More than 300 homologs were found in PanDaTox collection
for query gene Caul_0836 on replicon NC_010338
Organism: Caulobacter sp. K31



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009952  Dshi_2855  methylmalonyl-CoA mutase  67.08 
 
 		 657 aa  875    Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_0334  methylmalonyl-CoA mutase, large subunit  64.92 
 
 		 688 aa  847    Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_4193  methylmalonyl-CoA mutase, large subunit  63.94 
 
 		 670 aa  803    Conexibacter woesei DSM 14684  Bacteria  normal  0.669168  normal  0.90036 
 
 
-
 
NC_007493  RSP_0961  methylmalonyl-CoA mutase  68.15 
 
 		 652 aa  860    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009720  Xaut_1197  methylmalonyl-CoA mutase, large subunit  67.02 
 
 		 657 aa  873    Xanthobacter autotrophicus Py2  Bacteria  normal  0.282186  normal  1 
 
 
-
 
NC_007643  Rru_A3062  methylmalonyl-CoA mutase  68.65 
 
 		 671 aa  915    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_010172  Mext_0290  methylmalonyl-CoA mutase, large subunit  64.77 
 
 		 688 aa  847    Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.515512 
 
 
-
 
NC_007777  Francci3_2169  methylmalonyl-CoA mutase  60.5 
 
 		 692 aa  798    Frankia sp. CcI3  Bacteria  normal  0.485789  normal  0.751366 
 
 
-
 
NC_007802  Jann_0797  methylmalonyl-CoA mutase  67.89 
 
 		 654 aa  891    Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013124  Afer_0223  methylmalonyl-CoA mutase, large subunit  55.16 
 
 		 647 aa  671    Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.784456  n/a   
 
 
-
 
NC_010725  Mpop_0366  methylmalonyl-CoA mutase, large subunit  64.31 
 
 		 688 aa  843    Methylobacterium populi BJ001  Bacteria  normal  0.560359  normal  1 
 
 
-
 
NC_011894  Mnod_0038  methylmalonyl-CoA mutase, large subunit  64.71 
 
 		 690 aa  838    Methylobacterium nodulans ORS 2060  Bacteria  normal  0.579469  n/a   
 
 
-
 
NC_009719  Plav_1625  methylmalonyl-CoA mutase, large subunit  68.62 
 
 		 667 aa  887    Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008043  TM1040_3106  methylmalonyl-CoA mutase  66.82 
 
 		 661 aa  896    Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_0036  methylmalonyl-CoA mutase, large subunit  64.93 
 
 		 675 aa  837    Methylobacterium sp. 4-46  Bacteria  normal  0.0637775  decreased coverage  0.00272797 
 
 
-
 
NC_008687  Pden_3875  methylmalonyl-CoA mutase, large subunit  69.15 
 
 		 688 aa  884    Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_1106  methylmalonyl-CoA mutase, large subunit  64.38 
 
 		 680 aa  838    Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_1772  methylmalonyl-CoA mutase  63.29 
 
 		 680 aa  821    Nocardioides sp. JS614  Bacteria  normal  0.292142  n/a   
 
 
-
 
NC_009921  Franean1_1034  methylmalonyl-CoA mutase, large subunit  63 
 
 		 666 aa  820    Frankia sp. EAN1pec  Bacteria  normal  0.488774  normal  0.762762 
 
 
-
 
NC_009953  Sare_4003  methylmalonyl-CoA mutase, large subunit  60.83 
 
 		 685 aa  741    Salinispora arenicola CNS-205  Bacteria  normal  0.446619  hitchhiker  0.000372138 
 
 
-
 
NC_013757  Gobs_4128  methylmalonyl-CoA mutase, large subunit  64.36 
 
 		 667 aa  809    Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_010338  Caul_0836  methylmalonyl-CoA mutase, large subunit  100 
 
 		 662 aa  1353    Caulobacter sp. K31  Bacteria  normal  0.733808  normal  0.66979 
 
 
-
 
NC_009049  Rsph17029_2621  methylmalonyl-CoA mutase, large subunit  68 
 
 		 652 aa  858    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009380  Strop_3621  methylmalonyl-CoA mutase, large subunit  60.28 
 
 		 668 aa  746    Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_1226  methylmalonyl-CoA mutase, large subunit  64.21 
 
