| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0545 |
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| Symbol | |
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| ID | 5207483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 681093 |
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| End bp | 683315 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640594164 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_001274917 |
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| Protein GI | 148654712 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAACCC CGGATTTTAC GACGCTTCCC TACCGTGACG GCGCTGCTGC ACCGGATCGT
GAGCAGTGGC GCGAACGCGC CGAACGTGAG GCGGGACGAC CGCTTGACAC GCTCGTCTGG
CGCACGATGG AACAACTCGA TATTCGTCCG CTCTACACGG CGGAAGATAT TGCGGGTCTT
GAGCATTTGC GCTTTACCGC TGGCATTCCG CCTTACCTGC GCGGTCCGTA TCCGACCATG
TATGTAACCC AACCCTGGAC GATCCGCCAG TACGCCGGCT TCTCGACGGC GGAAGCCAGC
AATGCGTTCT ACCGGCGCAA CCTGGCGGCA GGGCAGAAAG GGTTGTCGGT TGCGTTCGAT
CTGGCGACCC ACCGCGGCTA CGACTCTGAC CATCCCCGCG TCGTTGGCGA CGTGGGCAAG
GCGGGGGTAG CGATCGACTC GGTGCTCGAT ATGAAAATCC TGTTCGACGG CATCCCGCTC
GATCAGATGT CGGTGTCGAT GACGATGAAC GGCGCCGTCA TCCCGATCAT GGCGTTCTAC
ATCGTCGCTG CCGAAGAACA GGGGGTGCGC CAGGATCAGT TGACCGGCAC GATCCAGAAC
GATATTCTCA AAGAGTACAT GGTGCGCAAC ACGTACATTT ACCCGCCTGA ACCGTCGATG
CGCATCATTG CTGATATTTT CGCCTACACG GCGAAGCACA TGCCGAAGTT CAACAGTATC
AGCATTTCCG GCTACCATAT GCAGGAAGCC GGTGCGACCG CCGACCTCGA ACTGGCGTAT
ACCCTGGCGG ACGGTCTGGA GTATGTGCGC GCCGGGTTGA AGGCGGGTCT TTCCATCGAT
GCGTTTGCGC CGCGCATTTC GTTTTTCTGG GCGATCGGGA TGAACTACTT CATGGAGATC
GCCAAGATGC GAGCCGCACG GATGCTGTGG GCAAAGATTA TCAGGCAGTT CGACCCCAAA
GATCCGAAGT CGATGGCGTT GCGCACGCAC TGCCAGACAT CGGGCTGGAG TCTGACCGAG
CAGGATCCGT TCAACAACGT GGCGCGCACG TGTATCGAGG CGATGGCTGC CGCGCTGGGG
CACACGCAGT CGCTCCACAC GAATTCGCTG GACGAGGCGA TTGCCCTGCC GACCGACTTC
TCGGCGCGGA TTGCGCGCAA TACGCAACTG TACCTGCAAG AAGAAACCGG CATCTGCAAG
ATCATCGATC CGTGGGGCGG GTCGTACTAT CTGGAGTATC TGACCGATGC GCTGGCGCGG
CGCGCCTGGA TGCACATCCA GGAAGTCGAG GAACTGGGCG GCATGGCGAA GGCGATCGAA
GCCGGGTTGC CGAAACTCCG CATCGAAGAA GCCGCTGCGC GTCGTCAGGC GCATATCGAC
TCTGGGCGTG AGACGATTGT CGGGGTCAAT AAGTATCGTC TGCCCTACGA GGCGCCGATT
GAAATCCTGG AGGTTGACAA TACTGCCGTG CGCCTGGCGC AGATCGAGCG ATTGAAGAAA
CTGCGCGCCG AGCGGGACGA GTCGCGCACG CAGGCGGCGC TCGATGCGCT GACTCGCGTG
GCTGCCACCG GTGAGGGCAA TCTGCTGGAA GCAGCGGTTG AAGCGGCGCG GGCGCGCGCG
ACGCTGGGAG AGATTTCGAT GGCAATGGAA AAAGTTTTCG GGCGCTACAA AGCGACCATC
CGCTCGGTTT CGGGCGTCTA CAGCAGCGAA TTCAGCGATG TCGAGCAGAT CCACCACGTG
CGCGCGCTGG CGGATGCGTT CGCAGCACGG GAAGGTCGTC GTCCGCGCAT TCTGGTCGCC
AAGATCGGGC AGGACGGGCA TGATCGCGGC GCAAAAGTGG TAGCGACCGC CTTCGCCGAT
CTCGGATTCG ACGTGGACAT CGGATCGCTC TTCCAGACGC CGGAAGAGGT GGCGCGTCAG
GCGGTCGAGA ACGATGTGCA CGTGGTGGGC GTCAGTTCGC TGGCTGCCGG GCACAAGACG
TTACTGCCAC AACTGGTTGA GGAATTGCGC AAACTCGGAC GTGAGGACAT TATGGTGGTG
ATCGGCGGTA TCATTCCGGC GCAGGATTAC GATTTTCTAC GCGCACATGG CGCAGCGATG
ATCTTCGGTC CCGGCACGAT TATCCCGGTC GCTGCCGAGA AACTCTTGCA CGAGTTGGAA
CGGCGACTGC ACGGTGATGG CGTCGAGACC GGTCCGACAG TTCAGACGCG AGACGCAGCA
TGA
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| Protein sequence | MKTPDFTTLP YRDGAAAPDR EQWRERAERE AGRPLDTLVW RTMEQLDIRP LYTAEDIAGL
EHLRFTAGIP PYLRGPYPTM YVTQPWTIRQ YAGFSTAEAS NAFYRRNLAA GQKGLSVAFD
LATHRGYDSD HPRVVGDVGK AGVAIDSVLD MKILFDGIPL DQMSVSMTMN GAVIPIMAFY
IVAAEEQGVR QDQLTGTIQN DILKEYMVRN TYIYPPEPSM RIIADIFAYT AKHMPKFNSI
SISGYHMQEA GATADLELAY TLADGLEYVR AGLKAGLSID AFAPRISFFW AIGMNYFMEI
AKMRAARMLW AKIIRQFDPK DPKSMALRTH CQTSGWSLTE QDPFNNVART CIEAMAAALG
HTQSLHTNSL DEAIALPTDF SARIARNTQL YLQEETGICK IIDPWGGSYY LEYLTDALAR
RAWMHIQEVE ELGGMAKAIE AGLPKLRIEE AAARRQAHID SGRETIVGVN KYRLPYEAPI
EILEVDNTAV RLAQIERLKK LRAERDESRT QAALDALTRV AATGEGNLLE AAVEAARARA
TLGEISMAME KVFGRYKATI RSVSGVYSSE FSDVEQIHHV RALADAFAAR EGRRPRILVA
KIGQDGHDRG AKVVATAFAD LGFDVDIGSL FQTPEEVARQ AVENDVHVVG VSSLAAGHKT
LLPQLVEELR KLGREDIMVV IGGIIPAQDY DFLRAHGAAM IFGPGTIIPV AAEKLLHELE
RRLHGDGVET GPTVQTRDAA
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