Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_0811 |
Symbol | |
ID | 3915865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 862984 |
End bp | 865128 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640443542 |
Product | methylmalonyl-CoA mutase |
Protein accession | YP_496090 |
Protein GI | 87198833 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit [COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.251875 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAGA AGACACTGGC AGATTGGCAG GCCGCCGCCG CCAAGGAAGT GAAGGGAAAG GACCTGACCT GGCAGACGCC CGAGGGCATC GCCGTCAAGC CGCTCTACAC CGCCGACGAC GTCACCGCCG ATCCGGGGCT GCCCGGCTTC GCGCCGTTCA CGCGCGGCGT TCGGGCCTCG ATGTATGCGG GGCGGCCATG GACGATCCGC CAGTACGCCG GCTTTTCGAC CGCCGAGGAA TCCAACGCAT TCTATCGCCG CAACCTTGCC GCCGGGCAGA AGGGCCTGTC GGTCGCGTTC GACCTTGCGA CGCACCGCGG CTATGACTCC GACCACCCGC GCGTCGTGGG CGATGTCGGC AAGGCGGGCG TGGCCATCGA CAGCGTCGAG GACATGAAGA TCCTGTTCGA CGGCATCCCG CTCGACCAGA TGTCGGTCTC GATGACCATG AACGGCGCGG TGATCCCGAT CCTGGCGTTC TTCATCGTCG CGGGCGAGGA GCAGGGCGTC GACCGCAAGC TGCTCGACGG GACCATCCAG AACGACATCC TCAAGGAGTT CATGGTCCGC AACACCTACA TCTACCCGCC CGAGCCGAGC ATGCGGATCA TCTCGGACAT CTTCGGCTAC ACCAGCCGCG AGATGCCGAA GTTCAACTCG ATCTCGATTT CCGGCTATCA CATGCAGGAA GCCGGGGCGA CGCAGGTGCA GGAACTCGCG TTCACCATCG CCGACGGCAT GGAGTACGTG AAGTACGGCG TGGCCTCGGG CCTCGACATC GACAAGTTTG CCGGCCGCCT GTCGTTCTTC TTCGCCATCG GCATGAACTT CTTCATGGAA GTGGCCAAGC TGCGCGCCGC GCGCGTGCTG TGGCACCGCG TGATGACGAA GCTGGGCGCG CAGGACGAGC GTTCGAAGAT GCTGCGCACG CACTGCCAGA CCTCGGGCGT GAGCCTGCAG GAGCAGGACC CCTACAACAA CGTCATCCGC ACCACGATCG AGGCGATGGC CGCAATGCTG GGCGGCACCC AGTCGCTCCA CACCAACGCG CTCGACGAAG CCATTGCGCT GCCCACCGAC TTTTCCGCCC GTATTGCGCG CAACACGCAG ATCGTGATCC AGGAAGAGAC GGGCATGTGC AACGTGGTCG ATCCGCTCGG CGGGTCGTAC TACATCGAGG CGCTGACGCA GGAACTGGTC GACAAGGCCT GGGAGATCAT CGAGCGTGTC GAAGCTGAAG GCGGCATGGC CAAGGCCGTG GCGGCGGGCT GGCCCAAGGC GATGATCGAG GAAGCCGCCG CTGGCCGGCA GGCCCGCGTC GACAGGGGCG AGGACGTGAT CGTCGGCGTC AACAAGTACC GGCTTGCCAG CGAGGACAAG CTCGAAACGC TTGAAGTGGA CAACCACGTT GTCCGCGAGG CGCAGATCGC CCGGATCAAG CGCGTGCGCG AAACCCGCGA CGAGACCAAG TGCCGCGCAG CGCTCAATGC CCTTACCGAA GGTGCAAAGA CCGGCGGCAA CCTGCTTGAG CTAGCTGTCG AAGCCGCTCG CCACCGTGCG ACGCTGGGCG AGATTTCCGA CGCGATGGAA GTCGTGTTCG GCCGCCACGG TACGTTCCCG ACGCCGGTGA AGGGCGTCTA CGGTTCGGCA TATGCCGGAG ACAGCCGCTA CCAGCAGGTT CTCGATGGCG TCGAGGCCGT GACGCGCCGC CTCGGCCGCA AGCCCCGCAT GCTCGTCGCC AAGATGGGGC AGGACGGGCA CGATCGCGGT GCCAACGTGA TCGCGTCGGC CTTTGGCGAC ATGGGCTTCG AGGTGACTAG CGGCCCGCTG TTCCAGACTC CCGAGGAGGC CGCTGCGCTG GCGCTGGAGA AGGACGTCGA CGCCGTCGGA GCATCCTCGC TTGCCGCCGG TCACAAGACG CTGATCCCCG AACTGATCGG CCATCTCAAG GCGGCCGGCC GCCCCGACAT CAAGGTCGTG GCGGGCGGGG TGATCCCGCC GCAGGACTAC GACTTCCTGC GCGAAGCCGG GGTGCAGGGG ATCTACGGCC CGGGCTCGAA CGTGGTCGAA TGCGCCGCCG ACATGCTGCG CCTGCTTGGC CACAACATGC CGCCCGCAGG GGAGGAGCTC GAAAATGCCC AATAA
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Protein sequence | MSEKTLADWQ AAAAKEVKGK DLTWQTPEGI AVKPLYTADD VTADPGLPGF APFTRGVRAS MYAGRPWTIR QYAGFSTAEE SNAFYRRNLA AGQKGLSVAF DLATHRGYDS DHPRVVGDVG KAGVAIDSVE DMKILFDGIP LDQMSVSMTM NGAVIPILAF FIVAGEEQGV DRKLLDGTIQ NDILKEFMVR NTYIYPPEPS MRIISDIFGY TSREMPKFNS ISISGYHMQE AGATQVQELA FTIADGMEYV KYGVASGLDI DKFAGRLSFF FAIGMNFFME VAKLRAARVL WHRVMTKLGA QDERSKMLRT HCQTSGVSLQ EQDPYNNVIR TTIEAMAAML GGTQSLHTNA LDEAIALPTD FSARIARNTQ IVIQEETGMC NVVDPLGGSY YIEALTQELV DKAWEIIERV EAEGGMAKAV AAGWPKAMIE EAAAGRQARV DRGEDVIVGV NKYRLASEDK LETLEVDNHV VREAQIARIK RVRETRDETK CRAALNALTE GAKTGGNLLE LAVEAARHRA TLGEISDAME VVFGRHGTFP TPVKGVYGSA YAGDSRYQQV LDGVEAVTRR LGRKPRMLVA KMGQDGHDRG ANVIASAFGD MGFEVTSGPL FQTPEEAAAL ALEKDVDAVG ASSLAAGHKT LIPELIGHLK AAGRPDIKVV AGGVIPPQDY DFLREAGVQG IYGPGSNVVE CAADMLRLLG HNMPPAGEEL ENAQ
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