More than 300 homologs were found in PanDaTox collection
for query gene Gobs_4128 on replicon NC_013757
Organism: Geodermatophilus obscurus DSM 43160



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010505  Mrad2831_1106  methylmalonyl-CoA mutase, large subunit  61.82 
 
 		 680 aa  819    Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010338  Caul_0836  methylmalonyl-CoA mutase, large subunit  64.36 
 
 		 662 aa  852    Caulobacter sp. K31  Bacteria  normal  0.733808  normal  0.66979 
 
 
-
 
NC_013739  Cwoe_4193  methylmalonyl-CoA mutase, large subunit  68.42 
 
 		 670 aa  872    Conexibacter woesei DSM 14684  Bacteria  normal  0.669168  normal  0.90036 
 
 
-
 
NC_009921  Franean1_1034  methylmalonyl-CoA mutase, large subunit  77.32 
 
 		 666 aa  1004    Frankia sp. EAN1pec  Bacteria  normal  0.488774  normal  0.762762 
 
 
-
 
NC_009428  Rsph17025_3008  methylmalonyl-CoA mutase, large subunit  64.26 
 
 		 652 aa  810    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.842553  normal  0.248307 
 
 
-
 
NC_007493  RSP_0961  methylmalonyl-CoA mutase  63.96 
 
 		 652 aa  806    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007643  Rru_A3062  methylmalonyl-CoA mutase  65.59 
 
 		 671 aa  868    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_0038  methylmalonyl-CoA mutase, large subunit  63.1 
 
 		 690 aa  834    Methylobacterium nodulans ORS 2060  Bacteria  normal  0.579469  n/a   
 
 
-
 
NC_007777  Francci3_2169  methylmalonyl-CoA mutase  72.18 
 
 		 692 aa  979    Frankia sp. CcI3  Bacteria  normal  0.485789  normal  0.751366 
 
 
-
 
NC_010725  Mpop_0366  methylmalonyl-CoA mutase, large subunit  61.84 
 
 		 688 aa  820    Methylobacterium populi BJ001  Bacteria  normal  0.560359  normal  1 
 
 
-
 
NC_009719  Plav_1625  methylmalonyl-CoA mutase, large subunit  65.08 
 
 		 667 aa  849    Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007802  Jann_0797  methylmalonyl-CoA mutase  62.79 
 
 		 654 aa  827    Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009720  Xaut_1197  methylmalonyl-CoA mutase, large subunit  64.92 
 
 		 657 aa  846    Xanthobacter autotrophicus Py2  Bacteria  normal  0.282186  normal  1 
 
 
-
 
NC_009953  Sare_4003  methylmalonyl-CoA mutase, large subunit  73.8 
 
 		 685 aa  925    Salinispora arenicola CNS-205  Bacteria  normal  0.446619  hitchhiker  0.000372138 
 
 
-
 
NC_008043  TM1040_3106  methylmalonyl-CoA mutase  63.62 
 
 		 661 aa  845    Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013757  Gobs_4128  methylmalonyl-CoA mutase, large subunit  100 
 
 		 667 aa  1347    Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_0036  methylmalonyl-CoA mutase, large subunit  62.61 
 
 		 675 aa  831    Methylobacterium sp. 4-46  Bacteria  normal  0.0637775  decreased coverage  0.00272797 
 
 
-
 
NC_011757  Mchl_0334  methylmalonyl-CoA mutase, large subunit  62.24 
 
 		 688 aa  823    Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013124  Afer_0223  methylmalonyl-CoA mutase, large subunit  59.39 
 
 		 647 aa  715    Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.784456  n/a   
 
 
-
 
NC_008687  Pden_3875  methylmalonyl-CoA mutase, large subunit  64.88 
 
 		 688 aa  823    Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_1772  methylmalonyl-CoA mutase  73.84 
 
 		 680 aa  986    Nocardioides sp. JS614  Bacteria  normal  0.292142  n/a   
 
 
-
 
NC_009952  Dshi_2855  methylmalonyl-CoA mutase  64.89 
 
 		 657 aa  852    Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009049  Rsph17029_2621  methylmalonyl-CoA mutase, large subunit  63.8 
 
 		 652 aa  803    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_1226  methylmalonyl-CoA mutase, large subunit  75.23 
 
 		 672 aa  990    Catenulispora acidiphila DSM 44928  Bacteria  normal  0.6728  normal  0.0673448 
 
