| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3398 |
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| Symbol | |
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| ID | 4694586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 3767172 |
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| End bp | 3769367 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639851155 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_998137 |
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| Protein GI | 121610330 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.526303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACA AGCCCCACAG CACCGCCCCC GAGTTCGCCG CTGCTTCGCT CGAAGCCTGG
GCCAAAGCCG CTGCCAAGTC GGCGCCTGGT GGCGCTGTCG GCGCTCTGAA CTGGGTCACG
CCCGATGGCA TTACCGTCAA GCCGCTGTAC ACCGCTGCGG ACACGGCCGG GCTGCGCTAC
GCCGACACGC TGCCCGGCTT TGAGCCTTAT CTGCGCGGCC CGCAGGCCAC GATGTATGCG
GTGCGCCCCT GGACCATCCG CCAGTACGCA GGGTTCTCGA CCGCCGAGGA GTCCAACGCC
TTCTACCGCA AGGCGCTGGC GGCGGGAGGG CAGGGGGTGT CGGTGGCGTT CGACCTGGCC
ACGCACCGTG GCTATGACAG CGACCATCCC CGGGTGACGG GGGATGTGGG CAAGGCCGGT
GTGGCGATCG ACTCGGTCGA GGACATGAAG ATTTTGTTCG ACCAGATTCC GCTGGACCAG
GTGTCGGTCT CGATGACCAT GAACGGCGCG GTGCTGCCCG TGCTGGCCGG CTATGTGGTG
GCGGCCGAGG AGCAGGGCGT GCGCCAGGAG CAGCTCTCCG GGACGATTCA GAACGATATC
CTGAAAGAGT TCATGGTGCG CAATACCTAT ATCTATCCGC CCAAGCCGTC GATGCGGATC
ATTGGCGACA TCATCGGCTA CACGGCCAGC CACATGCCCC GGTTCAACTC GATCTCGATC
TCGGGCTACC ACATGCAAGA GGCCGGAGCC AACCAGGCGC TGGAGTTGGC CTTCACGCTG
GCCGATGGCA AGGAGTATGT GAAGACTGCG CTGGCCCGGG GCATGGATGT CGATGAGTTC
GCCGGGCGCC TGTCGTTCTT CTGGGCCGTA GGCATGAATT TCTATCTGGA GGTGGCCAAG
ATGCGCGCGG CACGCCTGCT GTGGTGCCGC ATCATGAAGC AGACCGGGGC CAGAAATCCC
AAGAGCCTGA TGCTGCGCAC GCATTGCCAG ACCTCGGGCT GGTCGCTGAC CGAGCAGGAC
CCTTACAACA ACGTGGTGCG CACCACCATC GAGGCCATGG CGGCGGTGTT TGGCGGCACG
CAGAGCTTGC ACACCAACGC ATTCGATGAA GCCATCGCGC TGCCCACCGA GTTCAGCGCC
CGCATTGCGC GCAATACGCA GCTCATCCTC CAGGAGGAGA CCCACATCGC CAAGGTGATC
GACCCCTGGG CCGGCTCGTA CATGATGGAA AAACTCACGC AGGATATGGC CGATGCGGCG
TGGGCCATCA TCGAAGAAGT CGAGGCCATG GGCGGCATGA CCCGGGCGGT GGACAGCGGC
TGGGCCAAGC TGAAGATCGA AGCCGCTGCC GCGCAAAAAC AGGCCCGCAT CGATAGCGGC
CAGGACGTGA TCGTGGGCGT GAACAAATAC CAGCCCGGGA CCGAGGATGT CATCGAGGTG
CGCGACATCG ACAACGTGGC GGTGCGCCAC GGGCAAATTG CCCGTCTGCA AAAAATGAAA
GCGGGGCGCG ACACCGCCGG CGTGCACGCG GCACTGGACG CCATCACGCT TGCGGCGCAG
AACGGCTCGG GGAACCTGCT GGAACTGAGC ATTCAGGCGA TGCGCTTGCG GGCCACCGTG
GGGGAAGTGA GCGACGCGCT GGAAAAAGCC TTTGGCCGGC ACCGCGCAGA CAGCAACAAG
GTCTCGGGCG TATACGCGGC GGCCTACGAC AGCGCGCAGG CGGACACCAT GGAATACTGG
AATGCGCTGA AGGCCGACAT TGCCGCCTTT GCCGACAAAC AGGGGCGCCG CCCGCGCGTC
ATGGTCAGCA AACTGGGCCA GGATGGCCAC GACCGTGGCG CCAAGGTCGT GGCCACGGCC
TTTGCCGACC TGGGCTTTGA CGTGGACATC GGCCCGCTGT TCCAGACGCC CGAGGAATGC
GCACGCCAGG CGATCGAAAA CGACGTGCAC GCCGTGGGCG TGTCCACACT GGCCGCCGGC
CACAAAACGC TGGTGCCGGC CATCATTGCC GCGCTCAAGG CGCAGGGGGC CGACGACATC
ATCGTGTTCG TCGGCGGGGT GATTCCGCGC CAGGACTACG ATTTTCTGTA CGCCGCCGGT
GTGCATGGCA TCTACGGCCC GGGCACGCCG ATTCCGGTCA GCGCACGCGA CGTACTGCGC
CAGATCGAAA AGACGCTCGC GGCGACGGGC AAGTAA
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| Protein sequence | MSDKPHSTAP EFAAASLEAW AKAAAKSAPG GAVGALNWVT PDGITVKPLY TAADTAGLRY
ADTLPGFEPY LRGPQATMYA VRPWTIRQYA GFSTAEESNA FYRKALAAGG QGVSVAFDLA
THRGYDSDHP RVTGDVGKAG VAIDSVEDMK ILFDQIPLDQ VSVSMTMNGA VLPVLAGYVV
AAEEQGVRQE QLSGTIQNDI LKEFMVRNTY IYPPKPSMRI IGDIIGYTAS HMPRFNSISI
SGYHMQEAGA NQALELAFTL ADGKEYVKTA LARGMDVDEF AGRLSFFWAV GMNFYLEVAK
MRAARLLWCR IMKQTGARNP KSLMLRTHCQ TSGWSLTEQD PYNNVVRTTI EAMAAVFGGT
QSLHTNAFDE AIALPTEFSA RIARNTQLIL QEETHIAKVI DPWAGSYMME KLTQDMADAA
WAIIEEVEAM GGMTRAVDSG WAKLKIEAAA AQKQARIDSG QDVIVGVNKY QPGTEDVIEV
RDIDNVAVRH GQIARLQKMK AGRDTAGVHA ALDAITLAAQ NGSGNLLELS IQAMRLRATV
GEVSDALEKA FGRHRADSNK VSGVYAAAYD SAQADTMEYW NALKADIAAF ADKQGRRPRV
MVSKLGQDGH DRGAKVVATA FADLGFDVDI GPLFQTPEEC ARQAIENDVH AVGVSTLAAG
HKTLVPAIIA ALKAQGADDI IVFVGGVIPR QDYDFLYAAG VHGIYGPGTP IPVSARDVLR
QIEKTLAATG K
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