| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3008 |
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| Symbol | |
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| ID | 5084608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 3073034 |
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| End bp | 3074992 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640484581 |
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| Product | methylmalonyl-CoA mutase, large subunit |
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| Protein accession | YP_001169199 |
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| Protein GI | 146279040 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.842553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.248307 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGA AGGATAGCCC CTGGCTGTTC CGAACCTACG CCGGCCATTC CACGGCAAGG
GCCTCGAACG CACTCTACCG CACCAACCTT GCCAAGGGGC AGACGGGTCT GTCGGTCGCC
TTCGACCTGC CGACCCAGAC CGGCTATGAC AGCGACCACG AGCTTGCGCG CGGCGAGGTG
GGCAAGGTGG GCGTTCCGAT CTGCCACCTG GGCGACATGC GGACGCTGTT CGACCAGATC
CCGCTCGAGC AGATGAACAC CTCGATGACG ATCAACGCCA CGGCGCCGTG GCTGCTCGCG
CTCTACATCG CGGTGGCCGA GGAGCAGGGG GCGGATGTCT CGAAGCTGCA GGGCACGGTG
CAGAACGACC TGATGAAGGA GTATCTCAGC CGCGGCACCT ACATCTGCCC GCCCAAGCCC
TCGCTGCGCA TGATCACCGA CGTGGCGGCC TACACGCGGG TGCACCTGCC CAAGTGGAAC
CCGATGAACG TCTGCTCCTA CCACCTGCAG GAGGCCGGCG CCACGCCCGA GCAGGAGCTG
GCCTTCGCGC TGGCCACCGG CATCGCGGTG CTCGACGACC TGCGCACGAA GGTTCCGGCC
GAGCATTTCC CGGCGATGGT GGGCCGGATC TCGTTCTTCG TGAACGCCGG CATCCGCTTC
GTCACCGAGA TGTGCAAGAT GCGCGCCTTC GTCGATCTCT GGGATGAGAT CTGCCGCGAC
CGCTACGGCA TCGAGGAGGA GAAATACCGC CGCTTCCGCT ATGGCGTGCA GGTGAACTCG
CTCGGCCTGA CCGAGCAGCA GCCGGAGAAC AACGTCTATC GCATCCTGAT CGAGATGCTG
GCGGTGACGC TCTCGAAGAA GGCCCGCGCC CGCGCGGTGC AGTTGCCCGC CTGGAACGAG
GCGCTGGGGC TGCCGCGGCC CTGGGATCAG CAATGGTCGC TTCGGATGCA GCAGATCCTC
GCCTACGAAT CGGACCTGCT GGAATATGAG GATCTGTTCG ACGGCAACCC CGCGGTCGAG
CGCAAGGTCG AGGCGCTGAA GGCCGGCGCG CGGGAAGAGC TGGCCCATAT CGACGCGATG
GGCGGCGCGA TCGAGGCGAT CGACTACATG AAGGCGCGCC TCGTCGAATC GAACGCCGAG
CGCATCGCCC GCGTCGAATC GGGCGAAACG GTGGTGGTGG GCGTGAACCG CTGGACCAGT
GGCGCGCCCT CGCCGCTCAC CACGGGCGAT GGCGCGATCA TGGTGGCCGA CCCGGAAGCC
GAGCGCGATC AGGTCGAGCG GCTGAAGGGC TGGCGCGCCG CGCGCGACGA GGCCGCCGTG
ACCGCCGCGC TGGCCGAACT GCGCCGCGCC GCCACCTCGG GCGAGAATGT GATGCCCGCC
TCGATCGCCG CCGCCAAGGC GGGCGCCACT ACCGGCGAAT GGGCGGCCGA ACTGCGCCGC
GCCTTCGGCG AGTTCCGCGG CCCCACCGGC GTCTCGCGCG CGCCCTCGAA CCGGACCGAC
GGCCTCGACC CGATCCGCGA GGCGGTGCAG GCGGTCTCGG CGCGCCTCGG CCGGCCGCTG
AAGTTCGTCG TCGGCAAGCC GGGCCTCGAT GGCCATTCCA ACGGCGCCGA GCAGATCGCC
GCCCGCGCGC GGGATTGCGG AATGGACATC ACCTATGACG GCATCCGCCT CACCCCCGCC
GAGATCGTCG CCAAGGCAGT CGAGGATCAG GCGCATGTGA TCGGCCTGTC GATCCTCTCG
GGCTCGCACA TGCCGCTGGT GACGGAGGTG CTGGCCGAGA TGCGCCGCGT CTCGCTCGAC
GTTCCGCTGA TCGTTGGCGG CATCATTCCC GAGGAGGATG CCGAGCAACT CCGCGCAATG
GGCGTGGCCG CCGTCTATAC GCCCAAGGAT TTCGAGCTGA ACCGGATCAT GATGGACATC
GTGGGCCTCG TGGACCGGAC GGCCCTCGCG GCGGAGTAA
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| Protein sequence | MTQKDSPWLF RTYAGHSTAR ASNALYRTNL AKGQTGLSVA FDLPTQTGYD SDHELARGEV
GKVGVPICHL GDMRTLFDQI PLEQMNTSMT INATAPWLLA LYIAVAEEQG ADVSKLQGTV
QNDLMKEYLS RGTYICPPKP SLRMITDVAA YTRVHLPKWN PMNVCSYHLQ EAGATPEQEL
AFALATGIAV LDDLRTKVPA EHFPAMVGRI SFFVNAGIRF VTEMCKMRAF VDLWDEICRD
RYGIEEEKYR RFRYGVQVNS LGLTEQQPEN NVYRILIEML AVTLSKKARA RAVQLPAWNE
ALGLPRPWDQ QWSLRMQQIL AYESDLLEYE DLFDGNPAVE RKVEALKAGA REELAHIDAM
GGAIEAIDYM KARLVESNAE RIARVESGET VVVGVNRWTS GAPSPLTTGD GAIMVADPEA
ERDQVERLKG WRAARDEAAV TAALAELRRA ATSGENVMPA SIAAAKAGAT TGEWAAELRR
AFGEFRGPTG VSRAPSNRTD GLDPIREAVQ AVSARLGRPL KFVVGKPGLD GHSNGAEQIA
ARARDCGMDI TYDGIRLTPA EIVAKAVEDQ AHVIGLSILS GSHMPLVTEV LAEMRRVSLD
VPLIVGGIIP EEDAEQLRAM GVAAVYTPKD FELNRIMMDI VGLVDRTALA AE
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