 
-
 
NC_010172  Mext_0290  methylmalonyl-CoA mutase, large subunit  62.08 
 
 		 688 aa  823    Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.515512 
 
 
-
 
NC_009380  Strop_3621  methylmalonyl-CoA mutase, large subunit  73.73 
 
 		 668 aa  921    Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009943  Dole_0079  methylmalonyl-CoA mutase  38.04 
 
 		 706 aa  430  1e-119  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.373309  n/a   
 
 
-
 
NC_008025  Dgeo_1320  methylmalonyl-CoA mutase  38.73 
 
 		 722 aa  431  1e-119  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007512  Plut_1292  methylmalonyl-CoA mutase  36.79 
 
 		 714 aa  422  1e-117  Chlorobium luteolum DSM 273  Bacteria  normal  1  normal  0.816153 
 
 
-
 
NC_009441  Fjoh_0014  methylmalonyl-CoA mutase  36.75 
 
 		 711 aa  425  1e-117  Flavobacterium johnsoniae UW101  Bacteria  normal  0.185174  n/a   
 
 
-
 
NC_007514  Cag_1223  methylmalonyl-CoA mutase  36.92 
 
 		 712 aa  421  1e-116  Chlorobium chlorochromatii CaD3  Bacteria  normal  1  n/a   
 
 
-
 
NC_010803  Clim_0868  methylmalonyl-CoA mutase  36.76 
 
 		 715 aa  419  1e-116  Chlorobium limicola DSM 245  Bacteria  normal  1  n/a   
 
 
-
 
NC_011059  Paes_0875  methylmalonyl-CoA mutase, large subunit  36.94 
 
 		 1081 aa  419  1e-116  Prosthecochloris aestuarii DSM 271  Bacteria  normal  1  normal  0.036821 
 
 
-
 
NC_010814  Glov_3260  methylmalonyl-CoA mutase, large subunit  37.87 
 
 		 713 aa  419  9.999999999999999e-116  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_008639  Cpha266_1164  methylmalonyl-CoA mutase  37.56 
 
 		 713 aa  419  9.999999999999999e-116  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.197015  n/a   
 
 
-
 
NC_011060  Ppha_1167  methylmalonyl-CoA mutase  36.86 
 
 		 712 aa  415  1e-114  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.169366  n/a   
 
 
-
 
NC_009049  Rsph17029_0867  methylmalonyl-CoA mutase  37.1 
 
 		 709 aa  415  1e-114  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.134958  normal  1 
 
 
-
 
NC_007493  RSP_2192  methylmalonyl-CoA mutase  36.95 
 
 		 709 aa  412  1e-113  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.172259  n/a   
 
 
-
 
NC_014165  Tbis_1920  methylmalonyl-CoA mutase large subunit  38.29 
 
 		 720 aa  410  1e-113  Thermobispora bispora DSM 43833  Bacteria  normal  0.0552222  normal  0.617547 
 
 
-
 
NC_008254  Meso_0856  methylmalonyl-CoA mutase  37.33 
 
 		 714 aa  410  1e-113  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009511  Swit_2891  methylmalonyl-CoA mutase  37.85 
 
 		 716 aa  407  1.0000000000000001e-112  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  0.17991 
 
 
-
 
NC_011992  Dtpsy_1849  methylmalonyl-CoA mutase  36.34 
 
 		 720 aa  406  1.0000000000000001e-112  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_009718  Fnod_1752  methylmalonyl-CoA mutase, large subunit  43.85 
 
 		 554 aa  408  1.0000000000000001e-112  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_3872  methylmalonyl-CoA mutase  38.58 
 
 		 740 aa  406  1.0000000000000001e-112  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.231489  normal  0.125312 
 
 
-
 
NC_009523  RoseRS_0545  methylmalonyl-CoA mutase  38.73 
 
 		 740 aa  407  1.0000000000000001e-112  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012793  GWCH70_2294  methylmalonyl-CoA mutase  37.15 
 
 		 731 aa  407  1.0000000000000001e-112  Geobacillus sp. WCH70  Bacteria  normal  0.895743  n/a   
 
 
-
 
NC_014230  CA2559_07125  methylmalonyl-CoA mutase  35.98 
 
 		 707 aa  408  1.0000000000000001e-112  Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
NC_010831  Cphamn1_1173  methylmalonyl-CoA mutase, large subunit  35.9 
 
