| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0726 |
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| Symbol | |
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| ID | 8322786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 735270 |
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| End bp | 736850 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644951861 |
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| Product | methylmalonyl-CoA mutase, large subunit |
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| Protein accession | YP_003109349 |
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| Protein GI | 256371525 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
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| TIGRFAM ID | [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCGACG ACGAGCGTCT CACCTCCTCA CACATCCCGA TCCGACGCGT CTATCGACCC
GAGGACCTCG CCGACCTCGA CTACGACCGG GACCTGGGCG ACCCAGGAAC CTTCCCCTTC
ACCCGAGGCA TCCACGCGGG GATGTACCGC GATCGCCCAT GGACGATGCG CCAGTATGCC
GGCTTCGGCA CCGCGGAGGC AACGAACGAG CGCTTCAAGT TCCTCCTCGA GGCTGGCCAA
ACGGGTCTCT CCGTCGCCTT CGACCTCCCC ACCCAGATGG GCTACGATGC TGATCACCCG
CGCGCGCACG GCGAGGTAGG GCGCGTCGGC GTCGCCATCT CGACCATCGA CGACATGCGC
CGCCTCTTCG CGGACATCCC CCTCGAGCGG GTGACGACCT CGATGACCAT CAACGCGACC
GCCTCAGTTC TCTTGCTGCT CTACGAACTC GTTGCCGAAG AGCAAGGGGT CGCACCGGAG
CACCTCCGAG GCACCATCCA GAACGACATC TTGAAGGAGT ACGTCGCCCG CGGCACCTAC
ATCTTCCCAC CTCGACCATC GATGCGGCTC GTCACCGACA CCTTCGCCTA CTGCGCCGAT
CGCCTGCCCC AGTGGAACAC GATCTCGATC TCCGGCTACC ACATCCGCGA GGCGGGCGCG
TCGGCGGCCC AAGAGATCGC GTTCACCATC GCCAACGGGA TCGCCTACGT CGACGCGGCG
CTCGCCGCCG GCCTCGACGT CGACACCTTC GCGCCGCGGC TCTCCTTCTT CTGGAACGCT
CACACCAACC TCTTCGAGGA GATCGCCAAG TTCCGAGCCG CTCGACGTAT CTGGGCTCAC
ATCATGCGCG AACGCTTCGG CGCGAGGTCC GAGCGGAGCT GGCTGATGCG CTTCCACACG
CAAACCGCAG GATCGGCCCT CACAGCCCAG CAGCCAGAGG TCAACATCGT CCGGGTCACC
CTCCAGGCAC TCTCCGCCGT GCTCGGGGGA ACCCAGAGCC TGCACACCAA CGGCTTCGAC
GAGGCGCTCG GCCTTCCGAC CGAACACGCC GCCAAGTTGG CACTGCGCAC CCAACAGGTG
CTCGCCCACG AGATCGGCGC GACCGACACG GTGGATCCGC TCGCCGGCTC GTACTACGTC
GAGGCCCTGA CCGATGCGGT CGAGGCCAGT GCACGCCACC TCATCGACGA GATCGATGCG
CGCGGTGGCG CGGTCGCCGC GATCGAACAG CAGTGGATGC AGGAGGAGAT CGAACGCTCC
GCCTACGAGG CCGCCACCGC CATCGACGAG GGTCGGACCA TCATCGTCGG CGTGAACCGC
TACCGCGAAC CAGAGCCAGA AGCCCCCGAG GTCTTCCCCA TCGACCCGGC CTTCCAGCGC
GACCAAGCCG CGCGGGTCCA ACGGTGGCGT CGTCACCGCG ACGCCGAGGC GCTCGCTGGC
ACCCTCGATG ACCTGGCCGC CACCGCCCGC GGCACCGGAA ACCTGCTCTA TCCCATGCGA
GCTGCACTCC GCGCTGGTGC GACCCTCGGC GAGGTCGCCG ACACCCTACG AGGAGTCTTC
GGCGAGTACG ACGGCTCGTA G
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| Protein sequence | MADDERLTSS HIPIRRVYRP EDLADLDYDR DLGDPGTFPF TRGIHAGMYR DRPWTMRQYA
GFGTAEATNE RFKFLLEAGQ TGLSVAFDLP TQMGYDADHP RAHGEVGRVG VAISTIDDMR
RLFADIPLER VTTSMTINAT ASVLLLLYEL VAEEQGVAPE HLRGTIQNDI LKEYVARGTY
IFPPRPSMRL VTDTFAYCAD RLPQWNTISI SGYHIREAGA SAAQEIAFTI ANGIAYVDAA
LAAGLDVDTF APRLSFFWNA HTNLFEEIAK FRAARRIWAH IMRERFGARS ERSWLMRFHT
QTAGSALTAQ QPEVNIVRVT LQALSAVLGG TQSLHTNGFD EALGLPTEHA AKLALRTQQV
LAHEIGATDT VDPLAGSYYV EALTDAVEAS ARHLIDEIDA RGGAVAAIEQ QWMQEEIERS
AYEAATAIDE GRTIIVGVNR YREPEPEAPE VFPIDPAFQR DQAARVQRWR RHRDAEALAG
TLDDLAATAR GTGNLLYPMR AALRAGATLG EVADTLRGVF GEYDGS
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