| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3075 |
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| Symbol | msm |
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| ID | 5594128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 3088361 |
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| End bp | 3090505 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640922194 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_001459694 |
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| Protein GI | 157162376 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAACG TGCAGGAGTG GCAACAGCTT GCCAACAAGG AATTGAGCCG TCGGGAGAAA
ACTGTCGACT CGCTGGTTCA TCAAACCGCG GAAGGGATCG CCATCAAGCC GCTGTATACC
GAAGCCGATC TCGATAATCT GGAGGTGACA GGTACCCTTC CTGGTTTGCC GCCCTACGTT
CGTGGCCCGC GTGCCACTAT GTATACCGCC CAACCGTGGA CCATCCGTCA GTATGCTGGT
TTTTCAACAG CAAAAGAGTC CAACGCTTTT TATCGCCGTA ACCTGGCCGC CGGGCAAAAA
GGTCTTTCCG TTGCGTTTGA CCTTGCCACC CACCGTGGCT ACGACTCCGA TAACCCGCGC
GTGGCGGGCG ACGTCGGCAA AGCGGGCGTC GCTATCGACA CCGTGGAAGA TATGAAAGTC
CTGTTCGACC AGATCCCGCT GGATAAAATG TCGGTTTCGA TGACCATGAA TGGCGCAGTG
CTACCAGTAC TGGCGTTTTA TATCGTCGCC GCAGAAGAGC AAGGTGTTAC ACCTGATAAA
CTGACCGGCA CCATTCAAAA CGATATTCTC AAAGAGTACC TCTGCCGCAA CACCTATATT
TACCCACCAA AACCGTCAAT GCGCATTATC GCCGACATCA TCGCCTGGTG TTCCGGCAAC
ATGCCGCGAT TTAATACCAT CAGTATCAGC GGTTACCACA TGGGGGAAGC GGGTGCCAAC
TGCGTGCAGC AGGTAGCATT TACGCTCGCT GATGGGATTG AGTACATCAA AGCAGCAATC
TCTGCCGGAC TGAAAATTGA TGACTTCGCT CCTCGCCTGT CGTTCTTCTT CGGTATCGGC
ATGGATCTGT TTATGAACGT CGCCATGTTG CGTGCGGCAC GTTATTTATG GAGCGAAGCG
GTCAGTGGAT TTGGCGCACA GGATCCGAAA TCACTGGCGC TGCGTACCCA CTGCCAGACC
TCAGGCTGGA GCCTGACTGA ACAGGATCCG TATAACAACG TTATCCGCAC CACCATTGAA
GCACTGGCTG CGACGCTGGG CGGTACTCAG TCACTGCATA CCAACGCCTT TGACGAAGCG
CTTGGTTTGC CTACCGATTT CTCAGCACGC ATTGCCCGCA ACACCCAGAT CATCATCCAG
GAAGAATCAG AACTCTGCCG CACCGTCGAT CCACTGGCCG GATCCTATTA CATTGAGTCG
CTGACCGATC AAATCGTCAA ACAAGCCAGA GCTATTATCC AACAGATCGA CGAAGCCGGT
GGCATGGCGA AAGCGATCGA AGCAGGTCTG CCAAAACGAA TGATCGAAGA GGCCTCAGCG
CGCGAACAGT CGCTGATCGA CCAGGGCAAG CGTGTCATCG TTGGTGTCAA CAAGTACAAA
CTGGATCACG AAGACGAAAC CGATGTACTT GAGATCGACA ACGTGATGGT GCGTAACGAG
CAAATTGCTT CGCTGGAACG CATTCGCGCC ACCCGTGATG ATGCCGCCGT AACCGCCGCG
TTGAACGCCC TGACTCACGC CGCACAGCAT AACGAAAACC TGCTGGCTGC CGCTGTTAAT
GCCGCTCGCG TTCGCGCCAC CCTGGGTGAA ATTTCCGATG CGCTGGAAGT CGCTTTCGAC
CGTTATCTGG TGCCAAGCCA GTGTGTTACC GGCGTGATTG CGCAAAGCTA TCATCAGTCT
GAGAAATCGG CCTCCGAGTT CGATGCCATT GTTGCGCAAA CGGAGCAGTT CCTTGCCGAC
AATGGTCGTC GCCCGCGCAT TCTGATCGCT AAGATGGGCC AGGATGGACA CGATCGCGGC
GCGAAAGTGA TCGCCAGCGC CTATTCCGAT CTCGGTTTCG ACGTAGATTT AAGCCCGATG
TTCTCTACAC CTGAAGAGAT CGCCCGCCTG GCCGTAGAAA ACGACGTTCA CGTAGTGGGC
GCATCCTCAC TGGCTGCCGG TCATAAAACG CTGATCCCGG AACTGGTCGA AGCGCTGAAA
AAATGGGGAC GCGAAGATAT CTGCGTGGTC GTGGGTGGCG TCATTCCGCC GCAGGATTAC
GCCTTCCTGC AAGAGCGCGG CGTGGCGGCG ATTTATGGTC CAGGTACACC TATGCTCGAC
AGTGTGCGCG ACGTACTGAA TCTGATAAGC CAGCATCATG ATTAA
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| Protein sequence | MSNVQEWQQL ANKELSRREK TVDSLVHQTA EGIAIKPLYT EADLDNLEVT GTLPGLPPYV
RGPRATMYTA QPWTIRQYAG FSTAKESNAF YRRNLAAGQK GLSVAFDLAT HRGYDSDNPR
VAGDVGKAGV AIDTVEDMKV LFDQIPLDKM SVSMTMNGAV LPVLAFYIVA AEEQGVTPDK
LTGTIQNDIL KEYLCRNTYI YPPKPSMRII ADIIAWCSGN MPRFNTISIS GYHMGEAGAN
CVQQVAFTLA DGIEYIKAAI SAGLKIDDFA PRLSFFFGIG MDLFMNVAML RAARYLWSEA
VSGFGAQDPK SLALRTHCQT SGWSLTEQDP YNNVIRTTIE ALAATLGGTQ SLHTNAFDEA
LGLPTDFSAR IARNTQIIIQ EESELCRTVD PLAGSYYIES LTDQIVKQAR AIIQQIDEAG
GMAKAIEAGL PKRMIEEASA REQSLIDQGK RVIVGVNKYK LDHEDETDVL EIDNVMVRNE
QIASLERIRA TRDDAAVTAA LNALTHAAQH NENLLAAAVN AARVRATLGE ISDALEVAFD
RYLVPSQCVT GVIAQSYHQS EKSASEFDAI VAQTEQFLAD NGRRPRILIA KMGQDGHDRG
AKVIASAYSD LGFDVDLSPM FSTPEEIARL AVENDVHVVG ASSLAAGHKT LIPELVEALK
KWGREDICVV VGGVIPPQDY AFLQERGVAA IYGPGTPMLD SVRDVLNLIS QHHD
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