Gene Mchl_0334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_0334 
Symbol 
ID7118634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp315373 
End bp317439 
Gene Length2067 bp 
Protein Length688 aa 
Translation table11 
GC content68% 
IMG OID643523134 
Productmethylmalonyl-CoA mutase, large subunit 
Protein accessionYP_002419199 
Protein GI218528383 
COG category[I] Lipid transport and metabolism 
COG ID[COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) 
TIGRFAM ID[TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC AAGCGAGCGT CGCCGAGGTC AAGCGCGACA AGCCGTGGAT CATCCGCACC 
TATGCGGGGC ATTCCACGGC GGCGGAGTCC AACAAGCTCT ATCGCGGCAA CCTGGCCAAG
GGTCAGACCG GCCTCTCGGT CGCCTTCGAT CTGCCGACGC AGACCGGCTA CGACCCGGAT
CACGAACTCG CCCGCGGCGA GGTCGGCAAG GTCGGCGTCT CGATCGCGCA TCTCGGCGAC
ATGCGGGCCC TGTTCGATCA GATCCCGTTG GCGCAGATGA ACACCTCGAT GACGATCAAC
GCCACGGCAC CGTGGCTGTT GTCACTCTAT CTCGCGGTGG CCGAAGAGCA GGGCGCACCG
CTCGCGGCGC TCCAGGGCAC CACGCAGAAC GACATCATCA AGGAATATCT CTCGCGCGGC
ACCTACGTGT TTCCGCCCGC GCCTTCGCTG CGGCTCACCA AGGACGTGAT CCTGTTCACG
ACCAAGAACG TGCCGAAGTG GAACCCGATG AACGTCTGCT CCTACCACCT GCAAGAGGCG
GGAGCGACGC CGGTTCAGGA ACTCTCCTAC GCGCTGGCCA TCGCCATCGC CGTGCTCGAC
ACGGTGCGCG ACGATCCCGA TTTCGACGAG GCCAGCTTCT CGGACGTCTT CAGCCGGATC
TCGTTCTTCG TGAACGCCGG CATGCGGTTC GTCACCGAGA TCTGCAAGAT GCGCGCGTTT
GCCGAGCTGT GGGACGAGAT CGCCCAGGAG CGCTACGGCA TCACCGACGC CAAGAAGCGG
ATCTTCCGCT ACGGCGTGCA GGTCAACAGC CTCGGACTGA CGGAGCAGCA GCCCGAGAAC
AATGTCCACC GCATCCTGAT CGAGATGCTG GCGGTGACGC TGTCGAAGCG CGCCCGCGCC
CGCGCGGTGC AGCTCCCGGC CTGGAACGAA GCGCTCGGCC TGCCGCGCCC GTGGGACCAG
CAATGGTCGA TGCGGATGCA GCAGATCCTC GCCTTCGAGA CCGACCTGCT GGAATACGAC
GACATCTTCG ACGGCTCGAC GGTGATCGAG GCCCGAGTCG AGGCGCTCAA GGAGCAGACC
CGGGCCGAGC TGACGCGCAT CGCCGAGATC GGCGGGGCGG TCACGGCGGT CGAGGCGGGC
GAACTCAAGC GGGCGCTGGT CGAGTCGAAT GCCCGGCGCA TCTCGGCAAT CGAGAAGGGC
GAGCAGATCG TCGTCGGCGT CAACAAGTGG CAGCAGGGTG AGCCCTCGCC GCTGACGGCC
GGGGACGGCG CGATCTTCAC CGTCTCGGAG ACGGTGGAGA TGGAGGCCGA GGCCCGTATC
CGCGAATGGC GCTCCAAGCG CGACGACCGG GCGGTCGGCC AGGCGCTCGC CGATCTGGAA
CAGGCCGCGC GCTCGGGCGC CAACATCATG CCGCCCTCCA TCGCCGCCGC GAAGGCGGGC
GTGACGACGG GCGAGTGGGG CCAGCGCCTG CGCGAGGTGT TCGGCGAATA CCGCGCGCCC
ACGGGTGTGA CGCTGCAGAC CGTCACCTCC GGGGCTGCCG AAGATGCCCG CCTGCTCATC
GCCGATCTCG GCGAACGGCT CGGCGAGACG CCCCGCCTCG TGGTCGGCAA GCCGGGCCTC
GACGGCCATT CCAACGGCGC CGAGCAGATC GCTTTGCGCG CCCGCGATGT CGGCTTCGAT
GTGACCTATG ACGGCATCCG CCAGACGCCG ACCGAGATCG TCGCCAAGGC GAAGGAACGC
GGCGCCCACG TCATCGGCCT CTCGGTGCTG TCGGGCAGCC ACGTCCCCCT GGTGCGCGAG
GTGAAGGCCA AGCTGCGCGA GGCTGGGCTC GATCACGTGC CGGTCGTCGT CGGCGGCATC
ATCTCGACCG AGGACGAGCT GGTGCTCAAG AATATGGGCG TCACCGCCGT CTACACGCCG
AAGGATTACG AGCTCGACAA GATCATGGTC GGGCTTGCCA AGGTGGTGGA GCGGGCGCTC
GACAAGCGCG CTGCCGACCG GGCGGATACG GAGGCCGGCG TGCCGGGCGC GCCGAAGCGG
AACGAGAGCG GGGCGCAGGT CTTCTGA
 
Protein sequence
MSAQASVAEV KRDKPWIIRT YAGHSTAAES NKLYRGNLAK GQTGLSVAFD LPTQTGYDPD 
HELARGEVGK VGVSIAHLGD MRALFDQIPL AQMNTSMTIN ATAPWLLSLY LAVAEEQGAP
LAALQGTTQN DIIKEYLSRG TYVFPPAPSL RLTKDVILFT TKNVPKWNPM NVCSYHLQEA
GATPVQELSY ALAIAIAVLD TVRDDPDFDE ASFSDVFSRI SFFVNAGMRF VTEICKMRAF
AELWDEIAQE RYGITDAKKR IFRYGVQVNS LGLTEQQPEN NVHRILIEML AVTLSKRARA
RAVQLPAWNE ALGLPRPWDQ QWSMRMQQIL AFETDLLEYD DIFDGSTVIE ARVEALKEQT
RAELTRIAEI GGAVTAVEAG ELKRALVESN ARRISAIEKG EQIVVGVNKW QQGEPSPLTA
GDGAIFTVSE TVEMEAEARI REWRSKRDDR AVGQALADLE QAARSGANIM PPSIAAAKAG
VTTGEWGQRL REVFGEYRAP TGVTLQTVTS GAAEDARLLI ADLGERLGET PRLVVGKPGL
DGHSNGAEQI ALRARDVGFD VTYDGIRQTP TEIVAKAKER GAHVIGLSVL SGSHVPLVRE
VKAKLREAGL DHVPVVVGGI ISTEDELVLK NMGVTAVYTP KDYELDKIMV GLAKVVERAL
DKRAADRADT EAGVPGAPKR NESGAQVF