| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2998 |
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| Symbol | |
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| ID | 5540494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3892054 |
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| End bp | 3892458 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640895120 |
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| Product | cobalamin B12-binding domain-containing protein |
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| Protein accession | YP_001433073 |
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| Protein GI | 156742944 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.651513 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0337584 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATCGTC CAATCCGTGT GCTCATTGCA AAGCCAGGTC TCGACGGGCA CGACCGGGGA
GCGAAAGTTA TTGCCCGCGC ATTGCGTGAT GCGGGCATGG AGGTGATCTA CACTGGCATT
CAGCAAACGC CGCAGATGAT TGTCGAGGCG GCGTTGCAGG AAGATGTCGA TGTGATTGGT
CTTTCGATCC TCTCCGGTGC GCATATGACT CTGTTGCCGC GCGTGATGGA ATTGCTGCGC
GACCACGGGA TGCACGACGT GCTGGTTGTG GCGGGTGGGA TCATTTCGGA CGACGATGCC
CGGATATTGA AAGAGCAGCA TGGCATTGCT GAGGTGTACG GACCTGGCGC TTCAACCCAC
GAGATCGTGC GTTTCATTCA GGAACGATGC GAAACGAGGA CTTGA
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| Protein sequence | MDRPIRVLIA KPGLDGHDRG AKVIARALRD AGMEVIYTGI QQTPQMIVEA ALQEDVDVIG
LSILSGAHMT LLPRVMELLR DHGMHDVLVV AGGIISDDDA RILKEQHGIA EVYGPGASTH
EIVRFIQERC ETRT
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