| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2855 |
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| Symbol | mutB |
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| ID | 5710706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3013589 |
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| End bp | 3015562 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641268781 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_001534189 |
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| Protein GI | 159045395 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCATGA CCGAGACCAA GAAAGACCGC CCCTGGCTGT TTCGCACCTA TGCCGGGCAC
TCCACGGCGG AGGCCTCCAA CGCGCTCTAT CGCGGCAACC TCGCCAAGGG GCAGACCGGG
CTGTCGGTGG CCTTCGACCT GCCGACCCAG ACCGGCTATG ACAGCGACCA TGTCCTGAGC
CGGGGCGAGG TCGGCAAGGT CGGCGTGCCG GTGGCGCATC TGGGCGACAT GCGGGCGCTC
TTCAAGGACA TCCCCCTCGA CCAGATGAAC ACCTCGATGA CGATCAACGC GACCGCGCCC
TGGCTGCTGT CGCTCTACAT CGCCGTGGCC GAGGAACAGG GCGCGGACGT GACGAAACTG
CAAGGCACGG TGCAGAACGA CATCATCAAG GAATACCTCT CCCGCGGCAC CTATATCTGC
CCGCCCAAAC CGTCCCTGCG GATGATCACC GACGTGGCCG CCTATACCCG CGAACACCTG
CCCAAATGGA ACCCGATGAA CGTCTGCTCC TACCACCTGC AAGAGGCAGG GGCGACCCCG
GAGCAGGAGC TGGCCTTCGC GCTGGCCACC GCCACCGCCG TGCTCGACGA TCTCAAGGGC
AAGGTCCCGG CCGAACATTT CCCGGCCATG GTGGGCCGGA TCTCGTTCTT CGTGAACGCG
GGCATCCGCT TTGTCACCGA GATGTGCAAG ATGCGCGCCT TCGTCACCCT GTGGGACGAG
ATCTGCCGCG ACCGCTACGG CGTCGAGGAC CCGAAATTCC GCCGCTTCCG CTACGGGGTG
CAGGTGAACT CCCTGGGCCT GACCGAGCAG CAGCCGGAAA ACAACGTCTA CCGCATCCTG
ATCGAGATGC TGGCCGTGAC CCTGTCGAAA AACGCCCGTG CCCGCGCGGT GCAGCTGCCC
GCCTGGAACG AGGCCCTTGG CCTGCCCCGC CCCTGGGACC AGCAATGGTC GCTCAGGATG
CAGCAGATCA TGGCGCTGGA AACCGACCTT CTGGAGTTCG ACGACCTCTT CGACGGCAAC
CCGGCGGTGG ACCGCAAGGT GGCCGAGCTG ATGGAAGGCG CGCGCGCCGA ACTGGCCACC
ATCGACGGGA TGGGCGGGGC CGTGGCCGCG ATCGAATACA TGAAATCCCG GCTGGTGGAG
GCGAACTCCG ACCGGCTCGG CCGGATCGAG GGGGGCGAGA CCGTGGTGGT CGGCGTCAAC
AAGTACCAGC AGGGCGAGCC CTCGCCGCTG ATGGATGCCG ATGGCGGGAT CATGGTGGTG
GACCCCGCGG TGGAGGCCGA CCAGATCGCC CGGCTCCAGG CCTGGCGCGC CGCCCGCGAC
GAGGACGCGG CGCAAAAGGC GCTGGCCGAT CTGCGCGAGG CCGCGCTTTC GGGGGCCAAT
GTCATGCCCG CCTCCATCGC GGCAGCCAAG GCCGGGGTGA CCACGGGCGA ATGGGGGCTG
GAGATCCGCA AATCCTTCGG CGAGTACCGC GCGCCCACGG GCGTGTCCGC GAACCCGTCG
AACCGCACCG AGGGGCTGGA CGAGATCCGC GACGCGGTCT CGGCGGTGTC GGCCAAGCTG
GGCCGCAAGC TCAAGTTCCT GGTGGGCAAG CCCGGGCTCG ACGGCCATTC CAACGGCGCC
GAGCAGATCG CCGCCCGCGC CCGCGATTGC GGCATGGACA TCACCTATGA GGGCATCCGC
CTGACGCCCG AGGAAATCGT GCGCGCCGCG CGGGAACAGG ACGCCCATGT GGTCGGCCTG
TCGATCCTGT CGGGCTCCCA CATCCCCCTG ATCGAGGAAC TGATGGGCCG GATGCGCGAG
GCCGATCTGA CCCATATCCC GGTGATCGTG GGCGGGATCA TCCCCGAGGA CGACGCCGAG
CGGCTGCGCG CCATGGGCGT GGCGAAGGTC TACACGCCGA AGGATTTCGA GCTGAACCGG
ATCATGTTCG ACATCGTCGG CCTGGTGGAC GACACCCCGA TCGCGGCGGA ATAG
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| Protein sequence | MPMTETKKDR PWLFRTYAGH STAEASNALY RGNLAKGQTG LSVAFDLPTQ TGYDSDHVLS
RGEVGKVGVP VAHLGDMRAL FKDIPLDQMN TSMTINATAP WLLSLYIAVA EEQGADVTKL
QGTVQNDIIK EYLSRGTYIC PPKPSLRMIT DVAAYTREHL PKWNPMNVCS YHLQEAGATP
EQELAFALAT ATAVLDDLKG KVPAEHFPAM VGRISFFVNA GIRFVTEMCK MRAFVTLWDE
ICRDRYGVED PKFRRFRYGV QVNSLGLTEQ QPENNVYRIL IEMLAVTLSK NARARAVQLP
AWNEALGLPR PWDQQWSLRM QQIMALETDL LEFDDLFDGN PAVDRKVAEL MEGARAELAT
IDGMGGAVAA IEYMKSRLVE ANSDRLGRIE GGETVVVGVN KYQQGEPSPL MDADGGIMVV
DPAVEADQIA RLQAWRAARD EDAAQKALAD LREAALSGAN VMPASIAAAK AGVTTGEWGL
EIRKSFGEYR APTGVSANPS NRTEGLDEIR DAVSAVSAKL GRKLKFLVGK PGLDGHSNGA
EQIAARARDC GMDITYEGIR LTPEEIVRAA REQDAHVVGL SILSGSHIPL IEELMGRMRE
ADLTHIPVIV GGIIPEDDAE RLRAMGVAKV YTPKDFELNR IMFDIVGLVD DTPIAAE
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