More than 300 homologs were found in PanDaTox collection
for query gene Tmel_1860 on replicon NC_009616
Organism: Thermosipho melanesiensis BI429



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013946  Mrub_0930  methylmalonyl-CoA mutase large subunit  61.92 
 
 		 518 aa  654    Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  0.380206 
 
 
-
 
NC_013922  Nmag_0817  methylmalonyl-CoA mutase, large subunit  55.32 
 
 		 566 aa  655    Natrialba magadii ATCC 43099  Archaea  normal  0.950939  n/a   
 
 
-
 
CP001800  Ssol_0229  methylmalonyl-CoA mutase, large subunit  56.83 
 
 		 553 aa  642    Sulfolobus solfataricus 98/2  Archaea  normal  1  n/a   
 
 
-
 
NC_002939  GSU3302  methylmalonyl-CoA mutase, putative  69.4 
 
 		 552 aa  775    Geobacter sulfurreducens PCA  Bacteria  unclonable  0.00398466  n/a   
 
 
-
 
NC_009483  Gura_0654  methylmalonyl-CoA mutase, large subunit  70.74 
 
 		 551 aa  787    Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000145738  n/a   
 
 
-
 
NC_013743  Htur_1102  methylmalonyl-CoA mutase, large subunit  55.5 
 
 		 566 aa  679    Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013525  Tter_1672  methylmalonyl-CoA mutase, large subunit  55.91 
 
 		 570 aa  665    Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013922  Nmag_0558  methylmalonyl-CoA mutase, large subunit  60.9 
 
 		 560 aa  689    Natrialba magadii ATCC 43099  Archaea  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_6260  methylmalonyl-CoA mutase, large subunit  65.92 
 
 		 517 aa  692    Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  0.593051 
 
 
-
 
NC_011831  Cagg_2545  methylmalonyl-CoA mutase, large subunit  58.41 
 
 		 564 aa  659    Chloroflexus aggregans DSM 9485  Bacteria  normal  0.80132  normal  1 
 
 
-
 
NC_009767  Rcas_4326  methylmalonyl-CoA mutase, large subunit  56.96 
 
 		 563 aa  687    Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.273661  normal  1 
 
 
-
 
NC_013522  Taci_0288  methylmalonyl-CoA mutase, large subunit  72.45 
 
 		 559 aa  853    Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_013926  Aboo_1362  methylmalonyl-CoA mutase, large subunit  67.45 
 
 		 559 aa  744    Aciduliprofundum boonei T469  Archaea  hitchhiker  0.0000000005041  n/a   
 
 
-
 
NC_013124  Afer_0726  methylmalonyl-CoA mutase, large subunit  57.01 
 
 		 526 aa  645    Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_1909  methylmalonyl-CoA mutase, large subunit  55.74 
 
 		 560 aa  651    Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.699759  normal  0.051216 
 
 
-
 
NC_007517  Gmet_3251  methylmalonyl-CoA mutase  70.24 
 
 		 552 aa  783    Geobacter metallireducens GS-15  Bacteria  normal  0.34428  hitchhiker  0.00000000000000179062 
 
 
-
 
NC_011891  A2cp1_2096  methylmalonyl-CoA mutase, large subunit  55.22 
 
 		 588 aa  669    Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_3481  methylmalonyl-CoA mutase, large subunit  68.46 
 
 		 551 aa  764    Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_3380  methylmalonyl-CoA mutase, large subunit  55 
 
 		 559 aa  665    Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_0259  methylmalonyl-CoA mutase  67.4 
 
 		 549 aa  742    Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.101753  n/a   
 
 
-
 
NC_007760  Adeh_1834  methylmalonyl-CoA mutase  54.68 
 
 		 588 aa  662    Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.243116  n/a   
 
 
-
 
NC_009972  Haur_4552  methylmalonyl-CoA mutase, large subunit  62.02 
 
 		 521 aa  636    Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_2691  methylmalonyl-CoA mutase, large subunit  59.29 
 
 		 545 aa  672    Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_0214  methylmalonyl-CoA mutase, large subunit  56.77 
 
 		 557 aa  687    Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010003  Pmob_0549  methylmalonyl-CoA mutase, large subunit  71.84 
 
 		 559 aa  824    Petrotoga mobilis SJ95  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_1622  methylmalonyl-CoA mutase, large subunit  64.94 
 
 		 521 aa  714    Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013946  Mrub_0698  methylmalonyl-CoA mutase large subunit  56.88 
 