 		 672 aa  836    Catenulispora acidiphila DSM 44928  Bacteria  normal  0.6728  normal  0.0673448 
 
 
-
 
NC_009428  Rsph17025_3008  methylmalonyl-CoA mutase, large subunit  68.62 
 
 		 652 aa  869    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.842553  normal  0.248307 
 
 
-
 
NC_013522  Taci_0288  methylmalonyl-CoA mutase, large subunit  46.58 
 
 		 559 aa  427  1e-118  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_009943  Dole_0079  methylmalonyl-CoA mutase  37.85 
 
 		 706 aa  414  1e-114  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.373309  n/a   
 
 
-
 
NC_007794  Saro_0811  methylmalonyl-CoA mutase  38.64 
 
 		 714 aa  406  1.0000000000000001e-112  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.251875  n/a   
 
 
-
 
NC_008025  Dgeo_1320  methylmalonyl-CoA mutase  38.64 
 
 		 722 aa  406  1.0000000000000001e-112  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010320  Teth514_1855  methylmalonyl-CoA mutase, large subunit  44.74 
 
 		 560 aa  400  9.999999999999999e-111  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_009616  Tmel_1860  methylmalonyl-CoA mutase, large subunit  44.61 
 
 		 559 aa  399  9.999999999999999e-111  Thermosipho melanesiensis BI429  Bacteria  decreased coverage  0.0000937746  n/a   
 
 
-
 
NC_011992  Dtpsy_1849  methylmalonyl-CoA mutase  36.63 
 
 		 720 aa  395  1e-109  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_009719  Plav_1702  methylmalonyl-CoA mutase  37.46 
 
 		 718 aa  399  1e-109  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  0.0321557 
 
 
-
 
NC_009049  Rsph17029_0867  methylmalonyl-CoA mutase  38.67 
 
 		 709 aa  398  1e-109  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.134958  normal  1 
 
 
-
 
NC_007493  RSP_2192  methylmalonyl-CoA mutase  38.35 
 
 		 709 aa  395  1e-108  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.172259  n/a   
 
 
-
 
NC_007802  Jann_3367  methylmalonyl-CoA mutase  36.87 
 
 		 709 aa  393  1e-108  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009952  Dshi_0726  methylmalonyl-CoA mutase  36.77 
 
 		 712 aa  394  1e-108  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.999011  normal  1 
 
 
-
 
NC_010831  Cphamn1_1173  methylmalonyl-CoA mutase, large subunit  36 
 
 		 1106 aa  394  1e-108  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  decreased coverage  0.00593374 
 
 
-
 
NC_008752  Aave_2510  methylmalonyl-CoA mutase  36.94 
 
 		 722 aa  393  1e-108  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  0.178476 
 
 
-
 
NC_007514  Cag_1223  methylmalonyl-CoA mutase  36.81 
 
 		 712 aa  390  1e-107  Chlorobium chlorochromatii CaD3  Bacteria  normal  1  n/a   
 
 
-
 
NC_012791  Vapar_2127  methylmalonyl-CoA mutase  37.81 
 
 		 720 aa  390  1e-107  Variovorax paradoxus S110  Bacteria  normal  0.063815  n/a   
 
 
-
 
NC_013440  Hoch_3688  methylmalonyl-CoA mutase, large subunit  44.24 
 
 		 537 aa  390  1e-107  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.0115893 
 
 
-
 
NC_010803  Clim_0868  methylmalonyl-CoA mutase  36.81 
 
 		 715 aa  390  1e-107  Chlorobium limicola DSM 245  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_2805  methylmalonyl-CoA mutase  36.48 
 
 		 719 aa  391  1e-107  Rhodoferax ferrireducens T118  Bacteria  normal  0.147831  n/a   
 
 
-
 
NC_009718  Fnod_1752  methylmalonyl-CoA mutase, large subunit  44.4 
 
 		 554 aa  391  1e-107  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008048  Sala_1221  methylmalonyl-CoA mutase  38.71 
 
 		 715 aa  390  1e-107  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.584735  normal  1 
 
 
-
 
NC_010718  Nther_1486  methylmalonyl-CoA mutase  43.03 
 
 		 559 aa  391  1e-107  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  0.220657 
 
