Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0867 |
Symbol | |
ID | 4896924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 885882 |
End bp | 888011 |
Gene Length | 2130 bp |
Protein Length | 709 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640111452 |
Product | methylmalonyl-CoA mutase |
Protein accession | YP_001042750 |
Protein GI | 126461636 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit [COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.134958 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAG ATCTCGATGC GTGGCGCAAG CTCGCCGAGA AGGAGCTGAA GGGCAAGAGC CCCGACAGCC TGACCTGGAA CACGCTGGAG GGCATTCCGG TCAAGCCGCT CTATACCAGG GCCGATCTTG CGGGGATGGA GCATCTCGAC GGGCTGCCCG GGGTCGCGCC CTTCACCCGC GGCGTGCGCG CCACGATGTA TGCGGGCCGC CCCTGGACGA TCCGGCAATA TGCGGGCTTC TCGACCGCCG AGGCCTCGAA CGCCTTCTAC CGCAAGGCGC TGGCCGCGGG GCAGCAGGGC GTCTCGGTGG CCTTCGACCT TGCGACCCAC CGCGGCTACG ACAGCGACCA TCCGCGCGTG GTGGGCGACG TGGGCAAGGC GGGCGTGGCC ATCGACTCGA TCGAGGACAT GAAGATCTTG TTCGACGGCA TCCCGCTCGA GAAGATCTCG GTCTCGATGA CGATGAACGG CGCGGTGATC CCGATCCTCG CCAATTTCAT CGTGACCGGC GAGGAGCAGG GCGTTCCGCG GGCCGCGCTG TCGGGCACGA TCCAGAACGA CATCCTCAAG GAGTTCATGG TCCGCAACAC CTACATCTAT CCGCCCGAGC CCTCGATGCG GATCATTGCG GACATCATCG AATATACCTC GAAGGAGATG CCGAAGTTCA ACTCGATCTC GATCTCCGGC TACCATATGC AGGAGGCGGG GGCGAACCTC GTGCAGGAGC TGGCCTATAC GCTGGCTGAC GGGCGCGAAT ATGTCCGCGC GGCGCTGGCG CGCGGCATGA ATGTGGACGA TTTCGCCGGG CGCCTCAGCT TCTTCTTCGC CATCGGCATG AACTTCTTCA TGGAAGCCGC GAAGCTCCGT GCGGCGCGGC TTCTGTGGCA CCGGATCATG TCCGAATTCG CGCCGAAGAA GCCGGGCAGC CTGATGCTGC GCACCCACTG CCAGACCTCG GGCGTGAGCC TGCAGGAGCA GGACCCCTAC AACAACGTCA TCCGCACCGC CTATGAGGCG ATGTCGGCGG CGCTCGGCGG CACCCAGTCG CTGCATACGA ACGCGCTCGA CGAGGCCATC GCGCTGCCCA CCGAATTCTC GGCCCGGATC GCGCGGAACA CCCAGATCAT CCTGCAGGAA GAGACGGGCG TGACCAGGGT CGTCGATCCG CTCGCAGGCT CCTACTATGT CGAAAGCCTG ACCGCCGAGC TTGCGGAAAA GGCCTGGGCG CTCATTGAGG AGGTCGAGGC CATGGGCGGC ATGACCAAGG CCGTGGCCTC GGGGATGCCG AAGCTCCGGA TCGAGGAATC GGCCGCCCGC CGGCAGGCCG CCATCGACCG TGGCGAGGAT GTGATCGTCG GCGTGAACAA GTATCGCCTC GCCAAGGAGG ATCCGATCGA GATCCTCGAC ATCGATAACG TGGCCGTCCG CGACGCGCAG ATCGCGCGGC TGAAGAAGAT GCGCGCCACC CGCGACGAGG CCGCCTGTCA GGCGGCGCTC GACGAACTGA CCCGCCGCGC CGCCGAGGGC GGCAACCTGC TCGAAGCCGC GGTGGACGCC TCGCGCGCCC GCGCCTCTGT CGGAGAGATC AGCATGGCCA TGGAGAAGGT GTTCGGCCGC CACCGGGCGG AAGTGAAGAC GCTTTCGGGC GTCTATGGCG CGGCCTACGA GGGCGACGAC GGCTTCGCGC AGATCCAGCG CGACGTCGAG AGCTTCGCCG AGGAAGAGGG CCGTCGGCCC CGGATGCTGG TGGTGAAGAT GGGGCAGGAC GGCCACGACC GCGGCGCCAA GGTGATCGCC ACCGCCTTCG CCGACATCGG CTTCGACGTC GATGTGGGCA CCCTGTTCCA GACGCCCGAG GAGGCGGCGC AGGACGCCAT CGACAATGAC GTCCATGTGG TGGGCATCTC CTCGCTGGCC GCGGGCCACA AGACCCTCGC GCCGAAGCTG ATCGAGGCGC TGAAGGAGAA GGGCGCGGGC GAGATCCTCG TGATCTGCGG CGGCGTGATC CCGCAGCAGG ATTACGACTT CCTGCAGCAG GCGGGGGTGA AGGCCATCTT CGGCCCCGGT ACCAACATCC CTTCGGCGGC CAAGCACATC CTCGACCTGA TCCGCGAGGC CCGCAGCTGA
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Protein sequence | MTEDLDAWRK LAEKELKGKS PDSLTWNTLE GIPVKPLYTR ADLAGMEHLD GLPGVAPFTR GVRATMYAGR PWTIRQYAGF STAEASNAFY RKALAAGQQG VSVAFDLATH RGYDSDHPRV VGDVGKAGVA IDSIEDMKIL FDGIPLEKIS VSMTMNGAVI PILANFIVTG EEQGVPRAAL SGTIQNDILK EFMVRNTYIY PPEPSMRIIA DIIEYTSKEM PKFNSISISG YHMQEAGANL VQELAYTLAD GREYVRAALA RGMNVDDFAG RLSFFFAIGM NFFMEAAKLR AARLLWHRIM SEFAPKKPGS LMLRTHCQTS GVSLQEQDPY NNVIRTAYEA MSAALGGTQS LHTNALDEAI ALPTEFSARI ARNTQIILQE ETGVTRVVDP LAGSYYVESL TAELAEKAWA LIEEVEAMGG MTKAVASGMP KLRIEESAAR RQAAIDRGED VIVGVNKYRL AKEDPIEILD IDNVAVRDAQ IARLKKMRAT RDEAACQAAL DELTRRAAEG GNLLEAAVDA SRARASVGEI SMAMEKVFGR HRAEVKTLSG VYGAAYEGDD GFAQIQRDVE SFAEEEGRRP RMLVVKMGQD GHDRGAKVIA TAFADIGFDV DVGTLFQTPE EAAQDAIDND VHVVGISSLA AGHKTLAPKL IEALKEKGAG EILVICGGVI PQQDYDFLQQ AGVKAIFGPG TNIPSAAKHI LDLIREARS
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