| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0388 |
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| Symbol | |
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| ID | 4482132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 450310 |
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| End bp | 452454 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639721136 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_864320 |
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| Protein GI | 117923703 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCACA GCAAGCCTAC TTTGGCAGAT TGGCAAGCAC TGGCGACAAA AAGCCTGAAG
GGAAAACCGC TGGAGAGCCT GCACTGGCAC AGTGCCGAGG GTATTGAGGT TAAAAGCCTC
TACACTTCAG CCGACCTCAC GGCCCATGGT TGGGAGAGCG ACACCATGCC CGGCATGGCA
CCCTATACCC GTGGTCCCTA CCCGACCATG TATGCCAGCC GACCCTGGAC CATCCGTCAA
TATGCGGGGT TTTCTACAGC GGAAGCCTCC AACGCCTTTT ATAAACGAGC CTTGGCGGGT
GGTGGTCAGG GTATCTCTGT CGCCTTTGAT CTGGCAACGC ACCGGGGTTA TGACTCGGAC
CACCCTCGGG TGGTGGGGGA TGTAGGCAAA GCTGGGGTGG CCATAGACAG TGTGGAAGAT
ATGAAAATTT TGTTCGACGG CATTCCTTTA GACAAAGTTT CGGTCTCCAT GACTATGAAT
GGTGCGGTGC TACCCATTTT AGCGGGGTAT GTGGTGGCCG CCCGTGAACA AGGGGTTACG
GAGGATCAGC TAAGCGGCAC CATTCAGAAT GATATTCTCA AAGAGTTTAT GGTGCGCAAC
ACCTACATCT ATCCCCCTGA GCCTTCCATG CGCATTATTG GGGATATTAT TGTGTATGCC
TCTGAGCATA TGCCCAAGTT TAACACCATC TCAATCTCTG GATACCATAT TCAGGAGGCG
GGAGCGGATG CGGCCTTGGA GTTGGCCTAT ACCTTAGCGG ATGGCAAAGC CTATGTAGAG
ACAGCTATTA GCCGTGGCTT GACGGTGGAT GCTTTTGCCC CTCGCTTATC GTTTTTCTTT
GGCATTGGCA TGAATTTCTT TATGGAAGTT GCCAAGTTAC GTGCGGCGCG GCTGCTCTGG
ACGCGGATTA TGGAGGGTTT TAAACCCAGT GATCCCCGGT CGAGTATGTT ACGCACCCAC
TGTCAGACTT CGGGTTGGTC GTTGACCTCG CAAGATCCCT ACAACAACGT GGTACGCACG
ACGGTGGAGG CGATGGCGGC GGTTTTTGGT GGCACTCAAT CGTTGCACAC CAACGCATTG
GATGAGGCGA TGGCCCTACC CACGGATTTT TCGGCCCGTA TTGCCCGCAA CACCCAGCTT
ATTTTGCAGG AGGAGTGCCA CATTACCCAC GTGGTTGATC CGTGGGCGGG TTCTTACATG
ATGGAGAGTT TAACCCGGGC GTTAGCGGAG AAGGCGTGGG CGATTTTTGA GGAGGTTGAG
GCCAAGGGTG GCATGGTCAA GGCCATTGCG GCGGGTTTGC CGAGCCGCCG TATTGAGGCC
TCGGCGGCGG AGCGGCAGGC ACGTATTGAT AAGGGGTTGG ATGTGATTGT GGGGGTTAAT
CGGTATCGTC CCCCACAGGA GGATCCGGTG GATGTGTTGG TGGTGGATAA TGATGCGGTA
CGCACGTCAC AGGTAGCCCG GTTGCAGTGG GTCAAGGCGA ATCGGGACAA TGCTCAGGTG
GCGGAGATTT TGGCTCGCAT GACGGCGGCG GCGGCTTCTG GGGAGGGCAA TCTATTAGCA
CTGGCCATTG AGGCGACGGC GGCGCGGGCT ACGGGTGGGG AGATTACCAG CGCTTTGGAG
CAGGTATATG GTCGTTTTCA GGACAAAGCG CAGGCAACCA CGGGAGTGTA TGGCAAGGTG
TGGGAAGAGG ATGAGACGTG GAAGGCGTTA CGGCGGGATA TTGAGGCTTT TGCGCAGGAG
GAGGGTCGGC GTCCGCGTTT GTTGGTGGTG AAGATGGGGC AGGATGGGCA TGACCGGGGA
GCCAAGGTTA TTGCCAGTGC TTTTGCGGAT TTGGGTTTTG ATGTGGATCT TGGTCCGCTG
TTTCAGACCC CGGAGGAGGC GGCGCAGCAG GCGGTTGAGA ACGATGTGCA TGTTTTGGGG
GTATCGACCT TAGCGGGTGC GCATCATACA TTGATACCGG CGTTGATTAG GGCATTGTGT
GCGGAGCAAG CGGAGGATGT CTTGGTGGTT GCGGGTGGGG TGATCCCGGA GCAGGATTAT
GCTTTCTTGC GTGAGGCGGG GGTGGCGGAG ATTTTTGGGC CGGGCACTTC GGTGGTGGAT
GCGGCGGGTC GGGTTTTGCG GGCGATACGG GCGAAGCGGG GTTAA
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| Protein sequence | MAHSKPTLAD WQALATKSLK GKPLESLHWH SAEGIEVKSL YTSADLTAHG WESDTMPGMA
PYTRGPYPTM YASRPWTIRQ YAGFSTAEAS NAFYKRALAG GGQGISVAFD LATHRGYDSD
HPRVVGDVGK AGVAIDSVED MKILFDGIPL DKVSVSMTMN GAVLPILAGY VVAAREQGVT
EDQLSGTIQN DILKEFMVRN TYIYPPEPSM RIIGDIIVYA SEHMPKFNTI SISGYHIQEA
GADAALELAY TLADGKAYVE TAISRGLTVD AFAPRLSFFF GIGMNFFMEV AKLRAARLLW
TRIMEGFKPS DPRSSMLRTH CQTSGWSLTS QDPYNNVVRT TVEAMAAVFG GTQSLHTNAL
DEAMALPTDF SARIARNTQL ILQEECHITH VVDPWAGSYM MESLTRALAE KAWAIFEEVE
AKGGMVKAIA AGLPSRRIEA SAAERQARID KGLDVIVGVN RYRPPQEDPV DVLVVDNDAV
RTSQVARLQW VKANRDNAQV AEILARMTAA AASGEGNLLA LAIEATAARA TGGEITSALE
QVYGRFQDKA QATTGVYGKV WEEDETWKAL RRDIEAFAQE EGRRPRLLVV KMGQDGHDRG
AKVIASAFAD LGFDVDLGPL FQTPEEAAQQ AVENDVHVLG VSTLAGAHHT LIPALIRALC
AEQAEDVLVV AGGVIPEQDY AFLREAGVAE IFGPGTSVVD AAGRVLRAIR AKRG
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