 		 551 aa  636    Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009675  Anae109_1988  methylmalonyl-CoA mutase, large subunit  53.87 
 
 		 588 aa  636    Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013202  Hmuk_2889  methylmalonyl-CoA mutase, large subunit  60.54 
 
 		 560 aa  691    Halomicrobium mukohataei DSM 12286  Archaea  normal  0.0576126  normal  0.895278 
 
 
-
 
NC_013061  Phep_3607  methylmalonyl-CoA mutase, large subunit  66.79 
 
 		 515 aa  702    Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011891  A2cp1_0281  methylmalonyl-CoA mutase, large subunit  67.76 
 
 		 549 aa  746    Anaeromyxobacter dehalogenans 2CP-1  Bacteria  decreased coverage  0.0034305  n/a   
 
 
-
 
NC_009675  Anae109_0281  methylmalonyl-CoA mutase, large subunit  67.03 
 
 		 549 aa  762    Anaeromyxobacter sp. Fw109-5  Bacteria  decreased coverage  0.000219849  normal  0.200381 
 
 
-
 
NC_008009  Acid345_1023  methylmalonyl-CoA mutase  66.92 
 
 		 542 aa  729    Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.85938 
 
 
-
 
NC_008009  Acid345_1454  methylmalonyl-CoA mutase  57.96 
 
 		 599 aa  650    Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013744  Htur_3831  methylmalonyl-CoA mutase, large subunit  54.16 
 
 		 566 aa  635    Haloterrigena turkmenica DSM 5511  Archaea  normal  1  n/a   
 
 
-
 
NC_013440  Hoch_3688  methylmalonyl-CoA mutase, large subunit  62.38 
 
 		 537 aa  701    Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.0115893 
 
 
-
 
NC_011145  AnaeK_0270  methylmalonyl-CoA mutase, large subunit  67.94 
 
 		 549 aa  747    Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_1283  methylmalonyl-CoA mutase  61.5 
 
 		 531 aa  698    Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_2481  methylmalonyl-CoA mutase  59.11 
 
 		 565 aa  656    Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013744  Htur_4362  methylmalonyl-CoA mutase, large subunit  55.4 
 
 		 566 aa  659    Haloterrigena turkmenica DSM 5511  Archaea  normal  0.15027  n/a   
 
 
-
 
NC_008554  Sfum_0458  methylmalonyl-CoA mutase, large subunit  60.11 
 
 		 559 aa  712    Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.484451  normal  0.420898 
 
 
-
 
NC_008609  Ppro_0523  methylmalonyl-CoA mutase, large subunit  68.31 
 
 		 551 aa  761    Pelobacter propionicus DSM 2379  Bacteria  unclonable  0.000000113835  n/a   
 
 
-
 
NC_010718  Nther_1486  methylmalonyl-CoA mutase  68.31 
 
 		 559 aa  787    Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  0.220657 
 
 
-
 
NC_013743  Htur_1992  methylmalonyl-CoA mutase, large subunit  61.44 
 
 		 560 aa  694    Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_014212  Mesil_1549  methylmalonyl-CoA mutase, large subunit  60.36 
 
 		 529 aa  649    Meiothermus silvanus DSM 9946  Bacteria  normal  0.815883  normal  1 
 
 
-
 
NC_013202  Hmuk_2165  methylmalonyl-CoA mutase, large subunit  53.63 
 
 		 567 aa  645    Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  1 
 
 
-
 
NC_012029  Hlac_1016  methylmalonyl-CoA mutase, large subunit  60.72 
 
 		 558 aa  706    Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.172359  normal  1 
 
 
-
 
NC_012918  GM21_0572  methylmalonyl-CoA mutase, large subunit  68.72 
 
 		 550 aa  790    Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000000115409 
 
 
-
 
NC_009718  Fnod_1752  methylmalonyl-CoA mutase, large subunit  84.7 
 
 		 554 aa  953    Fervidobacterium nodosum Rt17-B1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010085  Nmar_0954  methylmalonyl-CoA mutase large subunit  58.72 
 
 		 532 aa  645    Nitrosopumilus maritimus SCM1  Archaea  n/a    hitchhiker  0.00417375 
 
 
-
 
NC_014212  Mesil_1720  methylmalonyl-CoA mutase, large subunit  56.98 
 
 		 551 aa  644    Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_0843  methylmalonyl-CoA mutase, large subunit  56.26 
 
