| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3260 |
|---|
| Symbol | |
|---|
| ID | 6365921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 3487103 |
|---|
| End bp | 3489244 |
|---|
| Gene Length | 2142 bp |
|---|
| Protein Length | 713 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642678680 |
|---|
| Product | methylmalonyl-CoA mutase, large subunit |
|---|
| Protein accession | YP_001953486 |
|---|
| Protein GI | 189426309 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
|---|
| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCAT TTGAGAAAAA GACACTGCAA GATTGGGAAA AACTGGCCAG TAAAGAGATC
AAGAAGGAAA CGACTGCACC GTTGGTGTGG GATACTGCAG AGGGAATTCC GGTTAAGCCG
CTCTACACCC AGGCTGATCT GGAGAAACTG GAAACTGTCG ATACCATGCC CGGCTTTGCC
CCATTTCTGC GTGGTCCCAA GGCCAGCATG TATGCCGGAC GTCCCTGGAC GGTGCGGCAG
TATGCCGGTT TTTCCACAGC TGAAGAATCC AACGCCTTTT ATCGCCGAAA TCTGGCAGCC
GGACAACAAG GTCTGTCAGT AGCCTTTGAC CTGGCAACTC ACCGCGGCTA CGATTCAGAC
CATCCCCGCG TGGTTGGTGA TGTTGGCAAG GCTGGTGTAG CCATTGATTC AATTTTGGAT
ATGGAGGTGC TTTTCAAGGA TATTCCGCTG GCAGATGTAT CGGTGTCTAT GACCATGAAC
GGCGCGGTGC TGCCTATCCT TGCACTCTAC ATTGTTGCTG CTGAAGAGCA GGGGGTCTCC
AAAGATAAGC TGGCCGGTAC GATCCAGAAC GACATCCTTA AAGAGTTTAT GGTCCGTAAC
ACCTATATCT ACCCGCCCGC CCCCTCAATG CGTATAATTG CCGATATTAT CGAGTATACC
AGCAAGTATA TGCCCAAGTT TAACTCCATC TCCATCAGTG GTTACCATAT TCAGGAGGCT
GGGGCCAACA ATGTTCAGGA GCTGGCTTTT ACTCTGGCTG ACGGGATTGA ATATGTGAAG
GCGGCCTTGG CTAAAGGGCT GGAGGTGGAC CAGTTTGCGC CGCGTCTCTC CTTCTTTTTT
GCCATCGGTA TGAACTTCTT TATGGAGGTT GCCAAGCTAC GGGCGGCCCG TTTCCTCTGG
GCAGAGCTGA TGTCTCAGTT TAACCCCAAG AATCCGCTCT CCCTGGCCCT GCGAACCCAT
TGCCAGACCT CTGGCTGGAG CCTGACCGAG CAAGACCCGT ACAACAACGT GATTCGTACT
ACTATTGAGG CCATGGCGGC GGTGCTGGGT GGCACCCAGT CCCTGCATAC TAACGCCCTT
GATGAGGCGA TTGCCCTGCC CACCGAGCAT TCTGCCCGGA TTGCCCGTAA TACCCAGCTG
GTTATTCAGG AAGAATCTGG CATCACCAGG GTGGTTGATC CGCTGGCTGG CTCCTACTAT
GTTGAGTCCC TGACCGCCTC ACTGATCGAG GAAGGGCGCA AGCTGATTGC CGAGATCGAC
AGTCTGGGCG GTATGACCAA GGCGATTGAA TCCGGCATGC CCAAGCTGAA GATTGAAGAA
TCAGCAGCCC GCAAGCAGGC CCGGATCGAT ATTGGCAGTG AAGTAATCGT CGGAGTCAAT
AAGTACAAAC TTGCCAAGGA AAATCCGATT GAGACGCTGG ATATTGACAA CACCGCAGTG
CGTGAGGCCC AGATCGCCCG CCTCAAGAAG CTGCGGGCAG AGCGTAGCGA GGCCGACTGC
CAGGCAGCCC TGCAGGCCAT TACCAAAGTG GCAGAGACTG GGGTGGGGAA CCTGCTGGAG
GCCTGTGTGG ATGCAGCTCG CAAGCGGGCT TCGGTAGGCG AAATTTCTGA TGCCATGGAG
AAGGTCTTTG GTCGACATAA GGCAGAGATC AAGTTGGTTT CGGGGGTATA CGGAAAAGTG
TTCGAAGAGA GCGAAGAGTT TGCGGCCTTG AAAAAAGAGG TGGATGACTT TGCGGAAGGT
GAAGGACGTC GTCCCCGGAT TCTGATCGCC AAGATGGGGC AGGACGGTCA TGACCGTGGC
GCAAAGGTTA TTGCCACCGC CTTTGCCGAC GTCGGCTTTG ACGTGGATAT GGGACCCCTG
TTCCAGACCC CGGAAGAGAC TGCCAAGATG GCGGTTGAAA ACGATGTCCA CGTAATCGGC
GTTTCCAGTC TGGCAGCCGG TCACAAGACC TTGGTGCCGC AACTGGTGGC AGAGCTGAAG
AAGCTTGATG CTGCTGATAT CGTCGTGGTC TGCGGTGGAG TGATTCCACG CCAGGATTAC
GAAGAGCTGT ATGCTGCCGG TGCTGCCTGC ATCTTCGGGC CGGGCACGCC CATCACCAAA
TCAGCTCGTG AGACGCTGGA AGCGATTAAG AAAAAGGCGT AA
|
|---|
| Protein sequence | MSAFEKKTLQ DWEKLASKEI KKETTAPLVW DTAEGIPVKP LYTQADLEKL ETVDTMPGFA
PFLRGPKASM YAGRPWTVRQ YAGFSTAEES NAFYRRNLAA GQQGLSVAFD LATHRGYDSD
HPRVVGDVGK AGVAIDSILD MEVLFKDIPL ADVSVSMTMN GAVLPILALY IVAAEEQGVS
KDKLAGTIQN DILKEFMVRN TYIYPPAPSM RIIADIIEYT SKYMPKFNSI SISGYHIQEA
GANNVQELAF TLADGIEYVK AALAKGLEVD QFAPRLSFFF AIGMNFFMEV AKLRAARFLW
AELMSQFNPK NPLSLALRTH CQTSGWSLTE QDPYNNVIRT TIEAMAAVLG GTQSLHTNAL
DEAIALPTEH SARIARNTQL VIQEESGITR VVDPLAGSYY VESLTASLIE EGRKLIAEID
SLGGMTKAIE SGMPKLKIEE SAARKQARID IGSEVIVGVN KYKLAKENPI ETLDIDNTAV
REAQIARLKK LRAERSEADC QAALQAITKV AETGVGNLLE ACVDAARKRA SVGEISDAME
KVFGRHKAEI KLVSGVYGKV FEESEEFAAL KKEVDDFAEG EGRRPRILIA KMGQDGHDRG
AKVIATAFAD VGFDVDMGPL FQTPEETAKM AVENDVHVIG VSSLAAGHKT LVPQLVAELK
KLDAADIVVV CGGVIPRQDY EELYAAGAAC IFGPGTPITK SARETLEAIK KKA
|
|---|
| |