| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1760 |
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| Symbol | |
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| ID | 3972257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1911348 |
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| End bp | 1913504 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637924873 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_531638 |
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| Protein GI | 90423268 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.226069 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGA TTCCGAATTT CGCCGACGTC GCATTCCAGA GCGCCGCGGT CGCGCCGGCC
GGTGGCCACG CCGAACCCTG GCTGACGCCG GAAGGCATCT TGGTCAAGCC CGGCTATTCC
GAGGCGGACC TGAAAGGCAT CGACTTCCTC GATACCTATC CGGGCATCGC GCCGTTTTTG
CGCGGCCCCT ACCCGACCAT GTATGTCAAC CAGCCCTGGA CCATCCGGCA ATATGCCGGC
TTCTCCACCG CGGAAGATTC CAACGCGTTC TATCGCCGCA ACCTCGCCGC CGGGCAAAAG
GGCCTGTCGG TGGCGTTCGA TCTCGCCACC CACCGCGGCT ACGATAGCGA TCATCCGCGG
GTGTCTGGCG ACGTCGGCAT GGCGGGCGTG GCGATCGATA GTATCTACGA CATGCGCACG
TTGTTCGCCG GCATTCCGCT CGACCAGATG AGCGTGTCGA TGACCATGAA CGGCGCGGTG
CTGCCGATCC TGGCGCTGTT CGTCGCCGCC GCCGAGGAAC AGGGCGTGCC GCCGGAGAAA
CTCTCCGGAA CCATTCAGAA CGACATTCTG AAAGAGTTCA TGGTGCGCAA CACCTACATC
TATCCGCCGG CGCCCTCGAT GCGGATCATC TCCGACATCT TCGCCTACAC CTCGGCGAAG
ATGCCGAAGT ACAATTCCAT CTCCATCTCC GGCTATCACA TGCAGGAAGC CGGTGCCACG
CAGGACCTCG AGCTCGCTTA TACGCTCGCC GACGGCGTCG AATATCTGCG TGCCGGCATT
GCGGCGGGCC TCGACGTCGA TCGCTTTGCA CCCAGGCTGT CGTTCTTCTG GGCAATCGGC
ATGAACTTCT TCATGGAAGT CGCCAAGATG CGCGCGGCTC GGCTGTTGTG GGCCAAGCTG
TTGAAACAGT TCAACCCGCA GAATCCGAAG TCGCTGTCCT TGCGCACGCA TTGCCAGACC
TCGGGCTGGT CACTGACCGC GCAGGACGTC TACAACAACG TGATGCGCAC CACCATCGAG
GCGATGGCGG CGACGCAGGG CCACACCCAG TCGCTGCACA CCAACGCGCT CGACGAAGCG
CTGGCGCTGC CGACCGACTT CTCGGCGCGG ATCGCGCGTA ATACGCAACT GTTCCTGCAG
CAGGAGAGCG GCACCAACCG GATCATCGAT CCGTGGGGCG GCTCCTACTA CGTCGAGCGA
CTGACCCGCG ACCTCGCGGC GAAAGCCTGG GGCCACATCC AGGAGGTCGA GAGCCTCGGC
GGCATGGCCA AGGCTATCGA AGCCGGCGTG CCGAAGCTGC GGATCGAGGA AGCCTCCGCC
AAGACCCAGG CGCGGATCGA CGCCGGCCGC CAGGCGGTGA TCGGCGTCAA CAAGTACAAG
CCGGTGGATG AGGCAGCGAT CGATGTCTTG AAGGTGGATA ACTCCACCGT GCGCCGGCTG
CAGATCGACA AATTGAAGCG GCTGCGCGGC GAACGCAACC AGGCCGACGT CGACGCCGCA
CTCAATGCGC TGACGCGCTC GGCGTCGGAG GGCAACGGCA ATCTGTTGGC GCTCGCCATC
GACGCCGCGC GGGTCAAGGC CACCGTCGGC GAAATCTCCG ACGCGTTGGA AAAGGTGTTC
GGGCGGCATC GCGCCGAGAT CCGCTCGATC ACCGGGGTCT ACAAGCGGGA GGCCGCCACC
ATGTCGAACC GGGTTGAGAA GCTCAAAGCG CTGATCGATG CGTTCGAGGA CGCCGAGGGC
CGCCGCCCGC GCATCCTGGT CGCCAAGATC GGCCAGGACG GCCACGACCG CGGCCAGAAG
GTGATCGCCT CGGCGTTCGC CGACATCGGC TTCGACGTCG ACATCGGGCC GCTGTTCGCC
ACCGCCGAGG AAGCCGCCAA GCAGGCGGTG GAGAACGACG TCCACATCCT CGGCGTCTCC
TCGCTCGCCG CAGCGCATCT CACCGCGGTG CCGGAATTGA AGGCGGCGCT GAAGAAGCAG
GGCCGCGACG ACATCATGGT CATCATCGGC GGGGTGATGC CGCCGCAGGA CTACGACACG
CTGTACAAGG CGGGCGCCGA GGCGATCTTC CCGCCCGGCA CGGTGATCGC CGACGCCGCC
GAGGAACTGA TCCACAAGCT CAACGCACGG CTGGGGCACG CCGAGGCCGC GGAGTAG
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| Protein sequence | MSQIPNFADV AFQSAAVAPA GGHAEPWLTP EGILVKPGYS EADLKGIDFL DTYPGIAPFL
RGPYPTMYVN QPWTIRQYAG FSTAEDSNAF YRRNLAAGQK GLSVAFDLAT HRGYDSDHPR
VSGDVGMAGV AIDSIYDMRT LFAGIPLDQM SVSMTMNGAV LPILALFVAA AEEQGVPPEK
LSGTIQNDIL KEFMVRNTYI YPPAPSMRII SDIFAYTSAK MPKYNSISIS GYHMQEAGAT
QDLELAYTLA DGVEYLRAGI AAGLDVDRFA PRLSFFWAIG MNFFMEVAKM RAARLLWAKL
LKQFNPQNPK SLSLRTHCQT SGWSLTAQDV YNNVMRTTIE AMAATQGHTQ SLHTNALDEA
LALPTDFSAR IARNTQLFLQ QESGTNRIID PWGGSYYVER LTRDLAAKAW GHIQEVESLG
GMAKAIEAGV PKLRIEEASA KTQARIDAGR QAVIGVNKYK PVDEAAIDVL KVDNSTVRRL
QIDKLKRLRG ERNQADVDAA LNALTRSASE GNGNLLALAI DAARVKATVG EISDALEKVF
GRHRAEIRSI TGVYKREAAT MSNRVEKLKA LIDAFEDAEG RRPRILVAKI GQDGHDRGQK
VIASAFADIG FDVDIGPLFA TAEEAAKQAV ENDVHILGVS SLAAAHLTAV PELKAALKKQ
GRDDIMVIIG GVMPPQDYDT LYKAGAEAIF PPGTVIADAA EELIHKLNAR LGHAEAAE
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