 		 550 aa  654    Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.511417 
 
 
-
 
NC_009616  Tmel_1860  methylmalonyl-CoA mutase, large subunit  100 
 
 		 559 aa  1149    Thermosipho melanesiensis BI429  Bacteria  decreased coverage  0.0000937746  n/a   
 
 
-
 
NC_011145  AnaeK_2026  methylmalonyl-CoA mutase, large subunit  55.4 
 
 		 588 aa  669    Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_010320  Teth514_1855  methylmalonyl-CoA mutase, large subunit  72.3 
 
 		 560 aa  833    Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_009253  Dred_1768  methylmalonyl-CoA mutase, large subunit  53.96 
 
 		 560 aa  646    Desulfotomaculum reducens MI-1  Bacteria  normal  0.0288235  n/a   
 
 
-
 
NC_012029  Hlac_1182  methylmalonyl-CoA mutase, large subunit  53.55 
 
 		 566 aa  649    Halorubrum lacusprofundi ATCC 49239  Archaea  normal  1  hitchhiker  0.00000166 
 
 
-
 
NC_013131  Caci_0774  methylmalonyl-CoA mutase, large subunit  57.92 
 
 		 527 aa  634  1e-180  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.817325  normal  0.286297 
 
 
-
 
NC_008025  Dgeo_0862  methylmalonyl-CoA mutase, alpha subunit  55.58 
 
 		 548 aa  630  1e-179  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  0.473507 
 
 
-
 
NC_009380  Strop_0832  methylmalonyl-CoA mutase, large subunit  57.14 
 
 		 547 aa  629  1e-179  Salinispora tropica CNB-440  Bacteria  normal  0.682429  normal  0.0142114 
 
 
-
 
NC_009953  Sare_0776  methylmalonyl-CoA mutase, large subunit  56.7 
 
 		 527 aa  626  1e-178  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.140535 
 
 
-
 
NC_009440  Msed_0638  methylmalonyl-CoA mutase  55.1 
 
 		 553 aa  627  1e-178  Metallosphaera sedula DSM 5348  Archaea  normal  1  normal  0.187219 
 
 
-
 
NC_013947  Snas_0775  methylmalonyl-CoA mutase large subunit  58.49 
 
 		 526 aa  623  1e-177  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_5523  methylmalonyl-CoA mutase, large subunit  55.66 
 
 		 537 aa  622  1e-177  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_2131  methylmalonyl-CoA mutase  53.25 
 
 		 569 aa  617  1e-175  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_013440  Hoch_5723  methylmalonyl-CoA mutase, large subunit  56.51 
 
 		 543 aa  608  9.999999999999999e-173  Haliangium ochraceum DSM 14365  Bacteria  normal  0.974466  normal  1 
 
 
-
 
NC_009717  Xaut_5021  methylmalonyl-CoA mutase, large subunit  50.9 
 
 		 562 aa  583  1.0000000000000001e-165  Xanthobacter autotrophicus Py2  Bacteria  normal  0.749996  normal  1 
 
 
-
 
NC_008826  Mpe_B0541  methylmalonyl-CoA mutase  50.64 
 
 		 562 aa  577  1.0000000000000001e-163  Methylibium petroleiphilum PM1  Bacteria  normal  0.46948  hitchhiker  0.00133344 
 
 
-
 
NC_008578  Acel_0674  methylmalonyl-CoA mutase  51.51 
 
 		 555 aa  574  1.0000000000000001e-162  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009050  Rsph17029_3657  methylmalonyl-CoA mutase, large subunit  49.91 
 
 		 563 aa  570  1e-161  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.748454  normal  0.0699604 
 
 
-
 
NC_009338  Mflv_2387  methylmalonyl-CoA mutase, large subunit  51.3 
 
 		 557 aa  567  1e-160  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.415653  normal  1 
 
 
-
 
NC_004310  BR1190  methylmalonyl-CoA mutase  53.42 
 
 		 712 aa  563  1.0000000000000001e-159  Brucella suis 1330  Bacteria  normal  0.942727  n/a   
 
 
-
 
NC_009943  Dole_0079  methylmalonyl-CoA mutase  53.45 
 
 		 706 aa  564  1.0000000000000001e-159  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.373309  n/a   
 
 
-
 
NC_008146  Mmcs_3826  methylmalonyl-CoA mutase  51.69 
 
 		 559 aa  563  1.0000000000000001e-159  Mycobacterium sp. MCS  Bacteria  normal  0.642912  n/a   
 
