245 homologs were found in PanDaTox collection
for query gene Gmet_2208 on replicon NC_007517
Organism: Geobacter metallireducens GS-15



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007517  Gmet_2208  methylmalonyl-CoA mutase-like  100 
 
 
135 aa  270  7e-72  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00000192903  normal  0.0126749 
 
 
-
 
NC_008009  Acid345_1432  methylmalonyl-CoA mutase  47.29 
 
 
140 aa  115  3e-25  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.329321 
 
 
-
 
NC_013525  Tter_1673  cobalamin B12-binding domain protein  48.46 
 
 
153 aa  112  2.0000000000000002e-24  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008025  Dgeo_1541  methylmalonyl-CoA mutase, alpha subunit  42.42 
 
 
151 aa  112  2.0000000000000002e-24  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.0770461  normal 
 
 
-
 
NC_014210  Ndas_0059  cobalamin B12-binding domain protein  40.77 
 
 
136 aa  110  8.000000000000001e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  hitchhiker  0.000107152 
 
 
-
 
NC_010320  Teth514_1854  cobalamin B12-binding domain-containing protein  45.8 
 
 
137 aa  107  5e-23  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_0241  cobalamin B12-binding domain protein  42.97 
 
 
139 aa  105  2e-22  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_0582  cobalamin B12-binding domain-containing protein  45.6 
 
 
133 aa  105  2e-22  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2691  cobalamin B12-binding domain protein  40.77 
 
 
134 aa  104  3e-22  Geobacter bemidjiensis Bem  Bacteria  normal  0.0118523  n/a   
 
 
-
 
NC_013061  Phep_4240  cobalamin B12-binding domain protein  42.97 
 
 
139 aa  104  4e-22  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_3814  cobalamin B12-binding domain-containing protein  36.92 
 
 
134 aa  104  4e-22  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
CP001800  Ssol_0081  cobalamin B12-binding domain protein  41.79 
 
 
141 aa  104  5e-22  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_009953  Sare_4204  cobalamin B12-binding domain-containing protein  36.92 
 
 
134 aa  104  5e-22  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00605014 
 
 
-
 
NC_012918  GM21_1548  cobalamin B12-binding domain protein  40 
 
 
134 aa  102  2e-21  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000166361 
 
 
-
 
NC_008148  Rxyl_2369  methylmalonyl-CoA mutase-like protein  39.06 
 
 
133 aa  102  2e-21  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.308524  n/a   
 
 
-
 
NC_008146  Mmcs_3825  methylmalonyl-CoA mutase C-terminal domain-containing protein  39.06 
 
 
132 aa  101  3e-21  Mycobacterium sp. MCS  Bacteria  normal  0.438631  n/a   
 
 
-
 
NC_008705  Mkms_3899  cobalamin B12-binding domain-containing protein  39.06 
 
 
132 aa  101  3e-21  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_0587  cobalamin B12-binding domain protein  45.74 
 
 
135 aa  102  3e-21  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.901029 
 
 
-
 
NC_013595  Sros_1242  methylmalonyl-CoA mutase  42.06 
 
 
135 aa  101  3e-21  Streptosporangium roseum DSM 43021  Bacteria  normal  hitchhiker  0.00778509 
 
 
-
 
NC_009077  Mjls_3811  cobalamin B12-binding domain-containing protein  39.06 
 
 
132 aa  101  3e-21  Mycobacterium sp. JLS  Bacteria  normal  0.0469463  normal  0.0948206 
 
 
-
 
NC_013131  Caci_7994  cobalamin B12-binding domain protein  40 
 
 
135 aa  101  3e-21  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_1322  cobalamin B12-binding domain-containing protein  45.38 
 
 
136 aa  101  4e-21  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1574  methylmalonyl-CoA mutase-like  36.92 
 
 
134 aa  100  6e-21  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000332572  normal  0.305791 
 
 
-
 
NC_007760  Adeh_1832  methylmalonyl-CoA mutase  40.31 
 
 
140 aa  100  6e-21  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.436511  n/a   
 
 
-
 
NC_011145  AnaeK_2028  cobalamin B12-binding domain protein  39.53 
 
 
140 aa  100  7e-21  Anaeromyxobacter sp. K  Bacteria  normal  0.655901  n/a   
 
 
-
 
NC_013216  Dtox_1910  cobalamin B12-binding domain protein  40 
 
 
134 aa  100  7e-21  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.374857  normal  0.0962097 
 
