Gene Ppro_0388 details

Gene Information

• Locus tag: Ppro_0388
• ID: 4573052
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter propionicus DSM 2379
• Kingdom: Bacteria
• Replicon accession: NC_008609
• Strand: +
• Start bp: 400151
• End bp: 400555
• Gene Length: 405 bp
• Protein Length: 134 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 639754427
• Product: cobalamin B12-binding domain-containing protein
• Protein accession: YP_900080
• Protein GI: 118578830
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding)
• TIGRFAM ID: [TIGR00640] methylmalonyl-CoA mutase C-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.000031654
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGAAA GAACATTGCG CGTACTTGTG GGCAAACCTG GTTTGGACGG ACATGACCGG 
GGAGCCAAGA TTGTTGCACG GGCCTTCCGT GATGCCGGCT TCGAAGTTAT CTACACCGGC 
CTGCACCAGA CTCCTGAGCA GATCGTTGCC GCCGCCATCC AGGAAGACGT TGATTGTGTC 
GGTCTGTCGA TCCTCTCCGG CGCCCACAAT ACCCTGCTCC CGCGCGTTAC GGAACTGCTG 
AAAGAGAAAG GCGCTGACGA CATCAAGGTG TTCGGCGGCG GCGTTATCCC CGAAGACGAC 
ATCCCAGGTC TCAAGGCAGC GGGCATACTG GAAGTTTTCA CTCCCGGCAC CTCCACCGAC 
GACATCGTGA AGTGGATTCG TGGCAACATT CCGCCGCGTT CCTAA 

 

Protein sequence

MAERTLRVLV GKPGLDGHDR GAKIVARAFR DAGFEVIYTG LHQTPEQIVA AAIQEDVDCV 
GLSILSGAHN TLLPRVTELL KEKGADDIKV FGGGVIPEDD IPGLKAAGIL EVFTPGTSTD 
DIVKWIRGNI PPRS