Gene Caci_7994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7994 
Symbol 
ID8339372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9277195 
End bp9277602 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content68% 
IMG OID644961079 
Productcobalamin B12-binding domain protein 
Protein accessionYP_003118658 
Protein GI256397094 
COG category[I] Lipid transport and metabolism 
COG ID[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) 
TIGRFAM ID[TIGR00640] methylmalonyl-CoA mutase C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGT CAGCTCCGGT CCGCGTCGTC ATCGCGAAGC CCGGCCTGGA CGGCCACGAC 
CGGGGCGCGA AGGTCGTCGC GCGCGCCCTG CGCGACGCGG GCGTCGAGGT CATCTACACC
GGTCTGCACC AGATGCCCGA CCAGATCGTG GCCACCGCCA TCCAGGAGGA CGCCGACGCC
ATCGGCCTGT CGATCCTGTC CGGCGCGCAC ATGACGCAGT GCGCGAAGGT GATCGAGGTC
CTGAAGGAGA AGGACGCCTC GGACATCAAG GTCTTCGTCG GCGGCATCAT CCCCGAGGCG
GACTTCCCGG CGCTCAAGGA GATGGGTGTC GTGGCGATCT TCACCCCGGG CACCTCCACG
CAGCAGATCG TCGACTGGGT GAACGGGAAC CTCGCGCACG CTGCCTGA
 
Protein sequence
MSQSAPVRVV IAKPGLDGHD RGAKVVARAL RDAGVEVIYT GLHQMPDQIV ATAIQEDADA 
IGLSILSGAH MTQCAKVIEV LKEKDASDIK VFVGGIIPEA DFPALKEMGV VAIFTPGTST
QQIVDWVNGN LAHAA