| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2805 |
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| Symbol | |
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| ID | 3964255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3102341 |
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| End bp | 3104500 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637917623 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_524048 |
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| Protein GI | 89901577 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.147831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAAA ACAACCCTGA ATTTCAGACT GCCAGCCTTG AGGCCTGGGC CAAAGCGGCC
GCCAAATCCG CGCCGGGCGG CCATGTGGAG GCACTCAACT GGCACACACC GGACGGCATC
ACGGTCAAGC CGCTTTACAC CGCTGCCGAT ACCCAAAACC TGCCTTACGC CAACACCTTG
CCGGGCTTTG AGCCTTACCT GCGCGGCCCG CAGGCCACCA TGTATGCGGT GCGGCCCTGG
ACGATTCGGC AATACGCCGG TTTCTCCACC GCCGAAGAAT CCAACGCGTT TTACCGCAAG
GCGCTGGCTG CGGGCGGGCA GGGCGTGAGC GTGGCGTTCG ACCTGGCGAC CCACCGGGGC
TACGACAGCG ACCATCCCCG CGTGACAGGG GACGTGGGCA AGGCGGGCGT GGCGATTGAT
TCGGTCGAAG ACATGAAAGT GCTGTTCGAC CAGATTCCGC TGGACAAGGT GAGCGTGTCC
ATGACCATGA ACGGTGCCGT GCTGCCGGTG CTGGCAGGTT ACGTGGTGGC GGCAGAAGAG
CAGGGCGTGA GCCAGGATAA GTTGAGCGGC ACCATTCAGA ACGACATTCT GAAAGAGTTC
ATGGTGCGCA ACACCTACAT CTACCCGCCT GCACCTTCCA TGCGCATCAT TGGCGACATC
ATCGAGTACA CGGCCAAGAA CATGCCGAAG TTCAACTCGA TCTCCATTAG CGGCTACCAC
ATGCAGGAAG CCGGGGCCAA TCAGGCGCTG GAGCTGGCCT TCACGCTGGC CGACGGCAAG
GAGTATGTAA AGACCGCCAT TGCCAAGGGC ATGGATGTGG ACGAGTTCGC CGGGCGGCTC
TCTTTCTTCT GGGCCATCGG CATGAACTTC TATCTGGAAG TGGCCAAGAT GCGGGCCGCG
CGTCTGCTGT GGTGCCGCAT CATGAAAGGC TTCAACGCCA AGTCGCCCAA GTCGCTGATG
CTGCGCACCC ACTGCCAGAC CAGTGGCTGG AGCCTGACCG AGCAGGACCC CTACAACAAC
GTGGTGCGCA CCACCATCGA AGCGATGGCG GCCGTGTTTG GCGGCACGCA AAGTCTGCAC
ACCAACAGCT TTGACGAAGC CATTGCGCTG CCCACCGAAT TCAGCTCGCG TATTGCCCGC
AACACCCAGC TCATCATCCA GGAAGAAACC CATATTCCGA ACGTGATCGA CCCCTGGGCC
GGCAGCTACA TGATGGAAAA GCTGACGCAA GACATGGCAG ACGCGGCCTG GGCCATCATT
GAAGAAGTCG AGGCCATGGG TGGCATGACC CAGGCCGTTG ACAGCGGCTG GGCGAAGCTG
AAAATTGAAG CCGCTGCGGC CGAAAAGCAG GCCCGCATTG ACAGCGGTAA AGACGTGATC
GTCGGTGTCA ACAAGTACAA GCTCAAGCTA GAGGATGTGA TTGAATCGCG CGATATTGAC
AACGTGGCGG TGCGCGACGG GCAGATCGAG CGTCTCAAAA GTATCAAGCA AAAACGGGAC
CCAGCCCTCG TGAATGCTGC GTTGACAGCT ATTACTTTTG CAGCGGAAAC GGGTGAAGGC
AATTTGCTGG ATCTGGTGAT CAAAGCGATG CGCCTGCGCG CTACCGTGGG TGAGGTGAGT
GATGCCATGG AAAAAATTTA TGGGCGCCAC CGCGCCGACA CACAAAAGGT GACCGGCGTG
TATGCAGCTG CTTATGACTC CGCCGAAGGC TGGGAAGCCC TCAAGACTGA AATCAACGCA
TTTGCCGAGG CTCAGGGCCG CCGCCCGCGT GTCATGATTT CCAAACTCGG TCAGGACGGC
CACGACCGCG GCGCCAAAGT GGTGGCCACG GCGTTTGCTG ACTTGGGTTT TGACGTGGAC
ATGGGCCCGC TGTTCCAGAC CCCGGAAGAA TGCGCCCGCC AGGCGATTGA AAACGACGTG
CATGCCGTCG GCGTGAGCAC CTTGGCGGCA GGCCACAAAA CCCTGGTGCC CGCCATCATT
GCCGAACTCA AGAAGCAGGG CGCTGACGAC ATCATCGTGT TCGTCGGCGG CGTGATTCCG
CGCCAGGATT ACGAGATGCT GTATGAGGCT GGCGTCAAGG GAATTTATGG CCCCGGCACG
CCGATACCGG CCAGCGCGAA AGATGTGCTG GAGCAGATCA AGAAGGCACA GGCCAAGTAG
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| Protein sequence | MTQNNPEFQT ASLEAWAKAA AKSAPGGHVE ALNWHTPDGI TVKPLYTAAD TQNLPYANTL
PGFEPYLRGP QATMYAVRPW TIRQYAGFST AEESNAFYRK ALAAGGQGVS VAFDLATHRG
YDSDHPRVTG DVGKAGVAID SVEDMKVLFD QIPLDKVSVS MTMNGAVLPV LAGYVVAAEE
QGVSQDKLSG TIQNDILKEF MVRNTYIYPP APSMRIIGDI IEYTAKNMPK FNSISISGYH
MQEAGANQAL ELAFTLADGK EYVKTAIAKG MDVDEFAGRL SFFWAIGMNF YLEVAKMRAA
RLLWCRIMKG FNAKSPKSLM LRTHCQTSGW SLTEQDPYNN VVRTTIEAMA AVFGGTQSLH
TNSFDEAIAL PTEFSSRIAR NTQLIIQEET HIPNVIDPWA GSYMMEKLTQ DMADAAWAII
EEVEAMGGMT QAVDSGWAKL KIEAAAAEKQ ARIDSGKDVI VGVNKYKLKL EDVIESRDID
NVAVRDGQIE RLKSIKQKRD PALVNAALTA ITFAAETGEG NLLDLVIKAM RLRATVGEVS
DAMEKIYGRH RADTQKVTGV YAAAYDSAEG WEALKTEINA FAEAQGRRPR VMISKLGQDG
HDRGAKVVAT AFADLGFDVD MGPLFQTPEE CARQAIENDV HAVGVSTLAA GHKTLVPAII
AELKKQGADD IIVFVGGVIP RQDYEMLYEA GVKGIYGPGT PIPASAKDVL EQIKKAQAK
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