 
-
 
NC_011891  A2cp1_2098  cobalamin B12-binding domain protein  39.53 
 
 
140 aa  100  8e-21  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1769  cobalamin B12-binding domain-containing protein  41.54 
 
 
134 aa  100  8e-21  Desulfotomaculum reducens MI-1  Bacteria  decreased coverage  0.00734137  n/a   
 
 
-
 
NC_009440  Msed_2055  cobalamin B12-binding domain-containing protein  41.79 
 
 
155 aa  99.8  1e-20  Metallosphaera sedula DSM 5348  Archaea  normal  normal 
 
 
-
 
NC_009483  Gura_2026  cobalamin B12-binding domain-containing protein  39.23 
 
 
134 aa  98.6  2e-20  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000113125  n/a   
 
 
-
 
NC_002939  GSU1578  B12-binding protein  36.15 
 
 
134 aa  98.6  3e-20  Geobacter sulfurreducens PCA  Bacteria  normal  0.432317  n/a   
 
 
-
 
NC_008554  Sfum_0457  cobalamin B12-binding domain-containing protein  40 
 
 
133 aa  98.6  3e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.364165 
 
 
-
 
NC_010085  Nmar_0958  cobalamin B12-binding domain-containing protein  38.64 
 
 
140 aa  97.1  7e-20  Nitrosopumilus maritimus SCM1  Archaea  n/a    hitchhiker  0.0044288 
 
 
-
 
NC_009483  Gura_3482  cobalamin B12-binding domain-containing protein  38.46 
 
 
134 aa  97.1  7e-20  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_1574  cobalamin B12-binding domain-containing protein  39.68 
 
 
137 aa  97.1  8e-20  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.0630027 
 
 
-
 
NC_009675  Anae109_1989  cobalamin B12-binding domain-containing protein  40 
 
 
139 aa  96.3  1e-19  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4309  cobalamin B12-binding domain-containing protein  41.32 
 
 
133 aa  96.3  1e-19  Frankia sp. EAN1pec  Bacteria  normal  normal  0.734858 
 
 
-
 
NC_012029  Hlac_0510  cobalamin B12-binding domain protein  40.48 
 
 
139 aa  95.9  1e-19  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.736031  normal  0.90311 
 
 
-
 
NC_010003  Pmob_0550  cobalamin B12-binding domain-containing protein  42.86 
 
 
133 aa  95.5  2e-19  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_1715  cobalamin B12-binding domain protein  39.68 
 
 
139 aa  95.5  2e-19  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_0377  methylmalonyl-CoA mutase-like  36.72 
 
 
158 aa  95.9  2e-19  Acidothermus cellulolyticus 11B  Bacteria  normal  0.99713  normal 
 
 
-
 
NC_008609  Ppro_0388  cobalamin B12-binding domain-containing protein  37.69 
 
 
134 aa  95.5  2e-19  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.000031654  n/a   
 
 
-
 
NC_009767  Rcas_2998  cobalamin B12-binding domain-containing protein  43.75 
 
 
134 aa  95.5  2e-19  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.651513  normal  0.0337584 
 
 
-
 
NC_010718  Nther_1487  cobalamin B12-binding domain protein  40.32 
 
 
135 aa  95.9  2e-19  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.40083  normal  0.12756 
 
 
-
 
NC_009621  Smed_5088  cobalamin B12-binding domain-containing protein  45.37 
 
 
153 aa  95.1  3e-19  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013124  Afer_0318  cobalamin B12-binding domain protein  38.98 
 
 
162 aa  94.7  4e-19  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_013922  Nmag_2472  cobalamin B12-binding domain protein  40.48 
 
 
152 aa  94.4  5e-19  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013522  Taci_0289  cobalamin B12-binding domain protein  40 
 
 
140 aa  94  6e-19  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3654  cobalamin B12-binding domain-containing protein  38.89 
 
 
135 aa  92.8  1e-18  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.136466 
 
 
-
 
NC_009523  RoseRS_2024  cobalamin B12-binding domain-containing protein  42.19 
 
 
134 aa  93.2  1e-18  Roseiflexus sp. RS-1  Bacteria  normal  decreased coverage  0.000794891 
 
 
-
 
NC_013744  Htur_4360  cobalamin B12-binding domain protein  38.93 
 
 
138 aa  92  2e-18  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.36975  n/a   
 
 
-
 
NC_013202  Hmuk_2805  cobalamin B12-binding domain protein  37.5 
 
 
142 aa  92.4  2e-18  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.069341  normal 
 
