Gene Afer_0318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0318 
Symbol 
ID8322373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp330385 
End bp330873 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content68% 
IMG OID644951466 
Productcobalamin B12-binding domain protein 
Protein accessionYP_003108959 
Protein GI256371135 
COG category[I] Lipid transport and metabolism 
COG ID[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) 
TIGRFAM ID[TIGR00640] methylmalonyl-CoA mutase C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTCAGG CCACGGGACG GCTCGACTGG AGCGCGAAGG ACGCCCTTGC TAGGCTTGCC 
CGCGTGCTTC GTCCCTACAG AGTGGTTGTC GCCAAGCCCG GACTCGACGG CCACGACCGT 
GGAGCGAAGG TCGTCGCTCG AGCGCTGCGC GACGCTGGCT TCGAGGTCAT CTACACCGGT 
CTGCACCAAA CGGTCGAGCA GATCGTCGAG ACCGTGCTCC AAGAGGATGC GGACGCGCTC 
GGCGTGTCGC TGCTGTCCGG CGCGCACCTG ACCCTCGTCC CACGGCTCGT CGACGCGCTC 
GCTGCGCAGG GCCTTGGACA CGTGCTGATC GTCGTCGGCG GCATCATTCC CGAGCACGAT 
ATCGATGCCC TGCTCGGGCT CGGCGTGGGC CGTGTGTTCA CGCCAGGGTC GTCGCTGACC 
GAGATCACGT CGTGGCTCGA GGCGCAACTC GATGAGCGGG AGCGCACTGG AGCCGGGCAG 
GGAGGATAG
 
Protein sequence
MAQATGRLDW SAKDALARLA RVLRPYRVVV AKPGLDGHDR GAKVVARALR DAGFEVIYTG 
LHQTVEQIVE TVLQEDADAL GVSLLSGAHL TLVPRLVDAL AAQGLGHVLI VVGGIIPEHD 
IDALLGLGVG RVFTPGSSLT EITSWLEAQL DERERTGAGQ GG