| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3367 |
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| Symbol | |
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| ID | 3935840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3418316 |
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| End bp | 3420445 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637905740 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_511309 |
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| Protein GI | 89055858 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGAGA GCACCGACAA CTGGCGTAAG CTGGCCGAAA AGGAACTGCG GGGCCGCGAT
CTGGATGATC TGACCTGGCG CACGCTGGAA GGGATCGACG TCAAGCCGCT CTATACCGCT
GCCGATACCG ATGGGCTGGA CCATATGGGC TCCACCCCCG GGGAGGCGCC GTTCACGCGT
GGTGTGAAGG CCACGATGTA TGCAGGCCGC CCCTGGACGA TCCGCCAATA TGCGGGCTTT
TCGACGGCGG AGGAGTCGAA CGCCTTCTAC CGCAAGGCGT TGGAGGCGGG CCAGCAGGGT
GTTTCAGTCG CCTTCGATCT GGCCACGCAT CGCGGTTATG ACAGCGATCA CGCCCGCGTG
GTGGGTGATG TCGGCAAGGC GGGTGTCGCG ATTGACTCGG TTGAGGACAT GAAAATCCTC
TTCGACGGCA TCCCGTTAGA TAAAATTTCT GTTTCAATGA CCATGAATGG CGCGGTCATT
CCCGTTTTGG CGTCGTTTGT CGTGGCCGGT GAGGAGCAGG GGCATGACAA GGCGCTGCTG
TCTGGAACGA TCCAGAACGA CATCCTGAAG GAGTTCATGG TCCGCAACAC CTACATCTAT
CCGCCGGAAC CGTCAATGCG GATCATTTCG GATATCATTG CCTACACCTC TGATAACATG
CCGAAATTCA ACTCCATCTC GATCTCCGGC TATCATATGC AGGAGGCGGG CGCGAACCTG
GTGCAGGAAC TCGCCTACAC CATTGCGGAC GGCCGTGAAT ACGTGCGCGC CGCGATTGAG
GCCGGCATGG ATGTCGACAA ATTCGCAGGC CGCCTGTCGT TCTTCTTCGC CATCGGCATG
AATTTCTTCA TGGAGGCGGC CAAGCTGCGC GCCGCCCGCA CCATGTGGCA CAGGGTCATG
ACCGAGATGG GCGCGCAATC GGACCGGTCC AAAATGCTGC GCACCCACTG CCAGACGTCG
GGCGTGTCCT TGCAGGAACA GGACCCCTAC AACAATGTCG TGCGCACCGC CTATGAGGCG
ATGAGCGCGG TTCTGGGCGG CACGCAATCG CTGCACACCA ATTCGTTTGA CGAGGCCATC
GCGCTGCCCA CCGATTTCTC GTCCCGTATC GCACGCAATA CGCAATTGAT TCTGCAAGAA
GAAACCGGGG TGACGAATGT CGTCGATCCG TTGGCGGGAT CATACTACGT GGAGGCGCTG
ACGGCGGAGT TGATCGAGAA GGCCACTACC CTGATGGATG AGGTGGAAGA GATGGGCGGC
ATGACCAAGG CCGTCGCTTC TGGCTTGCCA AAGCTGAGGA TCGAAGAATC CGCCGCCCGC
CGTCAGGCCA TGATCGACCG CGGGGAAGAG GTGATTGTCG GCGTCAACAA ATACCGCAAG
GACGCCGAGG ACCCGATCGA CATTCGCGAT ATCGACAACG ATGCAGTGCG CGACGCGCAG
ATCGCCCGGC TAACGCAAAT TCGGAGCAGC CGCGAGGACA GCGTCTGCGC AGCAGCGCTG
GAGGAGCTGA CGCGCACCGC CCGGGAGGGC GGGAACCTTC TGGCCGCCGC CGTCGAAGCG
GCCCGCGCCC GTGCCACCGT AGGAGAGATC AGCATGGCAA TGGAACACAC GTTTGGCCGC
CACCGGGCTG AGGTCAAAAC CCTCGCAGGC GTCTACGGCT CAGCCTATGA AGGCGACGAG
GATTTTGCCG CCATTCAGGA AGATGTCGAA AAATTCGCCG AAGCCGAAGG CCGCCGCCCC
CGCATGTTGG TCGTGAAAAT GGGCCAGGAC GGTCACGACC GGGGTGCGAA GGTCATCGCG
ACGGCCTTCG CCGATATCGG TTTTGATGTC GATGTCGGCC CGCTGTTCCA GACGCCGGAA
GAGGCCGCGC AAGACGCCAT CGACAACGAC GTCCATGTCA TTGGCATCTC GTCCCAGGCG
GCGGGCCACA AGACGCTCGC CCCGAAACTC ATCGCCGCGC TCAAGGCGGA AGGGGCCGGT
GAGATCATCG TCATTTGTGG CGGTGTCATC CCGCAACAGG ACTATGACTT CCTAACAAAG
GCGGGCGTCG CTGCAATCTT CGGTCCCGGC ACGCATATTC CGTCAGCCGC CAAAGATATT
CTTCGTCTGA TCGGCGAGGC GCGTGGGTAG
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| Protein sequence | MTESTDNWRK LAEKELRGRD LDDLTWRTLE GIDVKPLYTA ADTDGLDHMG STPGEAPFTR
GVKATMYAGR PWTIRQYAGF STAEESNAFY RKALEAGQQG VSVAFDLATH RGYDSDHARV
VGDVGKAGVA IDSVEDMKIL FDGIPLDKIS VSMTMNGAVI PVLASFVVAG EEQGHDKALL
SGTIQNDILK EFMVRNTYIY PPEPSMRIIS DIIAYTSDNM PKFNSISISG YHMQEAGANL
VQELAYTIAD GREYVRAAIE AGMDVDKFAG RLSFFFAIGM NFFMEAAKLR AARTMWHRVM
TEMGAQSDRS KMLRTHCQTS GVSLQEQDPY NNVVRTAYEA MSAVLGGTQS LHTNSFDEAI
ALPTDFSSRI ARNTQLILQE ETGVTNVVDP LAGSYYVEAL TAELIEKATT LMDEVEEMGG
MTKAVASGLP KLRIEESAAR RQAMIDRGEE VIVGVNKYRK DAEDPIDIRD IDNDAVRDAQ
IARLTQIRSS REDSVCAAAL EELTRTAREG GNLLAAAVEA ARARATVGEI SMAMEHTFGR
HRAEVKTLAG VYGSAYEGDE DFAAIQEDVE KFAEAEGRRP RMLVVKMGQD GHDRGAKVIA
TAFADIGFDV DVGPLFQTPE EAAQDAIDND VHVIGISSQA AGHKTLAPKL IAALKAEGAG
EIIVICGGVI PQQDYDFLTK AGVAAIFGPG THIPSAAKDI LRLIGEARG
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