Gene GM21_1548 details

Gene Information

• Locus tag: GM21_1548
• ID: 8136878
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: +
• Start bp: 1808331
• End bp: 1808735
• Gene Length: 405 bp
• Protein Length: 134 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 644869161
• Product: cobalamin B12-binding domain protein
• Protein accession: YP_003021362
• Protein GI: 253700173
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding)
• TIGRFAM ID: [TIGR00640] methylmalonyl-CoA mutase C-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 35
• Fosmid unclonability p-value: 0.0000000166361
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGGCTGAAA GAAGAATACG TGTGCTGGTA GGTAAGCCGG GTCTGGACGG CCATGACAGG 
GGAGCCAAGA TCATCGCCCG CGCATTCCGC GACGCCGGTT TCGAGGTCAT CTATACCGGG 
CTGCACCAGA CTCCCGAACA GATCGTTTCC GCCGCGATCC AGGAAGACGT CGACTGCGTG 
GCGCTCTCGA TCCTCTCCGG CGCTCACAAT ACGCTGCTGC CGGCGGTGAG GGAGATCATG 
AAGGAAAAAG GGGCGGGGGA CATCGTTCTC ATGGCTGGCG GCGTCATCCC GGAGGACGAC 
ATCCCCGGCC TCAAGGCTGC CGGCATCGCC GAGGTCTTTA CCCCGGGTAC CTCGACCGAG 
ACCATCGTCG CCTGGATGCG CGACAACGTG ACTCCGCACG CCTAA 

 

Protein sequence

MAERRIRVLV GKPGLDGHDR GAKIIARAFR DAGFEVIYTG LHQTPEQIVS AAIQEDVDCV 
ALSILSGAHN TLLPAVREIM KEKGAGDIVL MAGGVIPEDD IPGLKAAGIA EVFTPGTSTE 
TIVAWMRDNV TPHA