 		 1106 aa  406  1.0000000000000001e-112  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  decreased coverage  0.00593374 
 
 
-
 
NC_008752  Aave_2510  methylmalonyl-CoA mutase  36.2 
 
 		 722 aa  407  1.0000000000000001e-112  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  0.178476 
 
 
-
 
NC_013411  GYMC61_0279  methylmalonyl-CoA mutase  37.74 
 
 		 731 aa  405  1e-111  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007298  Daro_4006  methylmalonyl-CoA mutase  35.59 
 
 		 716 aa  405  1e-111  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013522  Taci_0288  methylmalonyl-CoA mutase, large subunit  44.06 
 
 		 559 aa  402  1e-111  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_2805  methylmalonyl-CoA mutase  36.11 
 
 		 719 aa  403  1e-111  Rhodoferax ferrireducens T118  Bacteria  normal  0.147831  n/a   
 
 
-
 
NC_013159  Svir_05680  methylmalonyl-CoA mutase  38.6 
 
 		 726 aa  405  1e-111  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010571  Oter_3304  methylmalonyl-CoA mutase, large subunit  37.13 
 
 		 719 aa  403  1e-111  Opitutus terrae PB90-1  Bacteria  decreased coverage  0.00679496  normal  0.683271 
 
 
-
 
NC_009428  Rsph17025_2300  methylmalonyl-CoA mutase  37.21 
 
 		 709 aa  403  1e-111  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008044  TM1040_1865  methylmalonyl-CoA mutase  37.1 
 
 		 661 aa  405  1e-111  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_6418  methylmalonyl-CoA mutase  38.58 
 
 		 729 aa  403  1e-111  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_009719  Plav_1702  methylmalonyl-CoA mutase  37.11 
 
 		 718 aa  404  1e-111  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  0.0321557 
 
 
-
 
NC_013757  Gobs_4373  methylmalonyl-CoA mutase, large subunit  39.12 
 
 		 735 aa  403  1e-111  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_008782  Ajs_2040  methylmalonyl-CoA mutase  36.02 
 
 		 720 aa  403  1e-111  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013730  Slin_6640  methylmalonyl-CoA mutase, large subunit  35.87 
 
 		 724 aa  402  1e-111  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.70273 
 
 
-
 
NC_002950  PG1657  methylmalonyl-CoA mutase  36.83 
 
 		 715 aa  400  9.999999999999999e-111  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.387473 
 
 
-
 
NC_007794  Saro_0811  methylmalonyl-CoA mutase  38.07 
 
 		 714 aa  401  9.999999999999999e-111  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.251875  n/a   
 
 
-
 
NC_007802  Jann_3367  methylmalonyl-CoA mutase  37.07 
 
 		 709 aa  400  9.999999999999999e-111  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009616  Tmel_1860  methylmalonyl-CoA mutase, large subunit  43.65 
 
 		 559 aa  400  9.999999999999999e-111  Thermosipho melanesiensis BI429  Bacteria  decreased coverage  0.0000937746  n/a   
 
 
-
 
NC_008781  Pnap_2383  methylmalonyl-CoA mutase  36.71 
 
 		 718 aa  402  9.999999999999999e-111  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A1014  methylmalonyl-CoA mutase  36.28 
 
 		 719 aa  400  9.999999999999999e-111  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  0.856859 
 
 
-
 
NC_012791  Vapar_2127  methylmalonyl-CoA mutase  36.69 
 
 		 720 aa  402  9.999999999999999e-111  Variovorax paradoxus S110  Bacteria  normal  0.063815  n/a   
 
 
-
 
NC_013037  Dfer_5804  methylmalonyl-CoA mutase  34.98 
 
 		 972 aa  396  1e-109  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.256305  normal  0.17905 
 
 
-
 
NC_011353  ECH74115_4213  methylmalonyl-CoA mutase  37.13 
 
 		 714 aa  397  1e-109  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007925  RPC_1760  methylmalonyl-CoA mutase  37.29 
 
 		 718 aa  397  1e-109  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  0.226069 
 
 
-
 
NC_013510  Tcur_2505  methylmalonyl-CoA mutase, large subunit  39.2 
 
 		 736 aa  396  1e-109  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000422516  n/a   
 
 
-
 
NC_007964  Nham_2638  methylmalonyl-CoA mutase  36.73 
 
 		 720 aa  397  1e-109  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_009800  EcHS_A3075  methylmalonyl-CoA mutase  37.13 
 
