Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0014 |
Symbol | |
ID | 5090996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 11178 |
End bp | 13313 |
Gene Length | 2136 bp |
Protein Length | 711 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644739397 |
Product | methylmalonyl-CoA mutase |
Protein accession | YP_001192371 |
Protein GI | 146297780 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.185174 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAGAA AAGACCTTAA ACATATTAAC CTTCAAAGTC AACAGTCGAA AACCGAAAGC CAAAAGGCTG AAGATTTGAC TAAAAACTTC ACAACCGCCG AAGGAATCGA ACTTAAAAAA AACTATACTG AAAAAGATAT AGAAGATTTG GAGTTCATTG ATTTTGGAGC CGGCTTTACA CCCAATTTAC GCGGGCCTTA TGCTACGATG TACGTTCGTC GTCCGTGGAC GATTCGCCAG TACGCCGGAT TTTCAACCGC AGAAGAAAGT AATGCTTTTT ACAGAAGAAA TCTTGCTGCG GGTCAAAAAG GACTTTCCAT CGCTTTTGAT TTACCAACAC ACCGAGGTTA CGATTCTGAT CATGAAAGAG TTGTTGGTGA TGTTGGAAAA GCAGGTGTAG CCATCGATTC TGTTGAAGAT ATGAAGGTAT TATTCGATCA GATTCCGCTA GACGAAATGT CGGTTTCTAT GACCATGAAC GGTGCTGTTT TACCTATTAT GGCCTTTTAT ATTGTAGCAG CCGAAGAACA AGGTGTCGAA CTGAACAAAC TTTCAGGAAC AATTCAAAAT GACATTTTGA AGGAATTCAT GGTGCGCAAT ACGTATATTT ATCCACCTGC ACCTTCAATG AAAATTATTG CTGATATTTT TGAATTTACG AGCAAAAAAA TGCCAAAATT TAATTCTATC TCAATTTCAG GTTATCACAT GCAGGAAGCC GGAGCAACAG CTGATATAGA ATTAGCGTAT ACTTTGGCAG ATGGCTTAGA ATATATTCGA ACCGGATTAT CAACCGGAAT GACAATTGAT GAATTTGCTC CTCGCCTTTC TTTCTTTTGG GCAATAGGAA TGAATCATTT TATGGAAATT GCCAAAATGA GAGCCGGCCG AATGATTTGG GCAAAACTAA TTCAGCAGTT TAATCCAAAA AGTGATAAAT CATTAGCATT AAGAACGCAC TGTCAAACCA GTGGCTGGAG TTTAACAGAA CAAGATCCGT TTAATAATGT AGCCAGAACT TGTATCGAAG CTACTGCAGC CGCATTTGGA GGAACGCAGT CTTTACATAC CAATGCACTT GACGAAGCGA TTGCTCTGCC AACAGATTTT TCTGCCAGAA TTGCACGAAA TACGCAGATT TATTTACAGG AAGAAACTAA AATCACTAAA ACCGTTGATC CTTGGGGCGG CAGTTATTAT GTTGAATCTT TAACAAACGA AATTTTAGAA AATACCTGGA AACTTATTGA AGAAGTTGAG GAACTGGGCG GCATGACAAA AGCAATTGAA GCCGGAATTC CAAAACTTAG AATTGAAGAA GCAGCGGCCC GAAAACAAGC CAGAATCGAC AGCGGTCAGG ATATTATTGT TGGTGTAAAT AAATTTAGAT TAGAAAAAGA AGATCCTTTA CATATTTTGG ATGTTGATAA CCAAATGGTG CGTAAACAGC AAATTGAGCG ACTTGAAGAA ATTAAAGCAA AAAGAGATAC TGAAAAAGTA AATCTATCAC TGGAAAAATT AATTCATTGT GCCAAAACCG GAGAAGGAAA CTTACTAGAG ATTGCTATAG AAGCTGCCAG AAACAGAGCT ACACTAGGCG AAATCAGCGA TGCTCTGGAA AGTATTTTTG GAAGGTTTAA AGCACAGATT AAATCATTTA GCGGTGTGTA TAGTGCAGCA ATAAAAAACG ACGAGAATTT TGAAAAAGCA AAACAGCTGG CTGATGCTTT TGCAAAACAA GAAGGAAGAC GACCAAGAAT TATGATTGCC AAAATGGGAC AAGACGGTCA TGACCGCGGT GCAAAAGTGG TAGCAACTGG TTATGCCGAT GTGGGTTTTG ATGTAGATAT AGGTCCGTTA TTTCAAACTC CTGCTGAAGC TGCAAAACAA GCTGTAGAGA ATGATGTACA TATTTTAGGT GTTTCATCTC TTGCAGCCGG ACATAAAACA TTGGTTCCGC AAGTTATTGA GGAACTTAAG AAACATGATC GTGAAGATAT TATGGTGATT GTGGGCGGTG TAATTCCAGC ACAGGATTAT CAGTTTTTAT TTGATGCAGG TGCTGCGGCA ATTTTTGGCC CGGGAACTAA AATTAGTGAA GCGGCTATTC AAATACTTGA AATATTAATA GACTAA
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Protein sequence | MIRKDLKHIN LQSQQSKTES QKAEDLTKNF TTAEGIELKK NYTEKDIEDL EFIDFGAGFT PNLRGPYATM YVRRPWTIRQ YAGFSTAEES NAFYRRNLAA GQKGLSIAFD LPTHRGYDSD HERVVGDVGK AGVAIDSVED MKVLFDQIPL DEMSVSMTMN GAVLPIMAFY IVAAEEQGVE LNKLSGTIQN DILKEFMVRN TYIYPPAPSM KIIADIFEFT SKKMPKFNSI SISGYHMQEA GATADIELAY TLADGLEYIR TGLSTGMTID EFAPRLSFFW AIGMNHFMEI AKMRAGRMIW AKLIQQFNPK SDKSLALRTH CQTSGWSLTE QDPFNNVART CIEATAAAFG GTQSLHTNAL DEAIALPTDF SARIARNTQI YLQEETKITK TVDPWGGSYY VESLTNEILE NTWKLIEEVE ELGGMTKAIE AGIPKLRIEE AAARKQARID SGQDIIVGVN KFRLEKEDPL HILDVDNQMV RKQQIERLEE IKAKRDTEKV NLSLEKLIHC AKTGEGNLLE IAIEAARNRA TLGEISDALE SIFGRFKAQI KSFSGVYSAA IKNDENFEKA KQLADAFAKQ EGRRPRIMIA KMGQDGHDRG AKVVATGYAD VGFDVDIGPL FQTPAEAAKQ AVENDVHILG VSSLAAGHKT LVPQVIEELK KHDREDIMVI VGGVIPAQDY QFLFDAGAAA IFGPGTKISE AAIQILEILI D
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