 
-
 
NC_008781  Pnap_2383  methylmalonyl-CoA mutase  37.44 
 
 		 718 aa  391  1e-107  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008782  Ajs_2040  methylmalonyl-CoA mutase  36.32 
 
 		 720 aa  392  1e-107  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008786  Veis_3398  methylmalonyl-CoA mutase  36.57 
 
 		 731 aa  392  1e-107  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.526303  normal  1 
 
 
-
 
NC_009511  Swit_2891  methylmalonyl-CoA mutase  36.75 
 
 		 716 aa  386  1e-106  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  0.17991 
 
 
-
 
NC_009523  RoseRS_0545  methylmalonyl-CoA mutase  38.17 
 
 		 740 aa  387  1e-106  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011059  Paes_0875  methylmalonyl-CoA mutase, large subunit  36.17 
 
 		 1081 aa  388  1e-106  Prosthecochloris aestuarii DSM 271  Bacteria  normal  1  normal  0.036821 
 
 
-
 
NC_007512  Plut_1292  methylmalonyl-CoA mutase  35.91 
 
 		 714 aa  389  1e-106  Chlorobium luteolum DSM 273  Bacteria  normal  1  normal  0.816153 
 
 
-
 
NC_013411  GYMC61_0279  methylmalonyl-CoA mutase  37.85 
 
 		 731 aa  387  1e-106  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008639  Cpha266_1164  methylmalonyl-CoA mutase  36.42 
 
 		 713 aa  386  1e-106  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.197015  n/a   
 
 
-
 
NC_008825  Mpe_A1014  methylmalonyl-CoA mutase  37.56 
 
 		 719 aa  387  1e-106  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  0.856859 
 
 
-
 
NC_010571  Oter_3304  methylmalonyl-CoA mutase, large subunit  38.12 
 
 		 719 aa  387  1e-106  Opitutus terrae PB90-1  Bacteria  decreased coverage  0.00679496  normal  0.683271 
 
 
-
 
CP001509  ECD_02748  methylmalonyl-CoA mutase  37.57 
 
 		 714 aa  383  1e-105  Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
NC_011353  ECH74115_4213  methylmalonyl-CoA mutase  37.72 
 
 		 714 aa  385  1e-105  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_3872  methylmalonyl-CoA mutase  37.7 
 
 		 740 aa  385  1e-105  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.231489  normal  0.125312 
 
 
-
 
NC_013037  Dfer_5804  methylmalonyl-CoA mutase  35.36 
 
 		 972 aa  383  1e-105  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.256305  normal  0.17905 
 
 
-
 
NC_010468  EcolC_0793  methylmalonyl-CoA mutase  37.57 
 
 		 714 aa  383  1e-105  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011060  Ppha_1167  methylmalonyl-CoA mutase  36.38 
 
 		 712 aa  383  1e-105  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.169366  n/a   
 
 
-
 
NC_012892  B21_02711  hypothetical protein  37.57 
 
 		 714 aa  383  1e-105  Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
-
 
NC_008687  Pden_3681  methylmalonyl-CoA mutase  36.27 
 
 		 714 aa  382  1e-105  Paracoccus denitrificans PD1222  Bacteria  normal  0.542374  normal  1 
 
 
-
 
NC_009801  EcE24377A_3244  methylmalonyl-CoA mutase  37.57 
 
 		 714 aa  382  1e-105  Escherichia coli E24377A  Bacteria  normal  0.98625  n/a   
 
 
-
 
NC_010002  Daci_3753  methylmalonyl-CoA mutase  36.34 
 
 		 738 aa  383  1e-105  Delftia acidovorans SPH-1  Bacteria  normal  0.801598  normal  0.879758 
 
 
-
 
NC_009800  EcHS_A3075  methylmalonyl-CoA mutase  37.72 
 
 		 714 aa  385  1e-105  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
CP001637  EcDH1_0776  methylmalonyl-CoA mutase, large subunit  37.43 
 
 		 714 aa  381  1e-104  Escherichia coli DH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_012793  GWCH70_2294  methylmalonyl-CoA mutase  37.54 
 
 		 731 aa  382  1e-104  Geobacillus sp. WCH70  Bacteria  normal  0.895743  n/a   
 
 
-
 
NC_014165  Tbis_1920  methylmalonyl-CoA mutase large subunit  36.45 
 
 		 720 aa  381  1e-104  Thermobispora bispora DSM 43833  Bacteria  normal  0.0552222  normal  0.617547 
 