 		 714 aa  395  1e-109  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_3188  Methylmalonyl-CoA mutase  38.51 
 
 		 725 aa  397  1e-109  Streptosporangium roseum DSM 43021  Bacteria  normal  0.36577  normal  0.670701 
 
 
-
 
NC_010002  Daci_3753  methylmalonyl-CoA mutase  36.21 
 
 		 738 aa  397  1e-109  Delftia acidovorans SPH-1  Bacteria  normal  0.801598  normal  0.879758 
 
 
-
 
CP001509  ECD_02748  methylmalonyl-CoA mutase  36.98 
 
 		 714 aa  394  1e-108  Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
CP001637  EcDH1_0776  methylmalonyl-CoA mutase, large subunit  36.83 
 
 		 714 aa  392  1e-108  Escherichia coli DH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007406  Nwi_2238  methylmalonyl-CoA mutase  36.73 
 
 		 722 aa  394  1e-108  Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007643  Rru_A2479  methylmalonyl-CoA mutase  37.33 
 
 		 732 aa  394  1e-108  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_013169  Ksed_22170  methylmalonyl-CoA mutase  36.5 
 
 		 754 aa  393  1e-108  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.366718  normal  0.398515 
 
 
-
 
NC_007948  Bpro_2161  methylmalonyl-CoA mutase  36 
 
 		 723 aa  393  1e-108  Polaromonas sp. JS666  Bacteria  normal  0.385791  normal  0.481947 
 
 
-
 
NC_008576  Mmc1_0388  methylmalonyl-CoA mutase  36.6 
 
 		 714 aa  395  1e-108  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009952  Dshi_0726  methylmalonyl-CoA mutase  36.54 
 
 		 712 aa  394  1e-108  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.999011  normal  1 
 
 
-
 
NC_008687  Pden_3681  methylmalonyl-CoA mutase  36.79 
 
 		 714 aa  392  1e-108  Paracoccus denitrificans PD1222  Bacteria  normal  0.542374  normal  1 
 
 
-
 
NC_010468  EcolC_0793  methylmalonyl-CoA mutase  36.98 
 
 		 714 aa  394  1e-108  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013235  Namu_5166  methylmalonyl-CoA mutase  38.59 
 
 		 724 aa  395  1e-108  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008786  Veis_3398  methylmalonyl-CoA mutase  35.09 
 
 		 731 aa  392  1e-108  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.526303  normal  1 
 
 
-
 
NC_010498  EcSMS35_3053  methylmalonyl-CoA mutase  36.98 
 
 		 714 aa  393  1e-108  Escherichia coli SMS-3-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012892  B21_02711  hypothetical protein  36.98 
 
 		 714 aa  394  1e-108  Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
-
 
NC_009801  EcE24377A_3244  methylmalonyl-CoA mutase  36.98 
 
 		 714 aa  394  1e-108  Escherichia coli E24377A  Bacteria  normal  0.98625  n/a   
 
 
-
 
NC_009720  Xaut_4731  methylmalonyl-CoA mutase  39.2 
 
 		 718 aa  389  1e-107  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  0.38651 
 
 
-
 
NC_007778  RPB_3538  methylmalonyl-CoA mutase  37.15 
 
 		 736 aa  391  1e-107  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.162308  normal  0.256268 
 
 
-
 
NC_009485  BBta_3021  methylmalonyl-CoA mutase  37.44 
 
 		 718 aa  390  1e-107  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.954275 
 
 
-
 
NC_010524  Lcho_2697  methylmalonyl-CoA mutase  37.02 
 
 		 720 aa  392  1e-107  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.20812 
 
 
-
 
NC_008726  Mvan_2763  methylmalonyl-CoA mutase  36.96 
 
 		 751 aa  389  1e-107  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0863781  normal  0.728933 
 
 
-
 
NC_013441  Gbro_2420  methylmalonyl-CoA mutase, large subunit  37.19 
 
 		 763 aa  391  1e-107  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_009953  Sare_0776  methylmalonyl-CoA mutase, large subunit  44.44 
 
 		 527 aa  389  1e-107  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.140535 
 
 
-
 
NC_009338  Mflv_3649  methylmalonyl-CoA mutase  37.58 
 
 		 752 aa  390  1e-107  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  0.808365 
 
 
-
 
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