA AGGACGTGGG GGCGGCCCTG
GATGGTTTAC GCCGGGCGGC GGCGGAAGGC ACCAATATCA TGGAGCCGAC CATCGCCTGC
GCCCATGCCG GGGTGACCAC CGGCGAATGG TCGCAGACCC TGCGCGAGGT GTTTGGCGAA
TACCGGGCGC CGACCGGAGT CGGGCGGGCG GCGGCCCAGC CCGAAGCCGG CGGCCGGCTG
GCCGAGGTGC GCCTTCGGGT GGATGATCTG TCGACCCGGC TGGGGCGGCG GCTGAAGATC
CTGGTCGGCA AGCCCGGGCT GGATGGCCAT TCCAACGGCG CCGAGCAGAT CGCCGTGCGG
GCGCGGGATT CGGGGATGGA GGTGGTCTAT GAGGGCATCC GCCTGACCCC GGCGCAGATC
GTCAATGCCG CCCTTGAGGA AAGCGTTCAC GTCGTTGGGC TGTCGATCCT GTCGGGGTCG
CATGTGCCGC TGGTCAGCGA TGTGCTTGAC CGCATGCGGG CCGAGGGGCT GGCCGATATT
CCGGTGATCG TCGGCGGCAT CATTCCGCCC GAGGACGAAA AGATCCTGCT GGCCGCCGGC
GTCGCCCGCG TCTACACGCC CAAGGATTAC GATATCACCG CGATCATGGC CGATATCGTC
GGCATCGTCG ATCTGACCAC CCGTCAGGCG GCGTAA
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| Protein sequence | MSGDAASTPK PKLQTRDKPW LFRTYSGHSS ARASNALYRT NLARGQTGLS VAFDLPTQTG
YDSDHVLARG EVGKVGVPIS HLGDMQTLFE GIPLEKMNTS MTINAPAPWL LALYVATAER
QGADRAALQG TVQNDLIKEY LSRGTYIFPP EPSLRLIGDV IAFTYREIPK WNPTNVCSYH
LQEAGATPEQ ELAFALATAI AVLDTVKAGG QVPEADFPEV VGRISFFVNA GIRFITEMCK
MRAFCDLWDE ICLTRYGVTD EKFRRFRYGV QVNSLGLTEQ QPENNVYRIL LEMLAVVLSK
NARARAVQLP AWNEALGLPR PWDQQWSLRL QQIVAFETDL LDYGDIFDGS REIAAKVEEL
KTAARDELAR IAAMGGAEAA VEAGYMKQKL VESNSRRIGG IESGEQIVVG VNKYTEGADS
PLVGGDGAIM TVDPAVEAEQ IAALTAWKAA RDAKDVGAAL DGLRRAAAEG TNIMEPTIAC
AHAGVTTGEW SQTLREVFGE YRAPTGVGRA AAQPEAGGRL AEVRLRVDDL STRLGRRLKI
LVGKPGLDGH SNGAEQIAVR ARDSGMEVVY EGIRLTPAQI VNAALEESVH VVGLSILSGS
HVPLVSDVLD RMRAEGLADI PVIVGGIIPP EDEKILLAAG VARVYTPKDY DITAIMADIV
GIVDLTTRQA A
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