 
-
 
NC_007948  Bpro_2161  methylmalonyl-CoA mutase  37.19 
 
 		 723 aa  382  1e-104  Polaromonas sp. JS666  Bacteria  normal  0.385791  normal  0.481947 
 
 
-
 
NC_009953  Sare_0776  methylmalonyl-CoA mutase, large subunit  43.39 
 
 		 527 aa  380  1e-104  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.140535 
 
 
-
 
NC_008254  Meso_0856  methylmalonyl-CoA mutase  36 
 
 		 714 aa  382  1e-104  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_3260  methylmalonyl-CoA mutase, large subunit  36.67 
 
 		 713 aa  380  1e-104  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_6640  methylmalonyl-CoA mutase, large subunit  36.21 
 
 		 724 aa  379  1e-104  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.70273 
 
 
-
 
NC_010498  EcSMS35_3053  methylmalonyl-CoA mutase  37.57 
 
 		 714 aa  382  1e-104  Escherichia coli SMS-3-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009428  Rsph17025_2300  methylmalonyl-CoA mutase  38.15 
 
 		 709 aa  382  1e-104  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009485  BBta_3021  methylmalonyl-CoA mutase  37.08 
 
 		 718 aa  378  1e-103  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.954275 
 
 
-
 
NC_009565  TBFG_11523  methylmalonyl-CoA mutase  37.16 
 
 		 750 aa  376  1e-103  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  0.26728 
 
 
-
 
NC_007298  Daro_4006  methylmalonyl-CoA mutase  35.85 
 
 		 716 aa  378  1e-103  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009483  Gura_0654  methylmalonyl-CoA mutase, large subunit  42.56 
 
 		 551 aa  377  1e-103  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000145738  n/a   
 
 
-
 
NC_007778  RPB_3538  methylmalonyl-CoA mutase  37.56 
 
 		 736 aa  377  1e-103  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.162308  normal  0.256268 
 
 
-
 
NC_008009  Acid345_1023  methylmalonyl-CoA mutase  42.44 
 
 		 542 aa  377  1e-103  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.85938 
 
 
-
 
NC_008044  TM1040_1865  methylmalonyl-CoA mutase  36.46 
 
 		 661 aa  376  1e-103  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008148  Rxyl_1283  methylmalonyl-CoA mutase  42.89 
 
 		 531 aa  377  1e-103  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013124  Afer_0726  methylmalonyl-CoA mutase, large subunit  42.83 
 
 		 526 aa  376  1e-103  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_0270  methylmalonyl-CoA mutase, large subunit  47.11 
 
 		 549 aa  377  1e-103  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_014230  CA2559_07125  methylmalonyl-CoA mutase  35.92 
 
 		 707 aa  377  1e-103  Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_0281  methylmalonyl-CoA mutase, large subunit  46.9 
 
 		 549 aa  376  1e-103  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  decreased coverage  0.0034305  n/a   
 
 
-
 
NC_009380  Strop_0832  methylmalonyl-CoA mutase, large subunit  43.39 
 
 		 547 aa  377  1e-103  Salinispora tropica CNB-440  Bacteria  normal  0.682429  normal  0.0142114 
 
 
-
 
NC_013525  Tter_1622  methylmalonyl-CoA mutase, large subunit  44.17 
 
 		 521 aa  374  1e-102  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009667  Oant_2001  methylmalonyl-CoA mutase  35.34 
 
 		 714 aa  375  1e-102  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_013169  Ksed_22170  methylmalonyl-CoA mutase  37.12 
 
 		 754 aa  374  1e-102  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.366718  normal  0.398515 
 
 
-
 
NC_011371  Rleg2_6511  methylmalonyl-CoA mutase  37.54 
 
 		 712 aa  375  1e-102  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009483  Gura_3481  methylmalonyl-CoA mutase, large subunit  42.15 
 
 		 551 aa  375  1e-102  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010524  Lcho_2697  methylmalonyl-CoA mutase  37.35 
 
 		 720 aa  375  1e-102  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.20812 
 
 
-
 
NC_009338  Mflv_3649  methylmalonyl-CoA mutase  36.61 
 
 		 752 aa  373  1e-102  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  0.808365 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>