 
-
 
NC_008705  Mkms_3900  methylmalonyl-CoA mutase  51.69 
 
 		 548 aa  563  1.0000000000000001e-159  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_4261  methylmalonyl-CoA mutase, large subunit  52.38 
 
 		 529 aa  562  1.0000000000000001e-159  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.440573 
 
 
-
 
NC_009921  Franean1_4310  methylmalonyl-CoA mutase, large subunit  51.23 
 
 		 525 aa  563  1.0000000000000001e-159  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.57946 
 
 
-
 
NC_009077  Mjls_3812  methylmalonyl-CoA mutase  51.69 
 
 		 548 aa  565  1.0000000000000001e-159  Mycobacterium sp. JLS  Bacteria  normal  0.887759  normal  0.207369 
 
 
-
 
NC_013595  Sros_1703  Methylmalonyl-CoA mutase  50.46 
 
 		 555 aa  558  1e-158  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.236995 
 
 
-
 
NC_009667  Oant_2001  methylmalonyl-CoA mutase  52.68 
 
 		 714 aa  558  1e-157  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_009380  Strop_3608  methylmalonyl-CoA mutase, large subunit  49.26 
 
 		 562 aa  556  1e-157  Salinispora tropica CNB-440  Bacteria  normal  0.898932  normal  0.283748 
 
 
-
 
NC_013131  Caci_1274  methylmalonyl-CoA mutase, large subunit  49.91 
 
 		 563 aa  553  1e-156  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009953  Sare_3989  methylmalonyl-CoA mutase, large subunit  49.07 
 
 		 562 aa  554  1e-156  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.000975641 
 
 
-
 
NC_013124  Afer_1791  methylmalonyl-CoA mutase, large subunit  52.01 
 
 		 556 aa  553  1e-156  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.0908947  n/a   
 
 
-
 
NC_009719  Plav_1702  methylmalonyl-CoA mutase  52.04 
 
 		 718 aa  546  1e-154  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  0.0321557 
 
 
-
 
NC_008699  Noca_1802  methylmalonyl-CoA mutase  49.36 
 
 		 562 aa  545  1e-154  Nocardioides sp. JS614  Bacteria  normal  0.241911  n/a   
 
 
-
 
NC_014210  Ndas_0363  methylmalonyl-CoA mutase, large subunit  48.89 
 
 		 575 aa  545  1e-153  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011992  Dtpsy_1849  methylmalonyl-CoA mutase  53.07 
 
 		 720 aa  542  1e-153  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_008782  Ajs_2040  methylmalonyl-CoA mutase  53.26 
 
 		 720 aa  544  1e-153  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009621  Smed_5086  methylmalonyl-CoA mutase, large subunit  46.79 
 
 		 545 aa  540  9.999999999999999e-153  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007794  Saro_0811  methylmalonyl-CoA mutase  52.12 
 
 		 714 aa  539  9.999999999999999e-153  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.251875  n/a   
 
 
-
 
NC_013235  Namu_3099  methylmalonyl-CoA mutase, large subunit  48.43 
 
 		 567 aa  541  9.999999999999999e-153  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000000149706  hitchhiker  0.00000336315 
 
 
-
 
NC_009952  Dshi_0726  methylmalonyl-CoA mutase  53.27 
 
 		 712 aa  539  9.999999999999999e-153  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.999011  normal  1 
 
 
-
 
NC_013947  Snas_1393  methylmalonyl-CoA mutase large subunit  46.23 
 
 		 578 aa  541  9.999999999999999e-153  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009511  Swit_2891  methylmalonyl-CoA mutase  50.96 
 
 		 716 aa  535  1e-151  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  0.17991 
 
 
-
 
NC_008254  Meso_0856  methylmalonyl-CoA mutase  48.97 
 
 		 714 aa  537  1e-151  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009620  Smed_4237  methylmalonyl-CoA mutase  51.38 
 
 		 712 aa  535  1e-151  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010814  Glov_3260  methylmalonyl-CoA mutase, large subunit  50.92 
 
 		 713 aa  534  1e-150  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_009049  Rsph17029_0867  methylmalonyl-CoA mutase  51.73 
 
 		 709 aa  533  1e-150  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.134958  normal  1 
 
 
-
 
NC_009379  Pnuc_0910  methylmalonyl-CoA mutase  53.26 
 
 		 739 aa  534  1e-150  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.736612  n/a   
 
 
-
 
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