 
-
 
NC_011830  Dhaf_2692  cobalamin B12-binding domain protein  40.94 
 
 
140 aa  92  2e-18  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3987  cobalamin B12-binding domain-containing protein  42.75 
 
 
137 aa  91.7  3e-18  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0195294  n/a   
 
 
-
 
NC_009717  Xaut_5018  cobalamin B12-binding domain-containing protein  35.34 
 
 
135 aa  91.3  4e-18  Xanthobacter autotrophicus Py2  Bacteria  normal  0.622944  normal 
 
 
-
 
NC_013743  Htur_0900  cobalamin B12-binding domain protein  39.23 
 
 
138 aa  91.3  4e-18  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013440  Hoch_3774  cobalamin B12-binding domain protein  38.71 
 
 
157 aa  91.3  5e-18  Haliangium ochraceum DSM 14365  Bacteria  normal  0.137195  normal  0.13274 
 
 
-
 
NC_013744  Htur_3836  cobalamin B12-binding domain protein  38.93 
 
 
138 aa  89.7  1e-17  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.692162  n/a   
 
 
-
 
NC_008726  Mvan_4260  cobalamin B12-binding domain-containing protein  36.72 
 
 
133 aa  90.1  1e-17  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.480541 
 
 
-
 
NC_008826  Mpe_B0538  methylmalonyl-CoA mutase C-terminal domain-containing protein  35.43 
 
 
136 aa  89  2e-17  Methylibium petroleiphilum PM1  Bacteria  normal  decreased coverage  0.000893241 
 
 
-
 
NC_009338  Mflv_2388  cobalamin B12-binding domain-containing protein  40 
 
 
133 aa  89  2e-17  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.698998  normal 
 
 
-
 
NC_013739  Cwoe_4641  cobalamin B12-binding domain protein  39.68 
 
 
143 aa  87.8  4e-17  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.123677 
 
 
-
 
NC_013947  Snas_6220  cobalamin B12-binding domain-containing protein  37.5 
 
 
134 aa  86.7  9e-17  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_3591  cobalamin B12-binding domain-containing protein  37.5 
 
 
143 aa  86.3  1e-16  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1034  methylmalonyl-CoA mutase, large subunit  39.81 
 
 
666 aa  81.3  0.000000000000004  Frankia sp. EAN1pec  Bacteria  normal  0.488774  normal  0.762762 
 
 
-
 
NC_013926  Aboo_1359  cobalamin B12-binding domain protein  35.54 
 
 
128 aa  81.3  0.000000000000004  Aciduliprofundum boonei T469  Archaea  hitchhiker  0.000000000160657  n/a   
 
 
-
 
NC_008699  Noca_1772  methylmalonyl-CoA mutase  40.37 
 
 
680 aa  81.6  0.000000000000004  Nocardioides sp. JS614  Bacteria  normal  0.292142  n/a   
 
 
-
 
NC_009953  Sare_4003  methylmalonyl-CoA mutase, large subunit  35.96 
 
 
685 aa  80.9  0.000000000000005  Salinispora arenicola CNS-205  Bacteria  normal  0.446619  hitchhiker  0.000372138 
 
 
-
 
NC_007777  Francci3_2169  methylmalonyl-CoA mutase  38.53 
 
 
692 aa  80.5  0.000000000000008  Frankia sp. CcI3  Bacteria  normal  0.485789  normal  0.751366 
 
 
-
 
NC_009380  Strop_3621  methylmalonyl-CoA mutase, large subunit  37.61 
 
 
668 aa  79.7  0.00000000000001  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_1197  methylmalonyl-CoA mutase, large subunit  40.19 
 
 
657 aa  79.3  0.00000000000002  Xanthobacter autotrophicus Py2  Bacteria  normal  0.282186  normal 
 
 
-
 
NC_013235  Namu_1263  cobalamin B12-binding domain protein  40 
 
 
149 aa  78.2  0.00000000000003  Nakamurella multipartita DSM 44233  Bacteria  normal  0.728671  normal  0.8637 
 
 
-
 
NC_010725  Mpop_5337  methylmalonyl-CoA mutase  33.08 
 
 
721 aa  78.2  0.00000000000004  Methylobacterium populi BJ001  Bacteria  normal  0.759699  normal 
 
 
-
 
NC_010511  M446_3042  methylmalonyl-CoA mutase  33.08 
 
 
720 aa  77.8  0.00000000000005  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.057217 
 
