| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2055 |
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| Symbol | |
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| ID | 5105035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1975781 |
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| End bp | 1976248 |
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| Gene Length | 468 bp |
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| Protein Length | 155 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640507945 |
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| Product | cobalamin B12-binding domain-containing protein |
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| Protein accession | YP_001192119 |
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| Protein GI | 146304803 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCGTGAAT ATTTAAACTA TTTAAACTTG AGAGACATGA TACTACTGAT GGATAAGAGG
ATAAAAGTAG TAGTGGCTAA ACTTGGGCTG GACGGTCATG ATAGGGGAGC AAAGGTTATC
GCCAGGGCCC TTAAGGACGC AGGCATGGAG GTAGTTTACA CGGGTCTAAG GCAAACGCCC
GAACAGATAG TTAGGACCGC TATTCAGGAG GACGCTGATG TAATTGGTAT TAGTATACTA
AGCGGAGCTC ACCTAGAATT GATGCCAAAA ATAGTTGAGG CCTTGAAGAA GGCTGGCTTA
GATGATGTAG GTCTTGTGTT AGGGGGAGTT ATCCCACCGG AGGACATTCC CAAGCTGAAA
GCTATGGGGG TTGATGACGT ATTTCTGCCT GGAACAAGTT TGAAGGAGAT AGCTCAGAGA
GTTTCAAAGC TCGCCTCAAC CAAGAGAGGT ATAAAGGTTG AAGGATGA
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| Protein sequence | MREYLNYLNL RDMILLMDKR IKVVVAKLGL DGHDRGAKVI ARALKDAGME VVYTGLRQTP
EQIVRTAIQE DADVIGISIL SGAHLELMPK IVEALKKAGL DDVGLVLGGV IPPEDIPKLK
AMGVDDVFLP GTSLKEIAQR VSKLASTKRG IKVEG
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