| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2383 |
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| Symbol | |
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| ID | 4688506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2511612 |
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| End bp | 2513768 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639835393 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_982611 |
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| Protein GI | 121605282 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCAA CGCCCACTCC TTTCAACGCC GCCAGTCTTG AAGCCTGGGC CAAATCGGCA
GCCAAATCCG CGCCCAACGG TGACCTGGAC GCCCTGAACT GGCAAACGCC CGACGGCATC
AGCGTCAAGC CGCTGTACAC CGCCGAGGAC ATCAAGGACT TGCCTTACAC CAACACCCTG
CCGGGATTCG AGCCTTTTAT TCGCGGCCCG CAAGCCACGA TGTATGCGGT GCGCCCCTGG
ACGATCCGCC AGTACGCGGG TTTTTCGACC GCCGAAGAGT CCAACGCTTT TTACCGCAAG
GCGCTGGCGG CCGGCGGGCA GGGCGTATCA GTGGCGTTTG ACTTGGCCAC GCACCGGGGT
TATGACAGCG ACCATCCGCG CGTGACGGGC GACGTTGGCA AGGCCGGCGT GGCGATTGAC
AGCGTGGAGG ACATGAAAAT CCTGTTCGAC CAGATTCCGC TCGACAAGGT CAGCGTCTCC
ATGACCATGA ACGGCGCCGT GCTGCCGGTG CTGGCAGGCT ATGTGGTGGC GGCGGAAGAG
CAGGGCGTGA GCCAGGACAA ACTCAGCGGT ACCATCCAGA ACGATGTGCT TAAAGAGTTC
ATGGTGCGCA ACACCTATAT CTATCCGCCA GCGCCCAGCA TGCGCATCAT TGGCGACATC
ATCGAATACA CGGCGCAGAA CATGCCGAAA TTCAACTCGA TTTCCATCAG CGGCTACCAC
ATGCAGGAAG CCGGCGCCAA CCAGGCACTC GAACTGGCCT TCACGCTGGC CGACGGCAAG
GAGTACGTAA AAACCGCCCT GGGCAAGGGT CTGGACGTAG ATGGTTTTGC CGGCCGCCTG
AGCTTTTTCT GGGCCGTCGG CATGAACTTC TACCTGGAAG TCGCCAAGAT GCGCGCCGCC
AGATTGCTGT GGTGCCGCAT CATGAAGGGC TTTGACGCCA AGAACCCCAA GAGCCTGATG
CTGCGCACCC ACTGCCAGAC CAGCGGCTGG AGCCTGACCG AGCAAGACCC GTACAACAAC
GTGGTGCGCA CCACCATCGA AGCCATGGCG GCGGTGTTCG GCGGCACGCA AAGCCTGCAC
ACCAATTCGT TCGACGAAGC GATTGCGCTG CCCACCGAAT TCTCGGCGCG CATTGCCCGC
AACACCCAGC TCATCATCCA GGAAGAAACC CACATCACCA GCGTGATCGA CCCCTGGGCC
GGCAGCTACA TGATGGAAAA GCTCACGCAG GACATGGCCG ACGCGGCCTG GACCCTCATC
GAGGAAGTCG AAGCCATGGG CGGCATGGTC AAGGCCGTGG ACAGTGGCTG GGCCAAGCTC
AAGATCGAAG CGGCTGCGGC TGAAAAGCAG GCCCGCATCG ACAGCGGCAA GGACGTGATC
GTCGGCGTCA ACAAGTACAA GCTCAAAACC GAAGATGCCA TCGAATCGCG CGATATCGAC
AACGTAGCGG TGCGCGATGG CCAGATTGAA CGCCTCAAGG CCATCCGGGC GCAGCGCGAT
GGTGCTGCCG TTCAGGCCGC GCTCGATGCG TTGACGCAAG CAGCTGAAGG CAACAGCGGC
AATTTGCTGG ACCTGTGCAT CAAGGCCGTG CGCCTGCGCG CCACGGTGGG CGAGGTCAGC
GACGCACTCG AAAAGGTCTA TGGCCGCCAC CGCGCCGACA CCCAGAAGGT GAGTGGCGTG
TATGCCGCCG CTTACGACTC GGCCGAAGGC TGGGAAACGC TCAAGAGCGA AATCAACGCC
TTTGCCGAAA GCGAAGGCCG CCGCCCGCGC GTGATGATTT CAAAACTCGG CCAGGACGGC
CATGACCGGG GAGCCAAGGT CGTGGCGACT GCATTTGCCG ACCTGGGTTT TGACGTGGAC
ATGGGGCCGC TGTTCCAGAC GCCCGAAGAA TGCGCCCGTC AGGCAATTGA AAACGACGTG
CATGCCGTGG GCGTGAGCAC GCTGGCCGCT GGTCACAAGA CGCTGGTTCC CGCCATCATT
GCCGAGCTTC AGCGCCAGGG CGCCGATGAC ATCATCGTCT TCGTCGGCGG CGTGATTCCC
CGGCAGGATT ACGAGATGCT GTATGACGCA GGCGTCAAGG GCATCTACGG ACCCGGCACG
CCGATTCCGG CCAGCGCCAA GGATGTGCTG GAGCAGATCA GGGCTGCCCT GAAGTGA
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| Protein sequence | MSSTPTPFNA ASLEAWAKSA AKSAPNGDLD ALNWQTPDGI SVKPLYTAED IKDLPYTNTL
PGFEPFIRGP QATMYAVRPW TIRQYAGFST AEESNAFYRK ALAAGGQGVS VAFDLATHRG
YDSDHPRVTG DVGKAGVAID SVEDMKILFD QIPLDKVSVS MTMNGAVLPV LAGYVVAAEE
QGVSQDKLSG TIQNDVLKEF MVRNTYIYPP APSMRIIGDI IEYTAQNMPK FNSISISGYH
MQEAGANQAL ELAFTLADGK EYVKTALGKG LDVDGFAGRL SFFWAVGMNF YLEVAKMRAA
RLLWCRIMKG FDAKNPKSLM LRTHCQTSGW SLTEQDPYNN VVRTTIEAMA AVFGGTQSLH
TNSFDEAIAL PTEFSARIAR NTQLIIQEET HITSVIDPWA GSYMMEKLTQ DMADAAWTLI
EEVEAMGGMV KAVDSGWAKL KIEAAAAEKQ ARIDSGKDVI VGVNKYKLKT EDAIESRDID
NVAVRDGQIE RLKAIRAQRD GAAVQAALDA LTQAAEGNSG NLLDLCIKAV RLRATVGEVS
DALEKVYGRH RADTQKVSGV YAAAYDSAEG WETLKSEINA FAESEGRRPR VMISKLGQDG
HDRGAKVVAT AFADLGFDVD MGPLFQTPEE CARQAIENDV HAVGVSTLAA GHKTLVPAII
AELQRQGADD IIVFVGGVIP RQDYEMLYDA GVKGIYGPGT PIPASAKDVL EQIRAALK
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