| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4794 |
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| Symbol | |
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| ID | 5834815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 5354528 |
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| End bp | 5356693 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641370591 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_001642233 |
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| Protein GI | 163854190 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.134601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.670991 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCCC GCATCCCCGA TTTCGCCTCC GTCGCCTACG CGGCCGACGG CTTCAAGGCG
CCGCCCCCGC CGGCCGGGGA GCCGTGGATG ACGCCCGAGG GTATTCCGGT GAAGGGCTTC
TACGGCCCCG AGGACCGTGA GGGGTGTGAG GGAATCGACT CGTTCCCCGG CCTGCCGCCC
TACCTGCGTG GCCCCTATCC GGCGATGTAC GTCACCCAAC CCTGGACGAT CCGGCAATAT
GCCGGCTTCT CCACGGCCGA GGATTCGAAC GCCTTCTACC GGCGCAACCT CGCCGCGGGC
CAGAAAGGCC TCTCGGTCGC CTTCGATCTC GCGACCCACC GCGGCTACGA TTCGGACCAC
CCGCGCGTCT CGGGTGATGT TGGCATGGCG GGTGTCGCGA TCGACTCGAT CTACGACATG
CGCACGCTGT TCTCCGGCAT TCCGCTCGAC GAGATGACGG TGTCGATGAC GATGAACGGC
GCGGTGCTGC CAGTGCTCGC GCTCTACATC GTCGCGGCCG AAGAGCAGGG CGTGCCGCCC
GAGAAGCTCG CCGGCACGAT CCAAAACGAC ATCCTCAAGG AGTTCATGGT CCGCAACACC
TACATCTATC CCCCCAAGGG ATCGATGCGG ATCATCTCGG ACATCTTCGG CTACACCTCG
AAGAACATGC CGAAGTTCAA CTCGATCTCG ATCTCCGGCT ACCACATGCA GGAGGCCGGG
GCGACGCAGG ATCTGGAGCT CGCCTACACC CTCGCCGACG GCGTCGAGTA CATCAAGGCC
GGCCTCGCGG CGGGCCTCAC CATCGACCAG TTCGCGCCGC GCCTGTCGTT CTTCTGGGCG
ATCGGGATGA ACTTCTTCAT GGAGATCGCC AAGATGCGGG CCGCGCGCCT GATCTGGGCC
AAGCTCGTCA AGGAGTTCGA GCCGAAATCC GACAAGTCGC TGCCGCTGCG CACCCACTCG
CAGACGAGCG GCTGGTCGCT GACGGCGCAG GACGTGTTCA ACAACGTCAC CCGCACCTGC
ATCGAGGCGA TGGCGGCGAC GCAGGGCGGC ACCCAGTCGC TCCACACCAA CGCGCTCGAC
GAGGCTTTGG CGCTGCCGAC CGACTTCTCG GCGCGCATCG CCCGTAACAC CCAGCTCTTC
CTGCAGCAGG AGAGCGGCAC GACGCGGATC ATCGATCCGT GGGGCGGCTC CTACTATGTC
GAGCGGCTGA CCCGGGACAT CGCCGCGCGC GCCTGGGAGC ATATCCGCGA GGTCGAGGCG
CTCGGCGGCA TGGCGAAAGC CATCGAGGCC GGCATCCCGA AGCTGCGCAT CGAGGAGGCC
GCCGCCCGCG CCCAGGCGCG GATCGATTCT GGGCGCCAGA CCATCGTCGG CATCAACAAG
TACAAGCCCG ACGACGAGAT GAAGATCGAC CTGCTGCGCG TCGACAACGC CGACGTGCGC
GCCAAGCAGA TCGACAAGCT CAAGCGCCTG CGCGCCGAGC GCAACCAGGC CGATGTCGAT
GCGGCTCTGG CCGCTCTGAC GAAGGCCGCG GATGGCGAGG GCAACCTGCT CGAACTGGCG
GTGAACGCGG CGCGGGCCAA GGCCACGGTC GGCGAGATCT CGGAAGCGCT GGAGAAGGCC
TGGGGCCGTC ACCGCGCCGA GATCCGTTCG ATCTCGGGCG TCTACAAGCG GGAGGTGGGC
GGCATGTCGC CGGTGGTGGA GAAGGTCCGC GGCCTCGTCG AGGCCTTCGA GGAGAATGAC
GGGCGCCGCC CGCGCATCCT GGTTGCCAAG ATGGGCCAGG ACGGGCACGA CCGCGGCCAG
AAGGTGATCG CCTCGGCGTT CGCCGATCTC GGCTTCGACG TCGATATCGG GCCGCTCTTC
GCCACGCCCG ACGAGGCGGC ACGCCAAGCG GTAGAGAACG ACGTGCACAT CGTCGGCGTC
TCCTCTCTGG CAGCGGGCCA CCTGACGCTG GTGCCGGAAC TCAAGGCCGC GCTGAAGCAG
GAGGGCCGCG ACGACGTGAT GATCGTGGTC GGCGGCGTGA TCCCGCCGGG CGACTACGAC
GCGCTCTACG CCGCGGGCGC CTCGGCGATC TTCCCGCCGG GCACCGTGAT CGCGGAAGCG
GCCGTGAAGC TTCTGGGCGA ACTCAACACG CGTCTGGGCT ACGGCGAGCG ACAGGCGGCC
GAGTAG
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| Protein sequence | MSSRIPDFAS VAYAADGFKA PPPPAGEPWM TPEGIPVKGF YGPEDREGCE GIDSFPGLPP
YLRGPYPAMY VTQPWTIRQY AGFSTAEDSN AFYRRNLAAG QKGLSVAFDL ATHRGYDSDH
PRVSGDVGMA GVAIDSIYDM RTLFSGIPLD EMTVSMTMNG AVLPVLALYI VAAEEQGVPP
EKLAGTIQND ILKEFMVRNT YIYPPKGSMR IISDIFGYTS KNMPKFNSIS ISGYHMQEAG
ATQDLELAYT LADGVEYIKA GLAAGLTIDQ FAPRLSFFWA IGMNFFMEIA KMRAARLIWA
KLVKEFEPKS DKSLPLRTHS QTSGWSLTAQ DVFNNVTRTC IEAMAATQGG TQSLHTNALD
EALALPTDFS ARIARNTQLF LQQESGTTRI IDPWGGSYYV ERLTRDIAAR AWEHIREVEA
LGGMAKAIEA GIPKLRIEEA AARAQARIDS GRQTIVGINK YKPDDEMKID LLRVDNADVR
AKQIDKLKRL RAERNQADVD AALAALTKAA DGEGNLLELA VNAARAKATV GEISEALEKA
WGRHRAEIRS ISGVYKREVG GMSPVVEKVR GLVEAFEEND GRRPRILVAK MGQDGHDRGQ
KVIASAFADL GFDVDIGPLF ATPDEAARQA VENDVHIVGV SSLAAGHLTL VPELKAALKQ
EGRDDVMIVV GGVIPPGDYD ALYAAGASAI FPPGTVIAEA AVKLLGELNT RLGYGERQAA
E
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