Gene Namu_5166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5166 
Symbol 
ID8450797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5752203 
End bp5754377 
Gene Length2175 bp 
Protein Length724 aa 
Translation table11 
GC content71% 
IMG OID645044200 
Productmethylmalonyl-CoA mutase 
Protein accessionYP_003204424 
Protein GI258655268 
COG category[I] Lipid transport and metabolism 
COG ID[COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit 
TIGRFAM ID[TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGC CGGACAGTTT CGCCGACCTG CCGCTGCGGG ACCCGTCGGC CCCGGCCCCG 
GTCTCTGGGC CGGCCCCGGC CGAGGCAGCC GGATCCTGGC TGTCTCCCGA GGGCATCGCG
ATCAAGACCC GGTACACCGC CGCGGATCTG GCTGGCCTGG ACGCGCTGGA CACCTACCCG
GGGCTGCCCC CGTTCCTGCG CGGCCCGTAC CCGACGATGT ACACCACCCA GCCGTGGACC
ATCCGCCAGT ACGCGGGCTT TTCCACCGCC GCCGAGTCCA ACGCGTTCTA CCGGCGCAAC
CTGGCCGCCG GGCAGAAGGG CCTGTCGGTC GCGTTCGACC TGGCCACCCA CCGCGGCTAC
GACTCGGACC ATCCCCGGGT CGCCGGTGAC GTCGGGATGG CCGGCGTGGC CATCGATTCG
ATCTACGACA TGCGGCAGCT GTTCGATCAC ATCCCGCTGG GTTCGATCAG CGTGTCCATG
ACGATGAACG GCGCGGTGCT GCCGGTGCTG GCGCTGTACA TCGTGGCCGC CGAGGAACAG
GGGGTGCCGC CGGAGCAACT GGCCGGGACC ATCCAGAACG ACATCCTCAA GGAGTTCATG
GTCCGCAACA CCTACATCTA CCCGCCGGCC GCGTCGATGC GGATCATCTC CGACATCTTC
ACCTACACCG CGGCGAAGAT GCCCAAGTTC AACTCGATCT CGATCTCCGG CTACCACATG
CAGGAGGCCG GCGCGACGGC CGACCTGGAG CTGGCCTACA CGCTGGCCGA CGGCCTGGAG
TACCTGCGGA CCGGGGTGGC CGCCGGGTTG GACGTGGACC GCTTCGCCCC GCGGCTGAGC
TTCTTCTGGG CGATCGGCAT GAACTTCTTC ATGGAGATCG CCAAGATGCG GGCGGCTCGG
GCGATCTGGT GCCAACTGGT CGCCGGGCTC GGCGCGAAGA ACCCGAAATC GCTGCCCCTG
CGCACCCATT CGCAGACCTC CGGCTGGTCG CTGACCGCCC AGGACCCGTT CAACAACGTG
GCCCGCACCT GCATCGAGGC GATGGCCGCG ACCCAGGGCC ACACCCAGTC GCTGCACACC
AACGCGCTGG ACGAGGCGAT CGCGCTGCCC ACCGACTTCT CCGCCCGGAT CGCCCGCAAC
ACCCAGCTGC TGCTGCAGCA GGAATCCGGC ACCACCGCCA CGATCGATCC GTGGGGCGGC
TCGTACTACG TGGAGAAGCT GACCCACGAC CTGGCCGACC GGGCCTGGCA GCACATCCGC
GAGGTCGAGG ACGCCGGCGG CATGGCCAAG GCGATCGAGG CCGGCATCCC CAAGCTGCGG
ATCGAGGAGG CCGCCGCCCG CACCCAGGCC CGGATCGACT CGGGTCACCA GGCGGTCATC
GGCGTCAACC GCTACCGGGT GGACGACCAG CCGCCACTGG ACGTGCTCAG GGTGGACAAC
ACCGCCGTCC GCGCCGCCCA GATCGAGCAA CTGCGCCGGT TGCGGGCCGA GCGGGACGAG
CCGGCCGTGA CCGCAGCGCT GGCGGCGCTG ACCAACGCCG CCGGGGCCGA ACCGGTGCGC
GGCGACCTGG CCCACAACCT GCTCGCGCTG GCCGTCGACG CGGCCCGGGC CAAGGCCACC
GTCGGGGAGA TCTCCGCGGC GCTGGAGCAG GTCTGGGGCC GGCACACCGC CCACATCCGT
ACGATCACCG GCGTGTACCG GGCCGAGGCG GGTGACTCAC CCTTGGTCGC GCAGGTGCTC
GCGGCGACCG AGCGATTCGC GCAGGCCGAG GGGCGGCGGC CGCGCATCCT GGTCGCCAAG
ATGGGGCAGG ACGGCCACGA CCGCGGGCAG AAGGTGATCG TCTCGGCCTT CTCCGACCTG
GGGTTCGACG TCGACGTCGG CCCGCTGTTC TCCACGCCGG CCGAGGTCGC GCAGCAGGCT
GTCGACAACG ACGTGCACGT GGTCGGGGTC AACTCGCTGG CCGCCGGCCA CCTGACCCTG
GTCCCGGCCC TGCGGGACGC GCTGGCCGAG CTGGGCCGGC CCGACATCAT GATCGTGGTG
GGCGGCGTCA TCCCCCCGGC CGACGTGCCC ACGTTGCGGG AGATGGGCGC GGCGGCGGTG
TTCGGCCCCG GCACGGTCAT CGCCGAGGCC GCGCTCGACC TGTTGGATCA ACTCTCGACG
GCGCTGGCGC ACTGA
 
Protein sequence
MSVPDSFADL PLRDPSAPAP VSGPAPAEAA GSWLSPEGIA IKTRYTAADL AGLDALDTYP 
GLPPFLRGPY PTMYTTQPWT IRQYAGFSTA AESNAFYRRN LAAGQKGLSV AFDLATHRGY
DSDHPRVAGD VGMAGVAIDS IYDMRQLFDH IPLGSISVSM TMNGAVLPVL ALYIVAAEEQ
GVPPEQLAGT IQNDILKEFM VRNTYIYPPA ASMRIISDIF TYTAAKMPKF NSISISGYHM
QEAGATADLE LAYTLADGLE YLRTGVAAGL DVDRFAPRLS FFWAIGMNFF MEIAKMRAAR
AIWCQLVAGL GAKNPKSLPL RTHSQTSGWS LTAQDPFNNV ARTCIEAMAA TQGHTQSLHT
NALDEAIALP TDFSARIARN TQLLLQQESG TTATIDPWGG SYYVEKLTHD LADRAWQHIR
EVEDAGGMAK AIEAGIPKLR IEEAAARTQA RIDSGHQAVI GVNRYRVDDQ PPLDVLRVDN
TAVRAAQIEQ LRRLRAERDE PAVTAALAAL TNAAGAEPVR GDLAHNLLAL AVDAARAKAT
VGEISAALEQ VWGRHTAHIR TITGVYRAEA GDSPLVAQVL AATERFAQAE GRRPRILVAK
MGQDGHDRGQ KVIVSAFSDL GFDVDVGPLF STPAEVAQQA VDNDVHVVGV NSLAAGHLTL
VPALRDALAE LGRPDIMIVV GGVIPPADVP TLREMGAAAV FGPGTVIAEA ALDLLDQLST
ALAH