| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2161 |
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| Symbol | |
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| ID | 4015195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 2253732 |
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| End bp | 2255903 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637941831 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_548986 |
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| Protein GI | 91788034 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.385791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.481947 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCCA AAAAACCTTT CCCCCAGCCG GATTTCAATC CCGCCAGCCT CGAAGCATGG
GCCAAATCGG CGGCCAAATC AGCGCCCGGC GGCAATGTGA ACGCGCTGAA CTGGCAAACA
CCCGATGGCA TCAGCGTCAA GCCGCTTTAT ACCGCCGAGG ATATCGAGGG CCTGCCCTAC
ACCAACACCT TGCCGGGCTT TGAGCCCTTC ATCCGCGGTC CACAGGCCAC CATGTATGCC
GTGCGTCCCT GGACGATTCG CCAGTACGCC GGGTTTTCCA CGGCGGAAGA ATCCAATGCG
TTCTACCGCA AGGCGTTGGC TGCCGGCGGG CAGGGGGTCT CTGTCGCCTT TGACCTGGCC
ACGCACCGCG GCTATGACAG CGACCATCCG CGGGTAACCG GCGATGTCGG CAAGGCCGGC
GTGGCGATCG ACAGCGTGGA GGACATGAAG ATACTGTTCG ACCATATCCC GCTGGACAAG
GTCAGTGTCT CGATGACGAT GAACGGCGCG GTGCTGCCGG TGCTGGCCGG CTATGTGGTG
GCCGCTGAAG AGCAGGGCGT CTCGCAGGAC AAATTGAGCG GAACCATCCA GAACGACATC
CTCAAGGAGT TCATGGTCCG CAATACCTAT ATCTACCCGC CCCAGCCCAG CATCCGCATC
ATCGGCGACA TCATCGAGTA CACGGCACAG AACATGCCGA AGTTCAATTC GATTTCAATC
TCGGGCTACC ACATGCAGGA AGCCGGCGCC AACCAGGCGC TGGAGCTGGC CTTCACGCTG
GCCGACGGAA AAGAGTACGT GAAAACCGCG CTGGGCAAGG GCCTGGACGT GGATGACTTC
GCCGGGCGCC TGAGTTTCTT CTGGGCCATC GGCATGAACT TTTACCTCGA AGTCGCCAAG
ATGCGAGCGG CGCGCCTGCT GTGGTGCCGC ATCATGAAGG GCTTCAACGC CAGGAGCCCC
AAATCACTCA TGCTGCGCAC GCACTGCCAG ACCTCCGGCT GGAGCCTGAC CGAGCAGGAT
CCCTACAACA ATGTGGTGCG CACCACCATC GAGGCCATGG CGGCCGTGTT CGGCGGCACG
CAGAGCCTGC ACACCAATTC GTTTGACGAA GCGATTGCGC TGCCCACCGA GTTTTCGTCG
CGTATCGCCC GCAACACCCA GCTCATCATC CAGGAAGAAA CCCACATCCC GCACGTGATC
GACCCCTGGG CCGGCAGCTA CATGATGGAA AAACTCACCC AGGACATGGC TGATGCGGCC
TGGGCCATCA TTGAGGAAGT CGAAGCCATG GGCGGCATGA CCAAGGCGGT GGACAGCGGC
TGGGCCAAGC TCAAGATTGA GGCGGCCGCG GCTGAAAAGC AGGCGCGCAT CGACAGCGGC
AAGGACGTGA TCGTCGGTGT CAACAAATAC AAGCTCACAA CCGAAGACGC CATCGAGTCG
CGCGACATCG ACAACGTGGC CGTGCGCGAC GGGCAGATTG AGCGCCTGAA GGCCATCAAG
GCCGGGCGCG ACGGGGCCGC CGTGCAGGCC GCGCTGGACG CATTGAGCGC CGCGGCTGAA
AATAACCACG GCAACCTGCT GGACCTGAGC ATCAAGGCCG TACGCCTGCG CGCCACTGTG
GGCGAGGTCA GCGATGCACT GGAGAAAGTT TACGGGCGCC ACCGCGCCGA TACGCAAAAG
GTGACCGGTG TGTACGCTGC TGCCTATGAC TCGGCCGAAG GCTGGGAAAA CCTCAAATCT
GAAATCAACG CTTTTGCCGA GGCGCAAGGC CGCCGGCCGC GCGTGATGAT TTCAAAACTG
GGCCAGGACG GCCACGACCG CGGCGCCAAG GTGGTGGCCA CGGCCTTCGC CGACCTGGGT
TTTGACGTCG ATATGGGGCC GCTGTTCCAG ACACCCGAGG AATGCGCCCG CCAGGCGATT
GAAAACGACG TGCATGCGGT GGGCGTCTCG ACGCTGGCCG CAGGCCACAA GACGCTGGTG
CCGGCCATCA TCGCCGAACT CAAGAAGCAG GGCGCCGACG ACATCATCGT GTTTGTCGGC
GGTGTGATCC CGCGGCAGGA CTACGAAATG CTTTACGAGG CAGGCGTCAA GGGCATTTAC
GGCCCGGGTA CACCGATTCC GGCCAGTGCC AAGGATGTGC TGGAGCAGAT CAAGGCGGCG
GTGAAGGCTT GA
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| Protein sequence | MSSKKPFPQP DFNPASLEAW AKSAAKSAPG GNVNALNWQT PDGISVKPLY TAEDIEGLPY
TNTLPGFEPF IRGPQATMYA VRPWTIRQYA GFSTAEESNA FYRKALAAGG QGVSVAFDLA
THRGYDSDHP RVTGDVGKAG VAIDSVEDMK ILFDHIPLDK VSVSMTMNGA VLPVLAGYVV
AAEEQGVSQD KLSGTIQNDI LKEFMVRNTY IYPPQPSIRI IGDIIEYTAQ NMPKFNSISI
SGYHMQEAGA NQALELAFTL ADGKEYVKTA LGKGLDVDDF AGRLSFFWAI GMNFYLEVAK
MRAARLLWCR IMKGFNARSP KSLMLRTHCQ TSGWSLTEQD PYNNVVRTTI EAMAAVFGGT
QSLHTNSFDE AIALPTEFSS RIARNTQLII QEETHIPHVI DPWAGSYMME KLTQDMADAA
WAIIEEVEAM GGMTKAVDSG WAKLKIEAAA AEKQARIDSG KDVIVGVNKY KLTTEDAIES
RDIDNVAVRD GQIERLKAIK AGRDGAAVQA ALDALSAAAE NNHGNLLDLS IKAVRLRATV
GEVSDALEKV YGRHRADTQK VTGVYAAAYD SAEGWENLKS EINAFAEAQG RRPRVMISKL
GQDGHDRGAK VVATAFADLG FDVDMGPLFQ TPEECARQAI ENDVHAVGVS TLAAGHKTLV
PAIIAELKKQ GADDIIVFVG GVIPRQDYEM LYEAGVKGIY GPGTPIPASA KDVLEQIKAA
VKA
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