Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3304 |
Symbol | |
ID | 6207478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 4326664 |
End bp | 4328823 |
Gene Length | 2160 bp |
Protein Length | 719 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641692970 |
Product | methylmalonyl-CoA mutase, large subunit |
Protein accession | YP_001820183 |
Protein GI | 182415117 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit [COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00679496 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.683271 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAACC TACCTGATTT CACCAAACTC GCCTACGACT CCTTCGCGTC GCTCGACGCG AAGGGCGGCC CCAAGGTGGA GGGCGAGCCG GCGATGACCT ACGAGCATAT TCCCGTCAAA CCGGTCTACA CCGCGGCGGA TCTGCCCGCC ACGAGCGAAC TCGACACGAT GCCTGGCCTC GCGCCGTTCA CCCGCGGGCC GTATGCGACG ATGTATGTCG GCAAGCCGTG GACCGTGCGC CAGTACGCCG GGTTCTCGAC CGCCGAGGAG TCGAACGCTT TCTACAAGCG CAATCTCGCC GCCGGCCAGG CGGGTTTGTC CGTCGCGTTC GATCTCGCGA CGCACCGCGG CTATGACAGC GATCACCCGC GTGTCGTCGG CGACGTCGGC AAGGCCGGCG TGGCGATCGA CTCGATCCTC GACATGCAGA CGCTGTTCAA GGACATCCCG CTGAACAAGG TTTCGGTGTC GATGACGATG AACGGCGCGG TGCTGCCGGT GATGGCGTTC TACATCTGCG CCGCCCTCGA ACAGGGCGCG AAACTCGAGG AACTCGCAGG CACGATCCAG AACGACATCC TGAAGGAGTT CATGGTGCGG AACACCTACA TCTATCCGCC GACTCCCTCG ATGAGGATCA TCGCCGACAT CTTCGCCTAC ACCTCGACGA AGATGCCGAA GTTCAACTCC ATCTCGATCT CCGGTTATCA CATGCAGGAG GCCGGAGCCA CGGCGGACCT CGAGCTGGCC TACACGCTGG CCGACGGTCT CGAATACCTG CGTACCGGGG TGAAGGCGGG GCTGGGCATC GACGCGTTCG CGCCGCGGCT CTCGTTCTTC TGGGCGATCG GCAAGAACTT CTTCATGGAA GTCGCGAAGA TGCGCGCCGC GCGCACGCTC TGGTCGGAGA TCGTCGGCCA GTTCAATCCG AAGAATCCGA AATCGCGCGC GCTGCGCACG CATTCGCAGA CGTCCGGCTG GTCGCTGACC GAGCAGGATC CGTTCAACAA CGTCGCGCGC ACTTGCCTCG AGGCGCTGGC GGCCGCCTGC GGTCACACGC AGTCGCTGCA CACCAACGCG CTCGACGAGG CGATCGCGCT GCCGACCGAT TTCTCCGCGC GCATCGCGCG CAACACGCAG CTGCACCTCC AGCAGGAAAC CGGCATCTGT CAGGTCGTCG ATCCGTGGGG CGGCAGCTAC TACGTCGAGG CGCTCACGCA CGAGCTGCTC ACGAAGGCCC GCGAGCATCT CGCCGAGGTC GAGAAGCTCG GCGGCATGAC CAAGGCGATC GAAGCGGGCA TTCCGAAGCT CCGCATCGAA GAGGCCGCGG CGCGTCGTCA GGCCCGGATC GATGCCGGCA AGGAGACGAT CGTCGGACTC AACAAATACC GGCTCGAGAA GGAAGCGCCG CTCGACATTC TCGAAGTCGA CAACACCGCG GTCCGCGAGG CGCAGATCAA GCGGTTGAAG GAACTCCGCG CGACGCGCGA TGAGCAGAAG TGCCAGGCGG CGCTCGGCGC GTTGACGACG TCGGCCAAGA GCGGACAGGG CAACCTGCTC GAACTCGCCG TCGCCGCCGC GCAGGCGCGG GCCACGCTGG GCGAAATCTC CGCGGCGCTC GAGACGGTGT TCGGACGCTA TCAGGCGCAG ATTCGCTCGA TCTCGGGCGT GTACCGCCAG GAATTCGGGG AGGACAAAGC CGTGAAGAAG ATCAAGGACA AGGTCGCGCA GTTCGAACAA CGCGAGGGCC GCCGGCCGCG CATCCTGATC GCCAAGCTGG GGCAGGACGG CCACGACCGC GGTGCCAAGG TGGTGTCGAC CGCGATGGCG GACCTCGGTT TCGACGTCGA CATTGGGCCG CTCTTCCAAA CGCCGGAAGA GGCGGCGAAG ATGGCGGTCG AGAACGACGT GCACGTAGTC GCGATGAGCT CGCTCGCCGC GGGTCACAAG ACACTGCTGC CGGCGCTGCG CGACGCGCTG AAGGCGGCCG GTCGCGACGA CATCATGATC GTGTGCGGCG GCGTGATCCC CGCGCAGGAT TACGACTTCC TGCTCGCGAA CGGTGCCAGC GCGATCTTCG GGCCCGGCAC GGTGATCCCG AAGTCGACCG ACCGCGTGCT CGACCTGCTG CTCGAGCGGC TCGAACCGGC GAACGCGTAA
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Protein sequence | MKNLPDFTKL AYDSFASLDA KGGPKVEGEP AMTYEHIPVK PVYTAADLPA TSELDTMPGL APFTRGPYAT MYVGKPWTVR QYAGFSTAEE SNAFYKRNLA AGQAGLSVAF DLATHRGYDS DHPRVVGDVG KAGVAIDSIL DMQTLFKDIP LNKVSVSMTM NGAVLPVMAF YICAALEQGA KLEELAGTIQ NDILKEFMVR NTYIYPPTPS MRIIADIFAY TSTKMPKFNS ISISGYHMQE AGATADLELA YTLADGLEYL RTGVKAGLGI DAFAPRLSFF WAIGKNFFME VAKMRAARTL WSEIVGQFNP KNPKSRALRT HSQTSGWSLT EQDPFNNVAR TCLEALAAAC GHTQSLHTNA LDEAIALPTD FSARIARNTQ LHLQQETGIC QVVDPWGGSY YVEALTHELL TKAREHLAEV EKLGGMTKAI EAGIPKLRIE EAAARRQARI DAGKETIVGL NKYRLEKEAP LDILEVDNTA VREAQIKRLK ELRATRDEQK CQAALGALTT SAKSGQGNLL ELAVAAAQAR ATLGEISAAL ETVFGRYQAQ IRSISGVYRQ EFGEDKAVKK IKDKVAQFEQ REGRRPRILI AKLGQDGHDR GAKVVSTAMA DLGFDVDIGP LFQTPEEAAK MAVENDVHVV AMSSLAAGHK TLLPALRDAL KAAGRDDIMI VCGGVIPAQD YDFLLANGAS AIFGPGTVIP KSTDRVLDLL LERLEPANA
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