| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_4006 |
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| Symbol | |
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| ID | 3567217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 4305224 |
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| End bp | 4307374 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637682479 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_287203 |
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| Protein GI | 71909616 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAA AGTTCTTTGA TTCCAATAAC CTGGATGCCT GGGAAAAGGC AGCCGCCAAG
CAATCTCCCG GCGGTGACGT CAATAACCTG GTCTGGAACA CACCCGAAGG TCTGGCCGTC
AAAGCCTTGT ACACCAAGGC CGATGTTGCA GACCTTGAGT TCGCCGACAC CCTGCCCGGC
TTCGCGCCCT ATTTGCGCGG CCCGCAACCG ACCATGTATG CAGTCAAGCC GTGGACCATC
CGCCAGTACG CCGGTTTCTC CACTGCCGAG GCTTCCAATG CTTTCTACCG CAAGGCGCTG
GCCGCCGGCG GTCAGGGCGT TTCGGTGGCT TTCGACCTGG CGACGCACCG TGGTTACGAC
TCGGACAACG CCCGCGTCAC TGGTGACGTC GGCAAGGCTG GCGTGGCGAT CGACTCGGTC
GAGGACATGA AGATTCTCTT TGACAGCATC CCGCTCGACA AGATTTCCGT CTCGATGACC
ATGAACGGCG CTGTGCTGCC GATCCTCGCC GGCTACATCG TTGCTGCCGA AGAACAGGGC
GTGTCGCAGG ACAAGCTGTC CGGCACCATC CAGAACGACA TCCTCAAAGA ATTCATGGTG
CGGAACACCT ATATCTATCC GCCCAAGCCG TCGATGAAGA TCATCGCCGA CATTTTCGGC
TATACCGCGC AGCACATGCC GAAGTTCAAC TCGATCTCGA TTTCCGGTTA TCACATCCAG
GAAGCCGGCG CCAACCAGGC CATCGAGCTG GCCTTCACGC TGGCCGACGG CATGGAATAC
GTGCGTACCG GCGTCGCTTC CGGCATGGAC GTCGACACCT TCGCTGGCCG TCTGTCCTTC
TTCTGGGCCG TCGGCATGAA CTTCTACCTG GAAATCGCCA AGATGCGCGC CGGCCGCCTG
TTGTGGGACC GCATCATGAC CGGTTTCAAT GCCAAGAGCC CGAAGTCCAA GATGCTGCGC
ACGCACAGCC AGACCTCCGG CTGGTCGCTG ACCGAGCAGG ACCCGTACAA CAACGTCGTG
CGTACCACGA TCGAAGCGAT GGCGGCCGTC TTCGGCGGCA CCCAGTCGCT GCACACCAAT
GCGCTCGACG AAGCCATTGC GCTGCCAACC GAGTTCTCGT CGCGCATCGC CCGCAACACG
CAGCTGATCA TCCAGGAAGA AACCCACATC ACCAATGTCG TCGATCCGTG GGCCGGCTCC
TACATGATGG AAAAGCTGAC CCAGGACATG GCTGACAAGG CCTGGGGCAT CATTCAGGAA
ATCGAGGCGA TGGGCGGCAT GACCAAGGCC GTCGAGTCCG GCTGGGCCAA GATGCAGGTC
GAAACCTGCG CCGCCGACAA GCAGGCGCGC ATCGACTCCG GCAAGGACGT CATCGTCGGC
GTCAACAAGT ACAAGCTGGC CAAGGAAGAC GCGATCGACA TTCTCGATAT CGACAACCAT
GCCGTGCGTG ATTCGCAGGT TGCCCGCCTC AAGCAGATTC GTGCCACCCG CGACACCGCT
GCGGTCAACG CAGCTCTGGA GGCCTTGACC AAGGCAGCCG AGACCGGCGA AGGCAACCTG
CTCGACCTGA CTGTCAAGGC CATGCGTCTG CGTGCCACGG TCGGTGAAGT ATCCGATGCG
CTGGAAAAAA TCTTCGGTCG TTTCCGCGCC AACAACCAGA CCATTTCGGG TGTTTACGGA
GGTGTCGTGG AGGGTCAGGA AAGCTGGGAA TCGATCAAGG CCGATATCGC CAAGTTCGCT
GAAGAAGAAG GTCGTCGTCC GCGCATCATG ATCGCCAAGC TCGGTCAGGA CGGTCATGAC
CGCGGCGCCA AGGTGGTGGC CACCGCTTTC GCCGACCTCG GTTTCGACAT CGACATGGGC
CCGCTGTTCC AGACCCCGGA AGAGGCAGCC CGTCAGGCCG TTGAAAACGA CGTCCACGCG
ATTGGCGTTT CGTCGCTGGC CGCTGGTCAC AAGACGCTGT TGCCGGAACT GGTCAAGTCG
CTCAAGGCGC AAGGTGCCGA TGACATCATC GTCTTCGCCG GCGGTGTGAT TCCGGCCCAG
GATTACGACT ACCTCTATAA CGCAGGTGCC AAGGCCATCT TTGGCCCGGG CACGCGGATC
GAGGATTCGG CCAAGCGCGT GATGGAAGAA ATCCGTAAGG CGCGCGGCTG A
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| Protein sequence | MSEKFFDSNN LDAWEKAAAK QSPGGDVNNL VWNTPEGLAV KALYTKADVA DLEFADTLPG
FAPYLRGPQP TMYAVKPWTI RQYAGFSTAE ASNAFYRKAL AAGGQGVSVA FDLATHRGYD
SDNARVTGDV GKAGVAIDSV EDMKILFDSI PLDKISVSMT MNGAVLPILA GYIVAAEEQG
VSQDKLSGTI QNDILKEFMV RNTYIYPPKP SMKIIADIFG YTAQHMPKFN SISISGYHIQ
EAGANQAIEL AFTLADGMEY VRTGVASGMD VDTFAGRLSF FWAVGMNFYL EIAKMRAGRL
LWDRIMTGFN AKSPKSKMLR THSQTSGWSL TEQDPYNNVV RTTIEAMAAV FGGTQSLHTN
ALDEAIALPT EFSSRIARNT QLIIQEETHI TNVVDPWAGS YMMEKLTQDM ADKAWGIIQE
IEAMGGMTKA VESGWAKMQV ETCAADKQAR IDSGKDVIVG VNKYKLAKED AIDILDIDNH
AVRDSQVARL KQIRATRDTA AVNAALEALT KAAETGEGNL LDLTVKAMRL RATVGEVSDA
LEKIFGRFRA NNQTISGVYG GVVEGQESWE SIKADIAKFA EEEGRRPRIM IAKLGQDGHD
RGAKVVATAF ADLGFDIDMG PLFQTPEEAA RQAVENDVHA IGVSSLAAGH KTLLPELVKS
LKAQGADDII VFAGGVIPAQ DYDYLYNAGA KAIFGPGTRI EDSAKRVMEE IRKARG
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