 
-
 
NC_011757  Mchl_5261  methylmalonyl-CoA mutase  32.31 
 
 
721 aa  77  0.00000000000007  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.145645  normal 
 
 
-
 
NC_013441  Gbro_2420  methylmalonyl-CoA mutase, large subunit  35.94 
 
 
763 aa  77  0.00000000000007  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_4794  methylmalonyl-CoA mutase  32.31 
 
 
721 aa  77  0.00000000000007  Methylobacterium extorquens PA1  Bacteria  normal  0.134601  normal  0.670991 
 
 
-
 
NC_007964  Nham_2638  methylmalonyl-CoA mutase  31.54 
 
 
720 aa  77  0.00000000000007  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_2300  methylmalonyl-CoA mutase  37.5 
 
 
709 aa  77  0.00000000000009  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_2192  methylmalonyl-CoA mutase  36.67 
 
 
709 aa  76.3  0.0000000000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.172259  n/a   
 
 
-
 
NC_007643  Rru_A3062  methylmalonyl-CoA mutase  36.94 
 
 
671 aa  76.3  0.0000000000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3538  methylmalonyl-CoA mutase  32.31 
 
 
736 aa  76.3  0.0000000000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.162308  normal  0.256268 
 
 
-
 
NC_011894  Mnod_4573  methylmalonyl-CoA mutase  32.31 
 
 
720 aa  76.3  0.0000000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0867  methylmalonyl-CoA mutase  36.67 
 
 
709 aa  76.3  0.0000000000001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.134958  normal 
 
 
-
 
NC_009485  BBta_3021  methylmalonyl-CoA mutase  31.54 
 
 
718 aa  76.3  0.0000000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.954275 
 
 
-
 
NC_009952  Dshi_0726  methylmalonyl-CoA mutase  37.7 
 
 
712 aa  76.6  0.0000000000001  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.999011  normal 
 
 
-
 
NC_010831  Cphamn1_1173  methylmalonyl-CoA mutase, large subunit  35.59 
 
 
1106 aa  75.9  0.0000000000002  Chlorobium phaeobacteroides BS1  Bacteria  normal  decreased coverage  0.00593374 
 
 
-
 
NC_007643  Rru_A2479  methylmalonyl-CoA mutase  32.31 
 
 
732 aa  75.9  0.0000000000002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_3367  methylmalonyl-CoA mutase  40 
 
 
709 aa  75.5  0.0000000000002  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008687  Pden_3681  methylmalonyl-CoA mutase  39.09 
 
 
714 aa  75.9  0.0000000000002  Paracoccus denitrificans PD1222  Bacteria  normal  0.542374  normal 
 
 
-
 
NC_013739  Cwoe_4193  methylmalonyl-CoA mutase, large subunit  41.12 
 
 
670 aa  75.9  0.0000000000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.669168  normal  0.90036 
 
 
-
 
NC_007925  RPC_1760  methylmalonyl-CoA mutase  32.31 
 
 
718 aa  75.1  0.0000000000003  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.226069 
 
 
-
 
NC_007958  RPD_1927  methylmalonyl-CoA mutase  32.31 
 
 
719 aa  75.1  0.0000000000003  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.273596  normal  0.727114 
 
 
-
 
NC_013595  Sros_3188  Methylmalonyl-CoA mutase  35.59 
 
 
725 aa  75.5  0.0000000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.36577  normal  0.670701 
 
 
-
 
NC_009077  Mjls_3133  methylmalonyl-CoA mutase  36.44 
 
 
760 aa  74.7  0.0000000000003  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_011059  Paes_0875  methylmalonyl-CoA mutase, large subunit  36.44 
 
 
1081 aa  75.1  0.0000000000003  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal  0.036821 
 
 
-
 
NC_013093  Amir_6418  methylmalonyl-CoA mutase  33.85 
 
 
729 aa  74.7  0.0000000000004  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_3122  methylmalonyl-CoA mutase  36.44 
 
 
760 aa  74.7  0.0000000000004  Mycobacterium sp. MCS  Bacteria  normal  0.203405  n/a   
 
 
-
 
NC_008705  Mkms_3183  methylmalonyl-CoA mutase  36.44 
 
 
760 aa  74.7  0.0000000000004  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0724467 
 
 
-
 
NC_011004  Rpal_2039  methylmalonyl-CoA mutase  31.54 
 
 
719 aa  74.7  0.0000000000004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
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