Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3681 |
Symbol | |
ID | 4582233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 828616 |
End bp | 830760 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639770991 |
Product | methylmalonyl-CoA mutase |
Protein accession | YP_917444 |
Protein GI | 119386389 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit [COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR00641] methylmalonyl-CoA mutase N-terminal domain [TIGR00642] methylmalonyl-CoA mutase, heterodimeric type, beta chain |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.542374 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAA GCACGAAAGC CGCCCTCGAG GAATGGCGCA GGCTCGCCAG CAAGGAGTTG AAAGGCGCCG ATCCCGACAG CCTGACCTGG CACACGCTGG AAGGGATCGA GGTCAAGCCG CTTTATACCG AGACGGACGT GAAGGACCTG CCGCATCTGG GCAGCCTGCC CGGCATCGAG CCCTTCACCC GCGGCCCGCG CGCCACCATG TATGCCGGCC GGCCCTGGAC CATCCGGCAA TATGCGGGCT TTTCCACCGC CGAGGAATCG AACGCCTTCT ATCGCAAGGC GCTGGCGGCC GGGCAGCAGG GCGTCTCGGT CGCCTTCGAC CTGGCGACGC ATCGCGGCTA TGACAGCGAC CATCCGCGCG TCGAGGGCGA CGTGGGCAAG GCCGGCGTCG CCATCGACAG CGTCGAGGAC ATGAAGATCC TGTTCGACGG CATCCCGCTG GACAAGGTTT CCGTGTCCAT GACCATGAAC GGCGCGGTGA TCCCGGTGCT GGCGAACTTC ATCGTCACCG GCGAGGAACA GGGCCATTCC CGCGCCGTCC TGTCGGGCAC GATCCAGAAC GACATCCTCA AGGAGTTCAT GGTCCGCAAC ACCTATATCT ATCCGCCCGA GCCCTCGATG CGGATCATCG CGGACATCAT CGAATACACC TCGAACGAGA TGCCCAAGTT CAACTCGATC TCGATCTCCG GCTATCACAT GCAGGAGGCG GGCGCGAACC TGGTGCAGGA GCTGGCCTAT ACGCTGGCCG ACGGGCGCGA ATATGTGCGC GCCGCGCTGA AGGCCGGGAT GGACGTGGAC CAGTTCGCGG GGCGGCTGTC CTTCTTCTTC GCCATCGGCA TGAATTTCTT CATGGAGGCG GCCAAGCTGC GCGCGGCGCG GCTGCTGTGG ACGCGCATCA TGAAGGAGTT CGAGCCGAAG AAGCCCGGCT CGCTGATGCT GCGCACCCAT TGCCAGACCT CGGGCGTCAG CCTGCAGGAG CAGGATCCCT ACAACAACGT GGTCCGCACG GCCTACGAGG CGATGGCGGC GGCGCTTGGC GGCACGCAGT CGCTGCACAC CAACGCGCTG GACGAGGCCA TCGCCCTGCC CACCGAGTTC AGCGCGCGGA TCGCAAGGAA CACCCAGCTG ATCCTGCAAG AGGAAACCGG CATCACCCAT GTCGTCGACC CGCTGGCCGG CAGCTATTAC GTCGAAAGCC TGACCGCCCA ACTGGCCGAA AAGGCCTGGG CGCTGATCGA GGAGGTCGAG GCCATGGGCG GCATGACCAA GGCCGTGGCC TCGGGCATGC CCAAGCTGCG CATCGAGGAG ACCGCCGCGC GCCGCCAGGC CCAGATCGAC CGCGGCGAAG AGGTCATCGT CGGCGTGAAC AAGTATCGCC TGGCGAAAGA GGACCCGATC GACATCCTCG ACATCGACAA CATGAAGGTG CGCGACGCCC AGATCGCGCG GCTGAACCGA ATCCGCACGA CGCGGAACGA GGCGACATGC CAGGCGGCGC TGGCCGAACT GTCGCGCCGG GCGAAGGAAG GCGGCAACCT GCTGGAAGCC GCGGTCGAAG CCGCGCGGGC GCGCGCTTCT GTAGGAGAGA TCAGCATGGC GATGGAAAAG GAATTCGGCC GCCACCGCGC CGAGGTCAAG ACCCTGGCCG GCGTCTATGG CGCGGCCTAT GAGGGCGACG ACGATTTCGC GCAGATCCAG CGCGACGTCG AGACCTTCGC CGAAGAAGAG GGCCGCCGCC CGCGCATGCT GGTGGTCAAG ATGGGCCAGG ACGGCCATGA CCGCGGCGCC AAGGTGATCG CCACCGCCTT CGCCGATATC GGCTTCGACG TCGATGTCGG CCCGCTGTTC CAGACCCCCG AGGAAGCCGC ACAGGACGCC ATCGACAACG ACGTGCATGT CGTGGGGATC TCGTCGCAGG CGGCCGGCCA CAAGACGCTG GCGCCCAAGC TGATCGCCGC GCTCAAGGAG CAGGGCGCGG GCGACATCAT CGTGATCTGC GGCGGCGTGA TCCCGCAGCA GGATTACGAT TTCCTCAAGA AGGCCGGGGT AAAGGCGATC TTCGGGCCGG GGACCAACAT CCCCTCGGCC GCGCGCGACA TCCTGTCGCT GATCCGCGCG GCGCGGGCGG CGTGA
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Protein sequence | MTESTKAALE EWRRLASKEL KGADPDSLTW HTLEGIEVKP LYTETDVKDL PHLGSLPGIE PFTRGPRATM YAGRPWTIRQ YAGFSTAEES NAFYRKALAA GQQGVSVAFD LATHRGYDSD HPRVEGDVGK AGVAIDSVED MKILFDGIPL DKVSVSMTMN GAVIPVLANF IVTGEEQGHS RAVLSGTIQN DILKEFMVRN TYIYPPEPSM RIIADIIEYT SNEMPKFNSI SISGYHMQEA GANLVQELAY TLADGREYVR AALKAGMDVD QFAGRLSFFF AIGMNFFMEA AKLRAARLLW TRIMKEFEPK KPGSLMLRTH CQTSGVSLQE QDPYNNVVRT AYEAMAAALG GTQSLHTNAL DEAIALPTEF SARIARNTQL ILQEETGITH VVDPLAGSYY VESLTAQLAE KAWALIEEVE AMGGMTKAVA SGMPKLRIEE TAARRQAQID RGEEVIVGVN KYRLAKEDPI DILDIDNMKV RDAQIARLNR IRTTRNEATC QAALAELSRR AKEGGNLLEA AVEAARARAS VGEISMAMEK EFGRHRAEVK TLAGVYGAAY EGDDDFAQIQ RDVETFAEEE GRRPRMLVVK MGQDGHDRGA KVIATAFADI GFDVDVGPLF QTPEEAAQDA IDNDVHVVGI SSQAAGHKTL APKLIAALKE QGAGDIIVIC GGVIPQQDYD FLKKAGVKAI FGPGTNIPSA ARDILSLIRA ARAA
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