Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0726 |
Symbol | bhbA |
ID | 5711161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 733404 |
End bp | 735542 |
Gene Length | 2139 bp |
Protein Length | 712 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641266634 |
Product | methylmalonyl-CoA mutase |
Protein accession | YP_001532072 |
Protein GI | 159043278 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit [COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.999011 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAAAG GCAAAGACGC GTGGGCTGAC CTCGCCGCCA AGGAGTTGCG CGGCAAGCCG TTGGAGACGT TGACCTGGAA GACGCTGGAG GGGATCGACG TCAAACCCCT CTATACCGCC GAGGACCTGG AGGGGCTCGA CCATCTGGGA TCGGTCCCCG GTCAGGCGCC CTTCACGCGC GGGGTGAAGG CCACGATGTA TGCGGGCCGC CCCTGGACGA TCCGGCAATA TGCGGGCTTC TCCACCGCCG AGGAGAGCAA CGCGTTCTAC CGCAAGGCCC TTGCCGCCGG GCAGCAGGGC GTGTCGGTGG CGTTCGATCT GGCCACCCAC CGCGGCTATG ACAGCGACCA TCCCCGGGTG GAGGGCGATG TGGGCAAGGC CGGCGTGGCC ATCGACAGTG TCGAGGACAT GAAGATCCTG TTCGACGGCA TCCCGCTCGA TCAGGTGTCG GTCTCGATGA CCATGAACGG CGCCGTGATC CCGATCCTCG CGAATTTCAT CGTCACCGGC GAAGAGCAGG GCCATGACCG GTCTGTCCTG TCGGGCACGA TCCAGAACGA CATCCTCAAG GAATTCATGG TCCGCAACAC CTATGTCTAT CCGCCTGAGC CCTCGATGCG GATCATCGCG GACATCATCG AATACACCTC CGCCGAGATG CCGAAATTCA ACTCGATCTC GATCTCCGGC TACCACATGC AGGAGGCGGG CGCGAACCTG GTGCAGGAGC TGGCCTTCAC CCTGGCGGAC GGGCGCGAAT ATGTCCGCGC CGCCATCGCG CGCGGCATGG ACGTGGACAA GTTCGCAGGC AGGCTCAGCT TCTTCTTCGC CATCGGCATG AACTTCTTCA TGGAAGCCGC CAAGCTGCGC GCGGCGCGGA TGCTGTGGCA CAAGATCATG TCCGAGTTCG AGCCGAAGAA CCCGCGCTCC ATGATGCTGC GCACCCATTG CCAGACGAGC GGTGTCTCCT TGCAGGAGCA AGACCCCTAC AACAACGTGA TCCGCACCGC TTACGAGGCG ATGAGCGCGG TTCTGGGCGG GACGCAATCG CTGCATACCA ACGCGCTGGA CGAGGCGATT GCCCTGCCGA CGGAATTCTC GGCGCGCATC GCCCGGAACA CCCAGCTGAT CCTGCAGGAG GAGACCGGCG TGACCAACGT GGTCGATCCG CTGGCGGGCT CTTACTACGT CGAAAGCCTG ACCAACGAGC TGGCCGAAAA GGCCTGGGCC TTGATCGAGG AGGTCGAGGA ACTGGGCGGC ATGACCAAGG CCGTGGCCTC TGGCATGCCC AAGCTGCGGA TCGAGGAGTC CGCGGCCCGA CGCCAGGCGA TGATCGACAA GGGCACGGAA GTGATCGTGG GGGTCAACAA GTACCGCAAG GACAAGGAAG ACCCGATCGA CATCCTGGAG ATCGACAATG CCAAGGTGCG CGACGGGCAG GTGGCCCGGC TCGCGAAGAT CCGCGCGGAG CGGGACGAGG CGGCCTGCGA CTCGGCCCTG GCCGAGGTGG AGCGGTGCGC GGCTGAGGGG GGCAACCTTC TGGCCGCGGC GGTGGAAGCG GCTCGCGCGC GGGCCAGTGT GGGAGAAATC AGCATGGCCA TGGAAAAGGT GTTCGGACGC CACCGGGCAG AGGTGAAGAC GCTCGCGGGT GTCTATGGCG CGGCCTACGA GGGCGATGAC GGGTTCGCCG CCATCCAGAA ATCGGTGGAG GATTTCGCCG CCGAGGAAGG GCGCAGGCCC CGGATGCTCG TGGTCAAGAT GGGCCAGGAC GGCCATGACC GGGGCGCCAA GGTGATCGCC ACCGCCTTTG CCGATATCGG GTTCGACGTG GATGTGGGGC CGCTCTTCCA GACCCCGGAA GAGGCCGCGC AGGACGCTAT CGACAACGAT GTGCACGTCA TCGGCATCTC CAGCCAGGCC GCCGGTCACA AGACCCTTGC CCCCAAGCTG GTCGATGCGC TGAAGGCCCA GGGCGCGGGG GATATCCTGG TGATTTGCGG CGGGGTGATC CCGCAGCAGG ACTACCAGTA CCTCTATGAC CGCGGGGTGA AGGCGATCTT CGGGCCGGGT ACGAACATCC CCGAGGCGGC CCAGGACATC CTGCGCCTGA TCCGGGAATC CCGGGCCGAA GCGGCCTGA
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Protein sequence | MTKGKDAWAD LAAKELRGKP LETLTWKTLE GIDVKPLYTA EDLEGLDHLG SVPGQAPFTR GVKATMYAGR PWTIRQYAGF STAEESNAFY RKALAAGQQG VSVAFDLATH RGYDSDHPRV EGDVGKAGVA IDSVEDMKIL FDGIPLDQVS VSMTMNGAVI PILANFIVTG EEQGHDRSVL SGTIQNDILK EFMVRNTYVY PPEPSMRIIA DIIEYTSAEM PKFNSISISG YHMQEAGANL VQELAFTLAD GREYVRAAIA RGMDVDKFAG RLSFFFAIGM NFFMEAAKLR AARMLWHKIM SEFEPKNPRS MMLRTHCQTS GVSLQEQDPY NNVIRTAYEA MSAVLGGTQS LHTNALDEAI ALPTEFSARI ARNTQLILQE ETGVTNVVDP LAGSYYVESL TNELAEKAWA LIEEVEELGG MTKAVASGMP KLRIEESAAR RQAMIDKGTE VIVGVNKYRK DKEDPIDILE IDNAKVRDGQ VARLAKIRAE RDEAACDSAL AEVERCAAEG GNLLAAAVEA ARARASVGEI SMAMEKVFGR HRAEVKTLAG VYGAAYEGDD GFAAIQKSVE DFAAEEGRRP RMLVVKMGQD GHDRGAKVIA TAFADIGFDV DVGPLFQTPE EAAQDAIDND VHVIGISSQA AGHKTLAPKL VDALKAQGAG DILVICGGVI PQQDYQYLYD RGVKAIFGPG TNIPEAAQDI LRLIRESRAE AA
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