Gene Mpe_A1014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A1014 
Symbol 
ID4787190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp1077729 
End bp1079888 
Gene Length2160 bp 
Protein Length719 aa 
Translation table11 
GC content67% 
IMG OID640089576 
Productmethylmalonyl-CoA mutase 
Protein accessionYP_001020211 
Protein GI124266207 
COG category[I] Lipid transport and metabolism 
COG ID[COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) 
TIGRFAM ID[TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.856859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATC GCCCCGTACT TTCGCCCGAG GCCCTGGCGG CCTGGCACAA GGCCGCCGCG 
AAGTCGGCCC CCGGCGGCGA CGTGTCGGCG CTGAACTGGG TCACGCCCGA AGGCATCACT
GTGAAGCCGC TGTACACCGC GGCCGATCTG CAGGGTCTGC CGCACACCGA CACGCTGCCC
GGGTTCGCGC CCTATCTGCG CGGTCCGCAG GCCACGATGT ACGCGGTGCG GCCGTGGACC
ATCCGCCAGT ACGCCGGCTT CTCCACCGCC GAGGAATCGA ACGCCTTCTA CCGCAAGGCG
CTGGCCGCCG GCGGGCAGGG CGTGAGCGTG GCCTTCGACC TGGCCACCCA CCGCGGCTAC
GACAGCGACC ACCCGCGCGT GACCGGCGAC GTCGGCAAGG CCGGCGTGGC GATCGACAGC
GTGGAGGACA TGAAGATCCT GTTCGACGGC ATCCCGCTCG ACAAGGTGTC GGTGTCGATG
ACCATGAACG GCGCGGTGCT GCCGGTGCTG GCCGGCTACA TCGTCGCGGC CGAGGAGCAG
GGCGTGCGCC AGGACCAGCT GAGCGGGACC ATCCAGAACG ACATCCTCAA GGAGTTCATG
GTCCGCAACA CCTACATCTT CCCGCCCGAG CCGAGCATGC GGGCCATCGG CGACATCATC
GAGTACACGG CACAGAACAT GCCGAAGTTC AACTCGATCT CGATCTCCGG CTACCACATG
CAGGAGGCCG GTGCGAACCA GGCGCTGGAG CTGGCCTTCA CGCTGGCCGA CGGCAAGGAG
TACGTGCGCA CCGCGCTCGC CAAGGGCCTG AACGTCGACG AGTTCGCCGG CCGCCTGAGC
TTCTTCTGGG CGATCGGCAT GAACTTCTAT CTCGAGATCG CCAAGATGCG CGCCGCGCGC
ATGCTGTGGT GGAAGATCAT GCAGGAGTTC GAGCCCAAGA ACCCGAAGAG CCTGATGCTG
CGCACCCACT CGCAGACCTC GGGCTGGAGC CTGACCGAGC AGGACCCCTA CAACAACGTG
GTGCGCACCA CCATCGAGGC GATGGCGGCG GTGTTCGGCG GCACGCAGTC GCTGCACACC
AATGCGCTCG ACGAGGCGAT CGCGCTGCCC ACCGAGTTCA GCTCGCGCAT TGCGCGCAAC
ACCCAGCTCA TCATCCAGGA AGAGACGCAC ATCACCAACG TGGTCGACCC CTGGGCCGGC
AGCTACATGA TGGAGAAGCT CACCCAGGAC ATGGCCGATG CCGCCTGGGC CATCATCGAG
GAGGTCGAGG CGATGGGGGG CATGACCAAG GCCGTGGACT CCGGCTGGGC CAAGCTCAAG
ATCGAGGCCA GCGCGGCCGA GAAGCAGGCC CGCATCGACT CCGGCAAGGA CGTGATCGTC
GGCGTCAACA AGTACAAGCT CGACAAGGAA GACGTGGTCG ACTTCCTCGA CATCGACAAC
GTGAAGGTGC GCGACAGCCA GATCGAGCGG CTCAAGGCGA TCCGTGCGCG CCGCGACGCA
CCTGCGGTGC AGGCGGCGCT GGACGCGCTG ACACAATGCG CCGAATCCGG CCAGGGCAAC
CTGCTCGACC TGAGCGTGAA GGCGATCCGC CTGCGCGCCA CGGTCGGCGA GGTGTCCTCG
GCGCTCGAGA AGGTCTGGGG GCGCCACCGC GCCGATACGC AGAAGGTGAC CGGCGTGTAC
GCAGCTGCCT ACGACTCGGC CGAAGGCTGG GAACAACTCA AGACCGAGAT CGCGGCCTTC
GCCGACGACC ACGGCCGCCG GCCGCGCGTG ATGATCGCCA AGCTCGGCCA GGACGGCCAC
GACCGGGGCG CCAAGGTGGT GGCCACCGCC TTCGCCGACC TCGGCTACGA CGTCGACATG
GGGCCGCTGT TCCAGACGCC CGACGAATGC GCGCGCCAGG CGATCGAGAA CGACGTGCAC
GCGATCGGCG TGTCCACGCT GGCCGCCGGC CACAAGACGC TGGTGCCGGC CATCGTGGCC
GAACTGAGGA AGCAGGGCGC CGACGACATC ATCGTGTTCG TCGGTGGCGT GATCCCGCGT
CAGGACTACG ACTTCCTCTA CGAGGCCGGC GTCAAGGGCA TCTACGGTCC CGGTACGCCG
ATCCCGGCCT CGGCGAAGGA CGTGCTCGAG CAGATCAAGA AGGCCATCGC CGCGCCCTGA
 
Protein sequence
MSDRPVLSPE ALAAWHKAAA KSAPGGDVSA LNWVTPEGIT VKPLYTAADL QGLPHTDTLP 
GFAPYLRGPQ ATMYAVRPWT IRQYAGFSTA EESNAFYRKA LAAGGQGVSV AFDLATHRGY
DSDHPRVTGD VGKAGVAIDS VEDMKILFDG IPLDKVSVSM TMNGAVLPVL AGYIVAAEEQ
GVRQDQLSGT IQNDILKEFM VRNTYIFPPE PSMRAIGDII EYTAQNMPKF NSISISGYHM
QEAGANQALE LAFTLADGKE YVRTALAKGL NVDEFAGRLS FFWAIGMNFY LEIAKMRAAR
MLWWKIMQEF EPKNPKSLML RTHSQTSGWS LTEQDPYNNV VRTTIEAMAA VFGGTQSLHT
NALDEAIALP TEFSSRIARN TQLIIQEETH ITNVVDPWAG SYMMEKLTQD MADAAWAIIE
EVEAMGGMTK AVDSGWAKLK IEASAAEKQA RIDSGKDVIV GVNKYKLDKE DVVDFLDIDN
VKVRDSQIER LKAIRARRDA PAVQAALDAL TQCAESGQGN LLDLSVKAIR LRATVGEVSS
ALEKVWGRHR ADTQKVTGVY AAAYDSAEGW EQLKTEIAAF ADDHGRRPRV MIAKLGQDGH
DRGAKVVATA FADLGYDVDM GPLFQTPDEC ARQAIENDVH AIGVSTLAAG HKTLVPAIVA
ELRKQGADDI IVFVGGVIPR QDYDFLYEAG VKGIYGPGTP IPASAKDVLE QIKKAIAAP