| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3688 |
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| Symbol | |
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| ID | 8546078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 5074082 |
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| End bp | 5075695 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646388356 |
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| Product | methylmalonyl-CoA mutase, large subunit |
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| Protein accession | YP_003268082 |
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| Protein GI | 262196873 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
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| TIGRFAM ID | [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0115893 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCGG CCATCGTGAC CGCGGAAAAG AAGACCCATC GCACCGACGC CGGCATCGAG
ATCCAGGGAG CCTACGGGCC CGCCGACCTG CCCGAGGGCT GGGATGCCGA GCGCGAGCTC
GGCGCCCCCG GCGCCTACCC ATACACCCGC GGCATCCGCG AGACCATGTA CCGCGGCCGC
AACTGGACCA TGCGCCAGTA CGCGGGCTTC GGCACCGCCG CGGAGTCGAA CCAGCGCTAC
CACTACCTGC TCTCACAGGG CAGCAAGGGC CTGTCGGTGG CCTTCGACCT GCCGACGCAG
ATGGGCCGCG ACTCCGACCA CGCCATGTCC CGCGGCGAGG TCGGCCGGGT CGGCGTGGCC
ATCGACTCGC TCGAGGATAT GCGCGTGCTG CTCGACCGCC TGCCGCTCGA TCAGATCTCG
ACCTCGATGA CCATCAACGC CACCGCGGCC ACGCTGCTGG CCCTGTACGT GGCGGTCGCC
GACGAGCGCG GCATCGCGCG CTCGGCCCTG CGCGGCACCA TCCAGAACGA CATCCTCAAG
GAGTACATCG CGCGCGGCAC CTACATCTAT CCGCCCGCGG GCTCCATGCG GCTCATCACC
GACACCTTCA CCTTCTGCAA CGCCGAGGTG CCGCAGTGGA ACACGGTGTC GATCAGCGGC
TACCACATCC GCGAGGCCGG CGCCGACGCC GTGCAGGAGG TCGCGTTCAC GCTCGCCGAC
GGCATCACCT ACGTCGAGAC CGCGCTCGCC GCCGGCCTCG ACGTCGACGA CTTCGCGCCG
CGGCTGTCGT TCTTCTTCAA CGTGCACAAC AACTTCCTCG AGGAGGTCGC CAAGTTCCGG
GCCGCCCGGC GCATGTGGGC GCGCATCATG AAAGAGCGCT TCGGCGCCAA GAAGCCCAAG
AGCTGGCTCT TGCGCTTCCA CAGCCAGACC GCGGGCGTGA CCCTGCAGGC CCAGCAGCCG
CTGGTCAACG TGTGCCGCGT GACCCTGCAG GCGCTGGCCT CGGTGCTCGG CGGCACCCAG
TCGCTGCACA CCAACTCCTA CGACGAGGCC CTGGGCCTGC CCACCGAGGA GTCGGCGCGG
CTGGCGCTGC GCACCCAGCA GGTCATCGCC CACGAGTCCG GGGTCACCGA CTTCATCGAC
CCCTTCGCCG GCTCCTACGC CATCGAGAGC CTCACCGATC GCATCGAGCG CGACGCCCGC
GCCTACCTGG CCAAGATCGA CGAGCTCGGC GGCGTGATCC CGGCCATCGA GCAGGGCTAC
ATGCAGCGCG AGATCCAGCG CCGCGCCTAC GAGCATCAGC GCGCGGTCGA GACCCGCGCC
AAGATCGTCG TCGGCGTCAA CGAGTTCCAG CAGCAGGAAG AGGCGCCGGT GGACATCGCC
GCCATCGACC CCGAGCTCGA GCGCGCCCAG GTCGAGCGCC TCAGCGCCCT GCGCGCGCGT
CGCGACGCCG CCGAGACCGA GCGCGCGCTC AAGAACCTGG GCGACGCCGC CCGCGGCAGC
GACAACCTGC TGCCCGCCAT CCTCGGCGCG GTCAAGGCCA TGGCCACCGT GGGCGAGATC
GCCGACGTCA TGCGCGAGAT CTACGGCGAG TACCAGCCGA CCTTCGCCAT GTAG
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| Protein sequence | MIPAIVTAEK KTHRTDAGIE IQGAYGPADL PEGWDAEREL GAPGAYPYTR GIRETMYRGR
NWTMRQYAGF GTAAESNQRY HYLLSQGSKG LSVAFDLPTQ MGRDSDHAMS RGEVGRVGVA
IDSLEDMRVL LDRLPLDQIS TSMTINATAA TLLALYVAVA DERGIARSAL RGTIQNDILK
EYIARGTYIY PPAGSMRLIT DTFTFCNAEV PQWNTVSISG YHIREAGADA VQEVAFTLAD
GITYVETALA AGLDVDDFAP RLSFFFNVHN NFLEEVAKFR AARRMWARIM KERFGAKKPK
SWLLRFHSQT AGVTLQAQQP LVNVCRVTLQ ALASVLGGTQ SLHTNSYDEA LGLPTEESAR
LALRTQQVIA HESGVTDFID PFAGSYAIES LTDRIERDAR AYLAKIDELG GVIPAIEQGY
MQREIQRRAY EHQRAVETRA KIVVGVNEFQ QQEEAPVDIA AIDPELERAQ VERLSALRAR
RDAAETERAL KNLGDAARGS DNLLPAILGA VKAMATVGEI ADVMREIYGE YQPTFAM
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